Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.28□□□□□ -2.04
HMG20AQ9NP66 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.28□□□□□ -2.04
HMG20AQ9NP66 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC2.28□□□□□ -2.04
HMG20AQ9NP66 AC087499.2-201ENST00000432861 149 ntBASIC2.28□□□□□ -2.04
HMG20AQ9NP66 AC090774.1-201ENST00000435925 246 ntBASIC2.28□□□□□ -2.04
HMG20AQ9NP66 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.28□□□□□ -2.04
HMG20AQ9NP66 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC2.28□□□□□ -2.04
HMG20AQ9NP66 RPL7P18-201ENST00000478965 734 ntBASIC2.28□□□□□ -2.04
HMG20AQ9NP66 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC2.28□□□□□ -2.04
HMG20AQ9NP66 HSPE1P23-201ENST00000509838 286 ntBASIC2.28□□□□□ -2.04
HMG20AQ9NP66 AC093281.2-201ENST00000510153 597 ntBASIC2.28□□□□□ -2.04
HMG20AQ9NP66 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC2.28□□□□□ -2.04
HMG20AQ9NP66 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC2.28□□□□□ -2.04
HMG20AQ9NP66 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.28□□□□□ -2.04
HMG20AQ9NP66 AP003467.2-201ENST00000520175 319 ntBASIC2.28□□□□□ -2.04
HMG20AQ9NP66 CASP1P1-201ENST00000526345 212 ntBASIC2.28□□□□□ -2.04
HMG20AQ9NP66 AP003497.1-201ENST00000528472 562 ntBASIC2.28□□□□□ -2.04
HMG20AQ9NP66 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.28□□□□□ -2.04
HMG20AQ9NP66 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.28□□□□□ -2.04
HMG20AQ9NP66 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.28□□□□□ -2.04
HMG20AQ9NP66 CYCSP39-201ENST00000565821 309 ntBASIC2.28□□□□□ -2.04
HMG20AQ9NP66 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC2.28□□□□□ -2.04
HMG20AQ9NP66 AL137843.1-201ENST00000605078 385 ntBASIC2.28□□□□□ -2.04
HMG20AQ9NP66 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC2.28□□□□□ -2.04
HMG20AQ9NP66 AL050303.3-201ENST00000613704 284 ntBASIC2.28□□□□□ -2.04
HMG20AQ9NP66 AC002550.2-201ENST00000621246 394 ntBASIC2.28□□□□□ -2.04
HMG20AQ9NP66 AC099654.7-201ENST00000635788 2127 ntBASIC2.28□□□□□ -2.04
HMG20AQ9NP66 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
HMG20AQ9NP66 CUL1P1-201ENST00000509510 2425 ntBASIC2.28□□□□□ -2.04
HMG20AQ9NP66 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.27□□□□□ -2.05
HMG20AQ9NP66 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
HMG20AQ9NP66 ZNF876P-202ENST00000398732 1485 ntBASIC2.27□□□□□ -2.05
HMG20AQ9NP66 AC011460.1-201ENST00000636268 1834 ntBASIC2.27□□□□□ -2.05
HMG20AQ9NP66 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
HMG20AQ9NP66 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
HMG20AQ9NP66 SNORA9-201ENST00000384215 133 ntBASIC2.27□□□□□ -2.05
HMG20AQ9NP66 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
HMG20AQ9NP66 PIGPP2-201ENST00000411569 458 ntBASIC2.27□□□□□ -2.05
HMG20AQ9NP66 AC080125.1-201ENST00000414888 684 ntBASIC2.27□□□□□ -2.05
HMG20AQ9NP66 TRBV24OR9-2-201ENST00000416632 435 ntBASIC2.27□□□□□ -2.05
HMG20AQ9NP66 RPL21P32-201ENST00000419877 477 ntBASIC2.27□□□□□ -2.05
HMG20AQ9NP66 AC092573.2-201ENST00000434546 243 ntBASIC2.27□□□□□ -2.05
HMG20AQ9NP66 AC084290.1-201ENST00000434995 374 ntBASIC2.27□□□□□ -2.05
HMG20AQ9NP66 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC2.27□□□□□ -2.05
HMG20AQ9NP66 AL135938.1-201ENST00000443141 297 ntBASIC2.27□□□□□ -2.05
HMG20AQ9NP66 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.27□□□□□ -2.05
HMG20AQ9NP66 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.27□□□□□ -2.05
HMG20AQ9NP66 snoU13.8-201ENST00000458890 104 ntBASIC2.27□□□□□ -2.05
HMG20AQ9NP66 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC2.27□□□□□ -2.05
HMG20AQ9NP66 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC2.27□□□□□ -2.05
HMG20AQ9NP66 AP001804.3-201ENST00000525146 880 ntBASIC2.27□□□□□ -2.05
HMG20AQ9NP66 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.27□□□□□ -2.05
HMG20AQ9NP66 AC007954.1-201ENST00000554198 494 ntBASIC2.27□□□□□ -2.05
HMG20AQ9NP66 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.27□□□□□ -2.05
HMG20AQ9NP66 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.27□□□□□ -2.05
HMG20AQ9NP66 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.27□□□□□ -2.05
HMG20AQ9NP66 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.27□□□□□ -2.05
HMG20AQ9NP66 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC2.27□□□□□ -2.05
HMG20AQ9NP66 AC009712.1-201ENST00000564938 316 ntBASIC2.27□□□□□ -2.05
HMG20AQ9NP66 AC105224.1-201ENST00000587055 421 ntBASIC2.27□□□□□ -2.05
HMG20AQ9NP66 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.27□□□□□ -2.05
HMG20AQ9NP66 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC2.27□□□□□ -2.05
HMG20AQ9NP66 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.27□□□□□ -2.05
HMG20AQ9NP66 HSPE1P7-201ENST00000604681 321 ntBASIC2.27□□□□□ -2.05
HMG20AQ9NP66 AL158211.4-201ENST00000606988 584 ntBASIC2.27□□□□□ -2.05
HMG20AQ9NP66 AC007349.4-201ENST00000608114 532 ntBASIC2.27□□□□□ -2.05
HMG20AQ9NP66 ZNF720P1-201ENST00000562403 1939 ntBASIC2.27□□□□□ -2.05
HMG20AQ9NP66 AC005539.1-201ENST00000443768 1479 ntBASIC2.26□□□□□ -2.05
HMG20AQ9NP66 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
HMG20AQ9NP66 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.26□□□□□ -2.05
HMG20AQ9NP66 AC011477.1-204ENST00000623416 1325 ntBASIC2.26□□□□□ -2.05
HMG20AQ9NP66 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
HMG20AQ9NP66 MIR208A-201ENST00000362287 71 ntBASIC2.26□□□□□ -2.05
HMG20AQ9NP66 RNU5E-8P-201ENST00000363502 116 ntBASIC2.26□□□□□ -2.05
HMG20AQ9NP66 RNU1-112P-201ENST00000364401 164 ntBASIC2.26□□□□□ -2.05
HMG20AQ9NP66 RNU6-744P-201ENST00000365557 107 ntBASIC2.26□□□□□ -2.05
HMG20AQ9NP66 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC2.26□□□□□ -2.05
HMG20AQ9NP66 RNU6-1316P-201ENST00000384242 108 ntBASIC2.26□□□□□ -2.05
HMG20AQ9NP66 MIR627-201ENST00000384979 97 ntBASIC2.26□□□□□ -2.05
HMG20AQ9NP66 RNA5SP252-201ENST00000391131 119 ntBASIC2.26□□□□□ -2.05
HMG20AQ9NP66 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
HMG20AQ9NP66 SNORA11-201ENST00000408789 128 ntBASIC2.26□□□□□ -2.05
HMG20AQ9NP66 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.26□□□□□ -2.05
HMG20AQ9NP66 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC2.26□□□□□ -2.05
HMG20AQ9NP66 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.26□□□□□ -2.05
HMG20AQ9NP66 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.26□□□□□ -2.05
HMG20AQ9NP66 WARS2P1-201ENST00000429678 537 ntBASIC2.26□□□□□ -2.05
HMG20AQ9NP66 CR769776.1-201ENST00000441254 787 ntBASIC2.26□□□□□ -2.05
HMG20AQ9NP66 AC011816.1-201ENST00000441346 546 ntBASIC2.26□□□□□ -2.05
HMG20AQ9NP66 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.26□□□□□ -2.05
HMG20AQ9NP66 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.26□□□□□ -2.05
HMG20AQ9NP66 AC011825.1-201ENST00000484967 388 ntBASIC2.26□□□□□ -2.05
HMG20AQ9NP66 FAM172BP-201ENST00000487497 1089 ntBASIC2.26□□□□□ -2.05
HMG20AQ9NP66 HMGB3P3-201ENST00000510526 400 ntBASIC2.26□□□□□ -2.05
HMG20AQ9NP66 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.26□□□□□ -2.05
HMG20AQ9NP66 MTCYBP43-201ENST00000513621 740 ntBASIC2.26□□□□□ -2.05
HMG20AQ9NP66 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.26□□□□□ -2.05
HMG20AQ9NP66 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.26□□□□□ -2.05
HMG20AQ9NP66 MTND2P32-201ENST00000521584 1038 ntBASIC2.26□□□□□ -2.05
HMG20AQ9NP66 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms