Protein–RNA interactions for Protein: Q9H444

CHMP4B, Charged multivesicular body protein 4b, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BQ9H444 AC119751.5-201ENST00000514077 770 ntBASIC2.56□□□□□ -2
CHMP4BQ9H444 RNU5A-7P-201ENST00000515979 116 ntBASIC2.56□□□□□ -2
CHMP4BQ9H444 SNORA48.10-201ENST00000516965 160 ntBASIC2.56□□□□□ -2
CHMP4BQ9H444 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.56□□□□□ -2
CHMP4BQ9H444 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.56□□□□□ -2
CHMP4BQ9H444 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.56□□□□□ -2
CHMP4BQ9H444 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC2.56□□□□□ -2
CHMP4BQ9H444 DUXAP9-208ENST00000622815 614 ntBASIC2.56□□□□□ -2
CHMP4BQ9H444 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.56□□□□□ -2
CHMP4BQ9H444 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
CHMP4BQ9H444 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CHMP4BQ9H444 Y_RNA.500-201ENST00000384466 111 ntBASIC2.55□□□□□ -2
CHMP4BQ9H444 AL355615.1-201ENST00000406187 641 ntBASIC2.55□□□□□ -2
CHMP4BQ9H444 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC2.55□□□□□ -2
CHMP4BQ9H444 EIF4EP4-201ENST00000424916 578 ntBASIC2.55□□□□□ -2
CHMP4BQ9H444 AIMP1P2-201ENST00000425294 312 ntBASIC2.55□□□□□ -2
CHMP4BQ9H444 AC236972.1-201ENST00000433225 199 ntBASIC2.55□□□□□ -2
CHMP4BQ9H444 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.55□□□□□ -2
CHMP4BQ9H444 AC007000.2-201ENST00000442564 487 ntBASIC2.55□□□□□ -2
CHMP4BQ9H444 RPL23AP7-203ENST00000449021 469 ntBASIC2.55□□□□□ -2
CHMP4BQ9H444 NDUFA5P7-201ENST00000452914 242 ntBASIC2.55□□□□□ -2
CHMP4BQ9H444 Z82190.1-201ENST00000454534 490 ntBASIC2.55□□□□□ -2
CHMP4BQ9H444 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.55□□□□□ -2
CHMP4BQ9H444 RPL9P6-201ENST00000492764 598 ntBASIC2.55□□□□□ -2
CHMP4BQ9H444 RNU2-44P-201ENST00000516795 194 ntBASIC2.55□□□□□ -2
CHMP4BQ9H444 RNU6-928P-201ENST00000516876 104 ntBASIC2.55□□□□□ -2
CHMP4BQ9H444 RNU6-798P-201ENST00000516912 103 ntBASIC2.55□□□□□ -2
CHMP4BQ9H444 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CHMP4BQ9H444 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.55□□□□□ -2
CHMP4BQ9H444 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.55□□□□□ -2
CHMP4BQ9H444 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC2.55□□□□□ -2
CHMP4BQ9H444 AC092954.1-201ENST00000609121 445 ntBASIC2.55□□□□□ -2
CHMP4BQ9H444 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
CHMP4BQ9H444 AC009487.4-201ENST00000624969 3585 ntBASIC2.55□□□□□ -2
CHMP4BQ9H444 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.54□□□□□ -2
CHMP4BQ9H444 RNA5SP160-201ENST00000364866 120 ntBASIC2.54□□□□□ -2
CHMP4BQ9H444 RPS3AP24-201ENST00000407896 734 ntBASIC2.54□□□□□ -2
CHMP4BQ9H444 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.54□□□□□ -2
CHMP4BQ9H444 RN7SKP223-201ENST00000410582 62 ntBASIC2.54□□□□□ -2
CHMP4BQ9H444 HMGB1P49-201ENST00000418882 569 ntBASIC2.54□□□□□ -2
CHMP4BQ9H444 AL445646.1-201ENST00000431784 216 ntBASIC2.54□□□□□ -2
CHMP4BQ9H444 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.54□□□□□ -2
CHMP4BQ9H444 AL500527.1-201ENST00000448532 255 ntBASIC2.54□□□□□ -2
CHMP4BQ9H444 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.54□□□□□ -2
CHMP4BQ9H444 UBE2DNL-203ENST00000474922 222 ntBASIC2.54□□□□□ -2
CHMP4BQ9H444 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.54□□□□□ -2
CHMP4BQ9H444 RNU7-193P-201ENST00000516723 65 ntBASIC2.54□□□□□ -2
CHMP4BQ9H444 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.54□□□□□ -2
CHMP4BQ9H444 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC2.54□□□□□ -2
CHMP4BQ9H444 AC124293.1-201ENST00000530034 493 ntBASIC2.54□□□□□ -2
CHMP4BQ9H444 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.54□□□□□ -2
CHMP4BQ9H444 AC007229.1-201ENST00000590455 412 ntBASIC2.54□□□□□ -2
CHMP4BQ9H444 AC013444.2-201ENST00000603317 787 ntBASIC2.54□□□□□ -2
CHMP4BQ9H444 RMST_10.1-201ENST00000616309 154 ntBASIC2.54□□□□□ -2
CHMP4BQ9H444 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
CHMP4BQ9H444 AC098657.3-201ENST00000620434 263 ntBASIC2.54□□□□□ -2
CHMP4BQ9H444 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
CHMP4BQ9H444 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.53□□□□□ -2
CHMP4BQ9H444 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC2.53□□□□□ -2
CHMP4BQ9H444 HSPE1P11-201ENST00000339579 310 ntBASIC2.53□□□□□ -2
CHMP4BQ9H444 RNU6-270P-201ENST00000364131 105 ntBASIC2.53□□□□□ -2
CHMP4BQ9H444 CIR1P3-201ENST00000405137 479 ntBASIC2.53□□□□□ -2
CHMP4BQ9H444 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.53□□□□□ -2
CHMP4BQ9H444 AC027124.2-201ENST00000428249 105 ntBASIC2.53□□□□□ -2
CHMP4BQ9H444 AL139415.2-201ENST00000431968 163 ntBASIC2.53□□□□□ -2
CHMP4BQ9H444 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.53□□□□□ -2
CHMP4BQ9H444 AC024082.2-201ENST00000434771 238 ntBASIC2.53□□□□□ -2
CHMP4BQ9H444 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.53□□□□□ -2
CHMP4BQ9H444 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC2.53□□□□□ -2
CHMP4BQ9H444 USP9YP8-201ENST00000441913 500 ntBASIC2.53□□□□□ -2
CHMP4BQ9H444 AC124916.1-201ENST00000444020 547 ntBASIC2.53□□□□□ -2
CHMP4BQ9H444 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.53□□□□□ -2
CHMP4BQ9H444 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.53□□□□□ -2
CHMP4BQ9H444 AC091965.2-201ENST00000512324 613 ntBASIC2.53□□□□□ -2
CHMP4BQ9H444 OR5AK1P-201ENST00000524837 922 ntBASIC2.53□□□□□ -2
CHMP4BQ9H444 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC2.53□□□□□ -2
CHMP4BQ9H444 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.53□□□□□ -2
CHMP4BQ9H444 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.53□□□□□ -2
CHMP4BQ9H444 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC2.53□□□□□ -2
CHMP4BQ9H444 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.53□□□□□ -2
CHMP4BQ9H444 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.53□□□□□ -2
CHMP4BQ9H444 AC004908.2-201ENST00000609090 574 ntBASIC2.53□□□□□ -2
CHMP4BQ9H444 AC103710.1-201ENST00000610003 901 ntBASIC2.53□□□□□ -2
CHMP4BQ9H444 AC005296.1-201ENST00000616145 209 ntBASIC2.53□□□□□ -2
CHMP4BQ9H444 AL136981.2-201ENST00000617319 734 ntBASIC2.53□□□□□ -2
CHMP4BQ9H444 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC2.53□□□□□ -2
CHMP4BQ9H444 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
CHMP4BQ9H444 RNU6-115P-201ENST00000364310 107 ntBASIC2.52□□□□□ -2.01
CHMP4BQ9H444 RNA5SP138-201ENST00000365098 114 ntBASIC2.52□□□□□ -2.01
CHMP4BQ9H444 SNORA51.6-201ENST00000384151 125 ntBASIC2.52□□□□□ -2.01
CHMP4BQ9H444 SNORA3.2-201ENST00000408221 125 ntBASIC2.52□□□□□ -2.01
CHMP4BQ9H444 RN7SKP32-201ENST00000410167 303 ntBASIC2.52□□□□□ -2.01
CHMP4BQ9H444 RNU2-15P-201ENST00000410692 191 ntBASIC2.52□□□□□ -2.01
CHMP4BQ9H444 AL356867.1-201ENST00000429623 299 ntBASIC2.52□□□□□ -2.01
CHMP4BQ9H444 MTND5P8-201ENST00000449817 1083 ntBASIC2.52□□□□□ -2.01
CHMP4BQ9H444 RPL23AP41-201ENST00000484754 458 ntBASIC2.52□□□□□ -2.01
CHMP4BQ9H444 AC109471.1-201ENST00000511631 612 ntBASIC2.52□□□□□ -2.01
CHMP4BQ9H444 AC118465.1-201ENST00000513820 1271 ntBASIC2.52□□□□□ -2.01
CHMP4BQ9H444 RNA5SP364-201ENST00000516938 78 ntBASIC2.52□□□□□ -2.01
CHMP4BQ9H444 FAM92A1P1-201ENST00000528023 890 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms