Protein–RNA interactions for Protein: Q9H3E2

SNX25, Sorting nexin-25, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25Q9H3E2 AC019226.1-201ENST00000625666 515 ntBASIC3.2□□□□□ -1.9
SNX25Q9H3E2 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.2□□□□□ -1.9
SNX25Q9H3E2 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
SNX25Q9H3E2 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.2□□□□□ -1.9
SNX25Q9H3E2 AL138713.1-201ENST00000624026 2130 ntBASIC3.2□□□□□ -1.9
SNX25Q9H3E2 AL136164.4-201ENST00000625013 2135 ntBASIC3.2□□□□□ -1.9
SNX25Q9H3E2 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
SNX25Q9H3E2 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
SNX25Q9H3E2 AC073325.2-201ENST00000339545 159 ntBASIC3.19□□□□□ -1.9
SNX25Q9H3E2 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SNX25Q9H3E2 MIR493-201ENST00000385254 89 ntBASIC3.19□□□□□ -1.9
SNX25Q9H3E2 U8.14-201ENST00000390843 143 ntBASIC3.19□□□□□ -1.9
SNX25Q9H3E2 RPL21P3-201ENST00000395517 478 ntBASIC3.19□□□□□ -1.9
SNX25Q9H3E2 RPL5P18-201ENST00000406671 891 ntBASIC3.19□□□□□ -1.9
SNX25Q9H3E2 CCNG1P1-201ENST00000406783 885 ntBASIC3.19□□□□□ -1.9
SNX25Q9H3E2 AC078974.1-201ENST00000411597 223 ntBASIC3.19□□□□□ -1.9
SNX25Q9H3E2 AC096664.2-201ENST00000411843 406 ntBASIC3.19□□□□□ -1.9
SNX25Q9H3E2 AC245054.2-201ENST00000415639 319 ntBASIC3.19□□□□□ -1.9
SNX25Q9H3E2 RPS27AP14-201ENST00000422868 454 ntBASIC3.19□□□□□ -1.9
SNX25Q9H3E2 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.19□□□□□ -1.9
SNX25Q9H3E2 AL365184.2-201ENST00000431139 435 ntBASIC3.19□□□□□ -1.9
SNX25Q9H3E2 CETN4P-201ENST00000432407 469 ntBASIC3.19□□□□□ -1.9
SNX25Q9H3E2 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.19□□□□□ -1.9
SNX25Q9H3E2 RPL37P21-201ENST00000435890 276 ntBASIC3.19□□□□□ -1.9
SNX25Q9H3E2 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.19□□□□□ -1.9
SNX25Q9H3E2 EPS15P1-201ENST00000448836 336 ntBASIC3.19□□□□□ -1.9
SNX25Q9H3E2 ZNF114P1-201ENST00000453500 292 ntBASIC3.19□□□□□ -1.9
SNX25Q9H3E2 MTCO1P42-201ENST00000457379 726 ntBASIC3.19□□□□□ -1.9
SNX25Q9H3E2 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.19□□□□□ -1.9
SNX25Q9H3E2 AC146507.2-201ENST00000460608 476 ntBASIC3.19□□□□□ -1.9
SNX25Q9H3E2 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC3.19□□□□□ -1.9
SNX25Q9H3E2 AC055855.1-201ENST00000489563 579 ntBASIC3.19□□□□□ -1.9
SNX25Q9H3E2 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.19□□□□□ -1.9
SNX25Q9H3E2 ERHP1-201ENST00000523006 310 ntBASIC3.19□□□□□ -1.9
SNX25Q9H3E2 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.19□□□□□ -1.9
SNX25Q9H3E2 MRPS36P5-201ENST00000551909 298 ntBASIC3.19□□□□□ -1.9
SNX25Q9H3E2 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.19□□□□□ -1.9
SNX25Q9H3E2 PCMTD1P2-201ENST00000565017 355 ntBASIC3.19□□□□□ -1.9
SNX25Q9H3E2 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.19□□□□□ -1.9
SNX25Q9H3E2 AL451007.1-201ENST00000595491 289 ntBASIC3.19□□□□□ -1.9
SNX25Q9H3E2 AC078899.3-201ENST00000599065 212 ntBASIC3.19□□□□□ -1.9
SNX25Q9H3E2 AP002826.1-201ENST00000608835 315 ntBASIC3.19□□□□□ -1.9
SNX25Q9H3E2 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.19□□□□□ -1.9
SNX25Q9H3E2 AL355472.4-201ENST00000610233 626 ntBASIC3.19□□□□□ -1.9
SNX25Q9H3E2 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC3.19□□□□□ -1.9
SNX25Q9H3E2 Z99129.2-201ENST00000619967 314 ntBASIC3.19□□□□□ -1.9
SNX25Q9H3E2 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.19□□□□□ -1.9
SNX25Q9H3E2 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.19□□□□□ -1.9
SNX25Q9H3E2 AC012321.1-201ENST00000561622 1588 ntBASIC3.19□□□□□ -1.9
SNX25Q9H3E2 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SNX25Q9H3E2 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
SNX25Q9H3E2 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
SNX25Q9H3E2 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.19□□□□□ -1.9
SNX25Q9H3E2 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.19□□□□□ -1.9
SNX25Q9H3E2 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
SNX25Q9H3E2 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
SNX25Q9H3E2 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SNX25Q9H3E2 API5P2-201ENST00000397055 1498 ntBASIC3.18□□□□□ -1.9
SNX25Q9H3E2 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.18□□□□□ -1.9
SNX25Q9H3E2 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.18□□□□□ -1.9
SNX25Q9H3E2 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
SNX25Q9H3E2 RNU6-501P-201ENST00000364072 100 ntBASIC3.18□□□□□ -1.9
SNX25Q9H3E2 MIR19A-201ENST00000384878 82 ntBASIC3.18□□□□□ -1.9
SNX25Q9H3E2 AC109780.2-201ENST00000413467 845 ntBASIC3.18□□□□□ -1.9
SNX25Q9H3E2 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.18□□□□□ -1.9
SNX25Q9H3E2 AC233728.2-201ENST00000425348 757 ntBASIC3.18□□□□□ -1.9
SNX25Q9H3E2 AL592447.1-201ENST00000447592 540 ntBASIC3.18□□□□□ -1.9
SNX25Q9H3E2 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.18□□□□□ -1.9
SNX25Q9H3E2 RPS27AP1-201ENST00000475545 471 ntBASIC3.18□□□□□ -1.9
SNX25Q9H3E2 RPL31P60-201ENST00000478450 367 ntBASIC3.18□□□□□ -1.9
SNX25Q9H3E2 AC011825.1-201ENST00000484967 388 ntBASIC3.18□□□□□ -1.9
SNX25Q9H3E2 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC3.18□□□□□ -1.9
SNX25Q9H3E2 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
SNX25Q9H3E2 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.18□□□□□ -1.9
SNX25Q9H3E2 SCGB1D5P-201ENST00000515134 247 ntBASIC3.18□□□□□ -1.9
SNX25Q9H3E2 RNU6-1003P-201ENST00000517099 105 ntBASIC3.18□□□□□ -1.9
SNX25Q9H3E2 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.18□□□□□ -1.9
SNX25Q9H3E2 AKIRIN1P1-201ENST00000547384 544 ntBASIC3.18□□□□□ -1.9
SNX25Q9H3E2 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC3.18□□□□□ -1.9
SNX25Q9H3E2 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.18□□□□□ -1.9
SNX25Q9H3E2 AC055876.1-202ENST00000567053 138 ntBASIC3.18□□□□□ -1.9
SNX25Q9H3E2 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.18□□□□□ -1.9
SNX25Q9H3E2 MIR3921-201ENST00000577308 85 ntBASIC3.18□□□□□ -1.9
SNX25Q9H3E2 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC3.18□□□□□ -1.9
SNX25Q9H3E2 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.18□□□□□ -1.9
SNX25Q9H3E2 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.18□□□□□ -1.9
SNX25Q9H3E2 AL109653.1-201ENST00000603091 248 ntBASIC3.18□□□□□ -1.9
SNX25Q9H3E2 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.18□□□□□ -1.9
SNX25Q9H3E2 AP000254.1-201ENST00000609934 520 ntBASIC3.18□□□□□ -1.9
SNX25Q9H3E2 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.18□□□□□ -1.9
SNX25Q9H3E2 AC135507.2-201ENST00000612443 309 ntBASIC3.18□□□□□ -1.9
SNX25Q9H3E2 AC093838.1-201ENST00000613014 469 ntBASIC3.18□□□□□ -1.9
SNX25Q9H3E2 AC090132.2-201ENST00000615881 347 ntBASIC3.18□□□□□ -1.9
SNX25Q9H3E2 AC112204.3-201ENST00000623822 332 ntBASIC3.18□□□□□ -1.9
SNX25Q9H3E2 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.18□□□□□ -1.9
SNX25Q9H3E2 AC005832.2-201ENST00000538921 1430 ntBASIC3.18□□□□□ -1.9
SNX25Q9H3E2 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.17□□□□□ -1.9
SNX25Q9H3E2 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.17□□□□□ -1.9
SNX25Q9H3E2 AC008264.2-201ENST00000610193 3731 ntBASIC3.17□□□□□ -1.9
SNX25Q9H3E2 AC090740.1-201ENST00000623193 2262 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 159.1 ms