Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.75□□□□□ -1.65
FOXP3Q9BZS1 ZNF807-201ENST00000328088 1707 ntBASIC4.75□□□□□ -1.65
FOXP3Q9BZS1 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
FOXP3Q9BZS1 XIAPP3-201ENST00000312918 795 ntBASIC4.75□□□□□ -1.65
FOXP3Q9BZS1 SNORD3E-201ENST00000362899 217 ntBASIC4.75□□□□□ -1.65
FOXP3Q9BZS1 SNORA75B-201ENST00000384053 137 ntBASIC4.75□□□□□ -1.65
FOXP3Q9BZS1 RNU6-505P-201ENST00000384427 107 ntBASIC4.75□□□□□ -1.65
FOXP3Q9BZS1 MT-TG-201ENST00000387429 68 ntBASIC4.75□□□□□ -1.65
FOXP3Q9BZS1 MIR298-201ENST00000401212 88 ntBASIC4.75□□□□□ -1.65
FOXP3Q9BZS1 RPL21P24-201ENST00000413752 448 ntBASIC4.75□□□□□ -1.65
FOXP3Q9BZS1 AC114482.1-201ENST00000418010 247 ntBASIC4.75□□□□□ -1.65
FOXP3Q9BZS1 NUP35P1-201ENST00000422734 947 ntBASIC4.75□□□□□ -1.65
FOXP3Q9BZS1 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC4.75□□□□□ -1.65
FOXP3Q9BZS1 RPL30P3-201ENST00000424262 333 ntBASIC4.75□□□□□ -1.65
FOXP3Q9BZS1 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.75□□□□□ -1.65
FOXP3Q9BZS1 AL160004.2-201ENST00000432935 350 ntBASIC4.75□□□□□ -1.65
FOXP3Q9BZS1 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC4.75□□□□□ -1.65
FOXP3Q9BZS1 H2AFZP5-201ENST00000446960 382 ntBASIC4.75□□□□□ -1.65
FOXP3Q9BZS1 AC104058.1-201ENST00000448028 297 ntBASIC4.75□□□□□ -1.65
FOXP3Q9BZS1 TPT1P12-201ENST00000448968 492 ntBASIC4.75□□□□□ -1.65
FOXP3Q9BZS1 BX276092.4-201ENST00000452056 248 ntBASIC4.75□□□□□ -1.65
FOXP3Q9BZS1 HMGB3P21-201ENST00000452483 547 ntBASIC4.75□□□□□ -1.65
FOXP3Q9BZS1 AURKAPS2-201ENST00000454983 333 ntBASIC4.75□□□□□ -1.65
FOXP3Q9BZS1 AC007967.1-201ENST00000455422 1159 ntBASIC4.75□□□□□ -1.65
FOXP3Q9BZS1 DHFRP3-201ENST00000455595 559 ntBASIC4.75□□□□□ -1.65
FOXP3Q9BZS1 RPL12P20-201ENST00000475538 479 ntBASIC4.75□□□□□ -1.65
FOXP3Q9BZS1 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC4.75□□□□□ -1.65
FOXP3Q9BZS1 MEPE-206ENST00000511670 550 ntTSL 4 BASIC4.75□□□□□ -1.65
FOXP3Q9BZS1 SNORA25.10-201ENST00000515926 124 ntBASIC4.75□□□□□ -1.65
FOXP3Q9BZS1 AC008694.2-201ENST00000517591 306 ntBASIC4.75□□□□□ -1.65
FOXP3Q9BZS1 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.75□□□□□ -1.65
FOXP3Q9BZS1 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC4.75□□□□□ -1.65
FOXP3Q9BZS1 AC010680.4-201ENST00000605334 543 ntBASIC4.75□□□□□ -1.65
FOXP3Q9BZS1 AC009570.1-201ENST00000609599 745 ntBASIC4.75□□□□□ -1.65
FOXP3Q9BZS1 SNHG22-203ENST00000617833 660 ntBASIC4.75□□□□□ -1.65
FOXP3Q9BZS1 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.75□□□□□ -1.65
FOXP3Q9BZS1 AC090337.1-201ENST00000579651 2074 ntBASIC4.75□□□□□ -1.65
FOXP3Q9BZS1 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
FOXP3Q9BZS1 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
FOXP3Q9BZS1 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.75□□□□□ -1.65
FOXP3Q9BZS1 AC125257.1-201ENST00000560400 2930 ntBASIC4.75□□□□□ -1.65
FOXP3Q9BZS1 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
FOXP3Q9BZS1 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
FOXP3Q9BZS1 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
FOXP3Q9BZS1 MTND5P30-201ENST00000452896 1731 ntBASIC4.75□□□□□ -1.65
FOXP3Q9BZS1 A2MP1-204ENST00000566278 4130 ntBASIC4.74□□□□□ -1.65
FOXP3Q9BZS1 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
FOXP3Q9BZS1 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
FOXP3Q9BZS1 AL137003.2-201ENST00000606924 2538 ntBASIC4.74□□□□□ -1.65
FOXP3Q9BZS1 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
FOXP3Q9BZS1 RNU6-562P-201ENST00000362731 107 ntBASIC4.74□□□□□ -1.65
FOXP3Q9BZS1 Y_RNA.149-201ENST00000363558 117 ntBASIC4.74□□□□□ -1.65
FOXP3Q9BZS1 RNA5SP28-201ENST00000363841 119 ntBASIC4.74□□□□□ -1.65
FOXP3Q9BZS1 Y_RNA.252-201ENST00000364556 101 ntBASIC4.74□□□□□ -1.65
FOXP3Q9BZS1 SNORA62-201ENST00000365493 153 ntBASIC4.74□□□□□ -1.65
FOXP3Q9BZS1 SMIM11P1-201ENST00000369586 178 ntBASIC4.74□□□□□ -1.65
FOXP3Q9BZS1 RNU6-946P-201ENST00000383878 107 ntBASIC4.74□□□□□ -1.65
FOXP3Q9BZS1 Y_RNA.399-201ENST00000383955 105 ntBASIC4.74□□□□□ -1.65
FOXP3Q9BZS1 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.74□□□□□ -1.65
FOXP3Q9BZS1 RPL23AP25-201ENST00000430973 463 ntBASIC4.74□□□□□ -1.65
FOXP3Q9BZS1 AC079168.2-201ENST00000453977 416 ntBASIC4.74□□□□□ -1.65
FOXP3Q9BZS1 RN7SL385P-201ENST00000468873 276 ntBASIC4.74□□□□□ -1.65
FOXP3Q9BZS1 AC083829.1-201ENST00000503756 657 ntBASIC4.74□□□□□ -1.65
FOXP3Q9BZS1 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
FOXP3Q9BZS1 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.74□□□□□ -1.65
FOXP3Q9BZS1 AC091868.1-201ENST00000508746 304 ntBASIC4.74□□□□□ -1.65
FOXP3Q9BZS1 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.74□□□□□ -1.65
FOXP3Q9BZS1 AC005798.1-201ENST00000513715 387 ntBASIC4.74□□□□□ -1.65
FOXP3Q9BZS1 RN7SKP277-201ENST00000516895 283 ntBASIC4.74□□□□□ -1.65
FOXP3Q9BZS1 IGKV2D-36-201ENST00000518643 226 ntBASIC4.74□□□□□ -1.65
FOXP3Q9BZS1 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.74□□□□□ -1.65
FOXP3Q9BZS1 AC008269.2-201ENST00000561915 1105 ntBASIC4.74□□□□□ -1.65
FOXP3Q9BZS1 AC106782.4-201ENST00000568264 210 ntBASIC4.74□□□□□ -1.65
FOXP3Q9BZS1 AC010653.1-201ENST00000571108 881 ntBASIC4.74□□□□□ -1.65
FOXP3Q9BZS1 HNRNPCP4-201ENST00000571636 900 ntBASIC4.74□□□□□ -1.65
FOXP3Q9BZS1 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC4.74□□□□□ -1.65
FOXP3Q9BZS1 AL355812.1-201ENST00000603215 216 ntBASIC4.74□□□□□ -1.65
FOXP3Q9BZS1 AL355598.1-201ENST00000604169 202 ntBASIC4.74□□□□□ -1.65
FOXP3Q9BZS1 FAM27B-201ENST00000610601 213 ntBASIC4.74□□□□□ -1.65
FOXP3Q9BZS1 U4.1-201ENST00000620349 87 ntBASIC4.74□□□□□ -1.65
FOXP3Q9BZS1 AC091905.2-201ENST00000623143 306 ntBASIC4.74□□□□□ -1.65
FOXP3Q9BZS1 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
FOXP3Q9BZS1 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
FOXP3Q9BZS1 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
FOXP3Q9BZS1 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.74□□□□□ -1.65
FOXP3Q9BZS1 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
FOXP3Q9BZS1 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.74□□□□□ -1.65
FOXP3Q9BZS1 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.74□□□□□ -1.65
FOXP3Q9BZS1 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.73□□□□□ -1.65
FOXP3Q9BZS1 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
FOXP3Q9BZS1 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
FOXP3Q9BZS1 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.73□□□□□ -1.65
FOXP3Q9BZS1 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
FOXP3Q9BZS1 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.73□□□□□ -1.65
FOXP3Q9BZS1 PNPT1P2-201ENST00000456768 2050 ntBASIC4.73□□□□□ -1.65
FOXP3Q9BZS1 RNA5SP151-201ENST00000365632 117 ntBASIC4.73□□□□□ -1.65
FOXP3Q9BZS1 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
FOXP3Q9BZS1 RNU6-890P-201ENST00000384121 107 ntBASIC4.73□□□□□ -1.65
FOXP3Q9BZS1 Y_RNA.463-201ENST00000384271 102 ntBASIC4.73□□□□□ -1.65
FOXP3Q9BZS1 AL445189.1-201ENST00000405722 338 ntBASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms