Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 CDR1-202ENST00000625883 1485 ntBASIC2.75□□□□□ -1.97
TM9SF3Q9HD45 MTND4P9-201ENST00000507819 1346 ntBASIC2.74□□□□□ -1.97
TM9SF3Q9HD45 CCT4P2-201ENST00000233836 1548 ntBASIC2.74□□□□□ -1.97
TM9SF3Q9HD45 RNU6-461P-201ENST00000364195 107 ntBASIC2.74□□□□□ -1.97
TM9SF3Q9HD45 U3.12-201ENST00000364498 214 ntBASIC2.74□□□□□ -1.97
TM9SF3Q9HD45 snoZ40.1-201ENST00000364540 72 ntBASIC2.74□□□□□ -1.97
TM9SF3Q9HD45 RNU6-741P-201ENST00000383889 107 ntBASIC2.74□□□□□ -1.97
TM9SF3Q9HD45 TAS2R15P-201ENST00000390674 928 ntBASIC2.74□□□□□ -1.97
TM9SF3Q9HD45 RNA5SP508-201ENST00000411327 119 ntBASIC2.74□□□□□ -1.97
TM9SF3Q9HD45 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.74□□□□□ -1.97
TM9SF3Q9HD45 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC2.74□□□□□ -1.97
TM9SF3Q9HD45 RPL36AP6-201ENST00000435770 321 ntBASIC2.74□□□□□ -1.97
TM9SF3Q9HD45 Z80107.1-201ENST00000436830 412 ntBASIC2.74□□□□□ -1.97
TM9SF3Q9HD45 MTND4P6-201ENST00000438297 472 ntBASIC2.74□□□□□ -1.97
TM9SF3Q9HD45 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.74□□□□□ -1.97
TM9SF3Q9HD45 snoU13.8-201ENST00000458890 104 ntBASIC2.74□□□□□ -1.97
TM9SF3Q9HD45 AC138853.1-201ENST00000503549 823 ntBASIC2.74□□□□□ -1.97
TM9SF3Q9HD45 MTCYBP17-201ENST00000503579 789 ntBASIC2.74□□□□□ -1.97
TM9SF3Q9HD45 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
TM9SF3Q9HD45 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC2.74□□□□□ -1.97
TM9SF3Q9HD45 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC2.74□□□□□ -1.97
TM9SF3Q9HD45 ELOCP31-201ENST00000540463 467 ntBASIC2.74□□□□□ -1.97
TM9SF3Q9HD45 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.74□□□□□ -1.97
TM9SF3Q9HD45 MIR3616-201ENST00000584070 92 ntBASIC2.74□□□□□ -1.97
TM9SF3Q9HD45 VN1R83P-201ENST00000595685 445 ntBASIC2.74□□□□□ -1.97
TM9SF3Q9HD45 AL158211.4-201ENST00000606988 584 ntBASIC2.74□□□□□ -1.97
TM9SF3Q9HD45 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC2.74□□□□□ -1.97
TM9SF3Q9HD45 AC243773.3-201ENST00000613270 256 ntBASIC2.74□□□□□ -1.97
TM9SF3Q9HD45 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.74□□□□□ -1.97
TM9SF3Q9HD45 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.74□□□□□ -1.97
TM9SF3Q9HD45 AC120349.2-201ENST00000625002 298 ntBASIC2.74□□□□□ -1.97
TM9SF3Q9HD45 AC243829.7-201ENST00000633081 225 ntBASIC2.74□□□□□ -1.97
TM9SF3Q9HD45 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
TM9SF3Q9HD45 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.74□□□□□ -1.97
TM9SF3Q9HD45 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.73□□□□□ -1.97
TM9SF3Q9HD45 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
TM9SF3Q9HD45 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC2.73□□□□□ -1.97
TM9SF3Q9HD45 SNORA36C-201ENST00000384289 132 ntBASIC2.73□□□□□ -1.97
TM9SF3Q9HD45 SNORD116-12-201ENST00000384468 92 ntBASIC2.73□□□□□ -1.97
TM9SF3Q9HD45 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.73□□□□□ -1.97
TM9SF3Q9HD45 AL513475.1-201ENST00000406602 315 ntBASIC2.73□□□□□ -1.97
TM9SF3Q9HD45 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC2.73□□□□□ -1.97
TM9SF3Q9HD45 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.73□□□□□ -1.97
TM9SF3Q9HD45 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.73□□□□□ -1.97
TM9SF3Q9HD45 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.73□□□□□ -1.97
TM9SF3Q9HD45 Z82210.1-201ENST00000440037 231 ntBASIC2.73□□□□□ -1.97
TM9SF3Q9HD45 MTCO1P53-201ENST00000441633 699 ntBASIC2.73□□□□□ -1.97
TM9SF3Q9HD45 ZNF736P11Y-201ENST00000442535 1213 ntBASIC2.73□□□□□ -1.97
TM9SF3Q9HD45 ZNF736P12Y-201ENST00000443152 1243 ntBASIC2.73□□□□□ -1.97
TM9SF3Q9HD45 ZNF736P4Y-201ENST00000454995 1243 ntBASIC2.73□□□□□ -1.97
TM9SF3Q9HD45 AP1S2P1-201ENST00000457344 379 ntBASIC2.73□□□□□ -1.97
TM9SF3Q9HD45 RN7SL297P-201ENST00000483161 293 ntBASIC2.73□□□□□ -1.97
TM9SF3Q9HD45 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.73□□□□□ -1.97
TM9SF3Q9HD45 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.73□□□□□ -1.97
TM9SF3Q9HD45 AC010376.1-201ENST00000522101 334 ntBASIC2.73□□□□□ -1.97
TM9SF3Q9HD45 AC021451.1-201ENST00000523498 1129 ntBASIC2.73□□□□□ -1.97
TM9SF3Q9HD45 ATP5F1P5-201ENST00000526403 760 ntBASIC2.73□□□□□ -1.97
TM9SF3Q9HD45 AC234778.2-201ENST00000566241 354 ntBASIC2.73□□□□□ -1.97
TM9SF3Q9HD45 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC2.73□□□□□ -1.97
TM9SF3Q9HD45 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.73□□□□□ -1.97
TM9SF3Q9HD45 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC2.73□□□□□ -1.97
TM9SF3Q9HD45 AC068313.1-201ENST00000604028 1008 ntBASIC2.73□□□□□ -1.97
TM9SF3Q9HD45 PART1_2.1-201ENST00000612397 250 ntBASIC2.73□□□□□ -1.97
TM9SF3Q9HD45 AC092608.2-201ENST00000624427 218 ntBASIC2.73□□□□□ -1.97
TM9SF3Q9HD45 AP003485.1-201ENST00000625093 753 ntBASIC2.73□□□□□ -1.97
TM9SF3Q9HD45 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.73□□□□□ -1.97
TM9SF3Q9HD45 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
TM9SF3Q9HD45 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.72□□□□□ -1.97
TM9SF3Q9HD45 AC109315.1-201ENST00000584143 1347 ntBASIC2.72□□□□□ -1.97
TM9SF3Q9HD45 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
TM9SF3Q9HD45 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.72□□□□□ -1.97
TM9SF3Q9HD45 MIR181A2-201ENST00000384863 110 ntBASIC2.72□□□□□ -1.97
TM9SF3Q9HD45 MIR512-1-201ENST00000384913 84 ntBASIC2.72□□□□□ -1.97
TM9SF3Q9HD45 SNORA40.2-201ENST00000390847 128 ntBASIC2.72□□□□□ -1.97
TM9SF3Q9HD45 U3.20-201ENST00000390909 217 ntBASIC2.72□□□□□ -1.97
TM9SF3Q9HD45 AL450338.1-201ENST00000407987 512 ntBASIC2.72□□□□□ -1.97
TM9SF3Q9HD45 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC2.72□□□□□ -1.97
TM9SF3Q9HD45 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.72□□□□□ -1.97
TM9SF3Q9HD45 GTF2IP20-201ENST00000431663 360 ntBASIC2.72□□□□□ -1.97
TM9SF3Q9HD45 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC2.72□□□□□ -1.97
TM9SF3Q9HD45 USP9YP22-201ENST00000438971 294 ntBASIC2.72□□□□□ -1.97
TM9SF3Q9HD45 PIGFP3-201ENST00000441918 722 ntBASIC2.72□□□□□ -1.97
TM9SF3Q9HD45 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
TM9SF3Q9HD45 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC2.72□□□□□ -1.97
TM9SF3Q9HD45 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC2.72□□□□□ -1.97
TM9SF3Q9HD45 AC109329.2-201ENST00000519658 482 ntBASIC2.72□□□□□ -1.97
TM9SF3Q9HD45 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.72□□□□□ -1.97
TM9SF3Q9HD45 LRRC6P1-201ENST00000532188 885 ntBASIC2.72□□□□□ -1.97
TM9SF3Q9HD45 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.72□□□□□ -1.97
TM9SF3Q9HD45 HPRT1P3-201ENST00000539521 576 ntBASIC2.72□□□□□ -1.97
TM9SF3Q9HD45 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC2.72□□□□□ -1.97
TM9SF3Q9HD45 AC091544.4-201ENST00000555268 342 ntBASIC2.72□□□□□ -1.97
TM9SF3Q9HD45 TRAV28-201ENST00000557548 323 ntBASIC2.72□□□□□ -1.97
TM9SF3Q9HD45 MIR5194-201ENST00000582634 120 ntBASIC2.72□□□□□ -1.97
TM9SF3Q9HD45 MIR3670-2-201ENST00000582974 65 ntBASIC2.72□□□□□ -1.97
TM9SF3Q9HD45 MIR3670-1-201ENST00000584160 65 ntBASIC2.72□□□□□ -1.97
TM9SF3Q9HD45 MIR3670-3-201ENST00000584855 65 ntBASIC2.72□□□□□ -1.97
TM9SF3Q9HD45 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.72□□□□□ -1.97
TM9SF3Q9HD45 MTND3P19-201ENST00000603825 345 ntBASIC2.72□□□□□ -1.97
TM9SF3Q9HD45 MIR3670-4-201ENST00000612260 65 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 132 ms