Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 AL138960.2-201ENST00000625145 535 ntBASIC2.87□□□□□ -1.95
RPAP1Q9BWH6 AC241585.2-209ENST00000638217 143 ntBASIC2.87□□□□□ -1.95
RPAP1Q9BWH6 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
RPAP1Q9BWH6 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.86□□□□□ -1.95
RPAP1Q9BWH6 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
RPAP1Q9BWH6 Y_RNA.408-201ENST00000383987 102 ntBASIC2.86□□□□□ -1.95
RPAP1Q9BWH6 RNU1-138P-201ENST00000384093 164 ntBASIC2.86□□□□□ -1.95
RPAP1Q9BWH6 SNORA40.2-201ENST00000390847 128 ntBASIC2.86□□□□□ -1.95
RPAP1Q9BWH6 AL592310.1-201ENST00000414330 671 ntBASIC2.86□□□□□ -1.95
RPAP1Q9BWH6 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.86□□□□□ -1.95
RPAP1Q9BWH6 BX682237.1-201ENST00000415016 335 ntBASIC2.86□□□□□ -1.95
RPAP1Q9BWH6 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC2.86□□□□□ -1.95
RPAP1Q9BWH6 SRIP2-201ENST00000428470 166 ntBASIC2.86□□□□□ -1.95
RPAP1Q9BWH6 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC2.86□□□□□ -1.95
RPAP1Q9BWH6 MTND2P20-201ENST00000440805 661 ntBASIC2.86□□□□□ -1.95
RPAP1Q9BWH6 UBBP3-201ENST00000445497 241 ntBASIC2.86□□□□□ -1.95
RPAP1Q9BWH6 TRGVB-201ENST00000453257 471 ntBASIC2.86□□□□□ -1.95
RPAP1Q9BWH6 AL359385.1-201ENST00000456509 365 ntBASIC2.86□□□□□ -1.95
RPAP1Q9BWH6 AC108210.2-201ENST00000503681 201 ntBASIC2.86□□□□□ -1.95
RPAP1Q9BWH6 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.86□□□□□ -1.95
RPAP1Q9BWH6 AC092436.1-201ENST00000506450 503 ntBASIC2.86□□□□□ -1.95
RPAP1Q9BWH6 AC114322.1-201ENST00000506771 926 ntBASIC2.86□□□□□ -1.95
RPAP1Q9BWH6 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.86□□□□□ -1.95
RPAP1Q9BWH6 RNU6-991P-201ENST00000516168 107 ntBASIC2.86□□□□□ -1.95
RPAP1Q9BWH6 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.86□□□□□ -1.95
RPAP1Q9BWH6 AC022861.1-201ENST00000522981 663 ntBASIC2.86□□□□□ -1.95
RPAP1Q9BWH6 AC015712.3-201ENST00000559380 164 ntBASIC2.86□□□□□ -1.95
RPAP1Q9BWH6 MTND3P13-201ENST00000574391 343 ntBASIC2.86□□□□□ -1.95
RPAP1Q9BWH6 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.86□□□□□ -1.95
RPAP1Q9BWH6 DUXAP11-201ENST00000603858 526 ntBASIC2.86□□□□□ -1.95
RPAP1Q9BWH6 AP002826.1-201ENST00000608835 315 ntBASIC2.86□□□□□ -1.95
RPAP1Q9BWH6 AC243773.3-201ENST00000613270 256 ntBASIC2.86□□□□□ -1.95
RPAP1Q9BWH6 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.86□□□□□ -1.95
RPAP1Q9BWH6 FO624990.1-201ENST00000636373 85 ntBASIC2.86□□□□□ -1.95
RPAP1Q9BWH6 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.86□□□□□ -1.95
RPAP1Q9BWH6 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
RPAP1Q9BWH6 AC009812.4-201ENST00000569134 1805 ntBASIC2.85□□□□□ -1.95
RPAP1Q9BWH6 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
RPAP1Q9BWH6 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.85□□□□□ -1.95
RPAP1Q9BWH6 RNU1-51P-201ENST00000365345 176 ntBASIC2.85□□□□□ -1.95
RPAP1Q9BWH6 DHFRP6-201ENST00000401776 268 ntBASIC2.85□□□□□ -1.95
RPAP1Q9BWH6 MIR1289-2-201ENST00000408360 111 ntBASIC2.85□□□□□ -1.95
RPAP1Q9BWH6 RNA5SP38-201ENST00000410750 119 ntBASIC2.85□□□□□ -1.95
RPAP1Q9BWH6 RN7SKP140-201ENST00000411196 284 ntBASIC2.85□□□□□ -1.95
RPAP1Q9BWH6 Z75741.2-201ENST00000417272 1167 ntBASIC2.85□□□□□ -1.95
RPAP1Q9BWH6 AL449283.1-202ENST00000418249 604 ntBASIC2.85□□□□□ -1.95
RPAP1Q9BWH6 DPH3P2-201ENST00000422618 250 ntBASIC2.85□□□□□ -1.95
RPAP1Q9BWH6 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC2.85□□□□□ -1.95
RPAP1Q9BWH6 AL591806.2-201ENST00000433122 173 ntBASIC2.85□□□□□ -1.95
RPAP1Q9BWH6 AC098826.1-201ENST00000433943 471 ntBASIC2.85□□□□□ -1.95
RPAP1Q9BWH6 AC024082.2-201ENST00000434771 238 ntBASIC2.85□□□□□ -1.95
RPAP1Q9BWH6 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC2.85□□□□□ -1.95
RPAP1Q9BWH6 AC018634.1-201ENST00000437554 401 ntBASIC2.85□□□□□ -1.95
RPAP1Q9BWH6 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC2.85□□□□□ -1.95
RPAP1Q9BWH6 AL121871.1-201ENST00000443413 436 ntBASIC2.85□□□□□ -1.95
RPAP1Q9BWH6 Z96811.1-201ENST00000445880 108 ntBASIC2.85□□□□□ -1.95
RPAP1Q9BWH6 AC104058.1-201ENST00000448028 297 ntBASIC2.85□□□□□ -1.95
RPAP1Q9BWH6 AC113347.3-201ENST00000509113 148 ntBASIC2.85□□□□□ -1.95
RPAP1Q9BWH6 AC026436.1-201ENST00000510537 270 ntBASIC2.85□□□□□ -1.95
RPAP1Q9BWH6 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC2.85□□□□□ -1.95
RPAP1Q9BWH6 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC2.85□□□□□ -1.95
RPAP1Q9BWH6 SLC2A13P1-201ENST00000531560 322 ntBASIC2.85□□□□□ -1.95
RPAP1Q9BWH6 AC021269.2-201ENST00000532318 330 ntBASIC2.85□□□□□ -1.95
RPAP1Q9BWH6 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.85□□□□□ -1.95
RPAP1Q9BWH6 MIR5007-201ENST00000583098 95 ntBASIC2.85□□□□□ -1.95
RPAP1Q9BWH6 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC2.85□□□□□ -1.95
RPAP1Q9BWH6 DUXAP4-201ENST00000603046 613 ntBASIC2.85□□□□□ -1.95
RPAP1Q9BWH6 AC013444.2-201ENST00000603317 787 ntBASIC2.85□□□□□ -1.95
RPAP1Q9BWH6 AC097504.2-201ENST00000608088 454 ntBASIC2.85□□□□□ -1.95
RPAP1Q9BWH6 AC104763.3-201ENST00000613765 618 ntBASIC2.85□□□□□ -1.95
RPAP1Q9BWH6 AL160394.1-201ENST00000624765 724 ntBASIC2.85□□□□□ -1.95
RPAP1Q9BWH6 AC013437.2-201ENST00000639587 677 ntBASIC2.85□□□□□ -1.95
RPAP1Q9BWH6 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.95
RPAP1Q9BWH6 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.84□□□□□ -1.95
RPAP1Q9BWH6 SNORA14A-201ENST00000364773 135 ntBASIC2.84□□□□□ -1.96
RPAP1Q9BWH6 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.96
RPAP1Q9BWH6 RPS4XP3-201ENST00000398541 413 ntBASIC2.84□□□□□ -1.96
RPAP1Q9BWH6 RNU4-26P-201ENST00000410270 107 ntBASIC2.84□□□□□ -1.96
RPAP1Q9BWH6 AC068533.2-201ENST00000411872 306 ntBASIC2.84□□□□□ -1.96
RPAP1Q9BWH6 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.84□□□□□ -1.96
RPAP1Q9BWH6 MTCYBP45-201ENST00000435243 565 ntBASIC2.84□□□□□ -1.96
RPAP1Q9BWH6 AC096638.1-201ENST00000444678 216 ntBASIC2.84□□□□□ -1.96
RPAP1Q9BWH6 AL590664.1-201ENST00000448065 339 ntBASIC2.84□□□□□ -1.96
RPAP1Q9BWH6 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.84□□□□□ -1.96
RPAP1Q9BWH6 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.96
RPAP1Q9BWH6 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC2.84□□□□□ -1.96
RPAP1Q9BWH6 MTCYBP17-201ENST00000503579 789 ntBASIC2.84□□□□□ -1.96
RPAP1Q9BWH6 AC114981.1-201ENST00000503897 678 ntBASIC2.84□□□□□ -1.96
RPAP1Q9BWH6 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.84□□□□□ -1.96
RPAP1Q9BWH6 CA1-215ENST00000522389 551 ntTSL 3 BASIC2.84□□□□□ -1.96
RPAP1Q9BWH6 ATP5F1P5-201ENST00000526403 760 ntBASIC2.84□□□□□ -1.96
RPAP1Q9BWH6 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC2.84□□□□□ -1.96
RPAP1Q9BWH6 AC009163.5-201ENST00000575421 637 ntBASIC2.84□□□□□ -1.96
RPAP1Q9BWH6 AC004853.1-201ENST00000604902 698 ntBASIC2.84□□□□□ -1.96
RPAP1Q9BWH6 AC018645.2-201ENST00000609151 472 ntBASIC2.84□□□□□ -1.96
RPAP1Q9BWH6 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.84□□□□□ -1.96
RPAP1Q9BWH6 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.84□□□□□ -1.96
RPAP1Q9BWH6 SNORA1.3-201ENST00000384676 136 ntBASIC2.83□□□□□ -1.96
RPAP1Q9BWH6 RNU2-43P-201ENST00000410306 190 ntBASIC2.83□□□□□ -1.96
RPAP1Q9BWH6 AC007064.1-201ENST00000412238 351 ntBASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms