Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 AL445529.1-201ENST00000398713 389 ntBASIC2.38□□□□□ -2.03
COL21A1Q96P44 AL139039.1-201ENST00000401900 692 ntBASIC2.38□□□□□ -2.03
COL21A1Q96P44 AL356320.2-201ENST00000417263 507 ntBASIC2.38□□□□□ -2.03
COL21A1Q96P44 PPP1R11P2-201ENST00000423543 382 ntBASIC2.38□□□□□ -2.03
COL21A1Q96P44 AC092573.2-201ENST00000434546 243 ntBASIC2.38□□□□□ -2.03
COL21A1Q96P44 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.38□□□□□ -2.03
COL21A1Q96P44 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.38□□□□□ -2.03
COL21A1Q96P44 RNF2P1-201ENST00000442955 1010 ntBASIC2.38□□□□□ -2.03
COL21A1Q96P44 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.38□□□□□ -2.03
COL21A1Q96P44 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.38□□□□□ -2.03
COL21A1Q96P44 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.38□□□□□ -2.03
COL21A1Q96P44 AC097493.1-201ENST00000463958 372 ntBASIC2.38□□□□□ -2.03
COL21A1Q96P44 AP000852.1-201ENST00000472460 573 ntBASIC2.38□□□□□ -2.03
COL21A1Q96P44 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC2.38□□□□□ -2.03
COL21A1Q96P44 AC009901.1-201ENST00000506703 541 ntBASIC2.38□□□□□ -2.03
COL21A1Q96P44 XKRY-201ENST00000510392 1100 ntBASIC2.38□□□□□ -2.03
COL21A1Q96P44 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.38□□□□□ -2.03
COL21A1Q96P44 AC118942.1-201ENST00000529674 1035 ntBASIC2.38□□□□□ -2.03
COL21A1Q96P44 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.38□□□□□ -2.03
COL21A1Q96P44 AC128657.1-201ENST00000549459 145 ntBASIC2.38□□□□□ -2.03
COL21A1Q96P44 AC012321.1-201ENST00000561622 1588 ntBASIC2.38□□□□□ -2.03
COL21A1Q96P44 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.38□□□□□ -2.03
COL21A1Q96P44 AL353997.4-201ENST00000586196 166 ntBASIC2.38□□□□□ -2.03
COL21A1Q96P44 BNIP3P26-201ENST00000600827 554 ntBASIC2.38□□□□□ -2.03
COL21A1Q96P44 AL590099.1-201ENST00000615276 138 ntBASIC2.38□□□□□ -2.03
COL21A1Q96P44 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.38□□□□□ -2.03
COL21A1Q96P44 AC002064.3-201ENST00000623448 346 ntBASIC2.38□□□□□ -2.03
COL21A1Q96P44 OR5H6-203ENST00000642105 978 ntBASIC2.38□□□□□ -2.03
COL21A1Q96P44 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.38□□□□□ -2.03
COL21A1Q96P44 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
COL21A1Q96P44 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.37□□□□□ -2.03
COL21A1Q96P44 AL049641.1-201ENST00000441055 1948 ntBASIC2.37□□□□□ -2.03
COL21A1Q96P44 AL161781.1-201ENST00000354277 403 ntBASIC2.37□□□□□ -2.03
COL21A1Q96P44 RNU6-560P-201ENST00000364007 108 ntBASIC2.37□□□□□ -2.03
COL21A1Q96P44 U8.8-201ENST00000365399 135 ntBASIC2.37□□□□□ -2.03
COL21A1Q96P44 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.37□□□□□ -2.03
COL21A1Q96P44 RNU6-1035P-201ENST00000384477 107 ntBASIC2.37□□□□□ -2.03
COL21A1Q96P44 RNU6-1000P-201ENST00000391066 106 ntBASIC2.37□□□□□ -2.03
COL21A1Q96P44 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
COL21A1Q96P44 AC068533.2-201ENST00000411872 306 ntBASIC2.37□□□□□ -2.03
COL21A1Q96P44 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.37□□□□□ -2.03
COL21A1Q96P44 AC080125.1-201ENST00000414888 684 ntBASIC2.37□□□□□ -2.03
COL21A1Q96P44 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.37□□□□□ -2.03
COL21A1Q96P44 SUMO1P4-201ENST00000429430 302 ntBASIC2.37□□□□□ -2.03
COL21A1Q96P44 AL358794.1-201ENST00000445689 381 ntBASIC2.37□□□□□ -2.03
COL21A1Q96P44 AC108938.1-201ENST00000451204 136 ntBASIC2.37□□□□□ -2.03
COL21A1Q96P44 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
COL21A1Q96P44 AC073901.1-201ENST00000462471 408 ntBASIC2.37□□□□□ -2.03
COL21A1Q96P44 SEM1P1-201ENST00000506694 209 ntBASIC2.37□□□□□ -2.03
COL21A1Q96P44 AC093752.1-206ENST00000511823 336 ntBASIC2.37□□□□□ -2.03
COL21A1Q96P44 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC2.37□□□□□ -2.03
COL21A1Q96P44 SNORA31.22-201ENST00000517204 135 ntBASIC2.37□□□□□ -2.03
COL21A1Q96P44 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC2.37□□□□□ -2.03
COL21A1Q96P44 AC087373.1-201ENST00000524920 491 ntBASIC2.37□□□□□ -2.03
COL21A1Q96P44 AC243972.3-201ENST00000539655 198 ntBASIC2.37□□□□□ -2.03
COL21A1Q96P44 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.37□□□□□ -2.03
COL21A1Q96P44 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC2.37□□□□□ -2.03
COL21A1Q96P44 AL132657.2-201ENST00000564417 358 ntBASIC2.37□□□□□ -2.03
COL21A1Q96P44 AC090079.2-201ENST00000575289 768 ntBASIC2.37□□□□□ -2.03
COL21A1Q96P44 MIR4435-1-201ENST00000582552 80 ntBASIC2.37□□□□□ -2.03
COL21A1Q96P44 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.37□□□□□ -2.03
COL21A1Q96P44 AL158211.4-201ENST00000606988 584 ntBASIC2.37□□□□□ -2.03
COL21A1Q96P44 AL136370.1-201ENST00000608166 691 ntBASIC2.37□□□□□ -2.03
COL21A1Q96P44 AL137847.3-201ENST00000611521 109 ntBASIC2.37□□□□□ -2.03
COL21A1Q96P44 AC013476.2-201ENST00000614456 459 ntBASIC2.37□□□□□ -2.03
COL21A1Q96P44 AC090132.2-201ENST00000615881 347 ntBASIC2.37□□□□□ -2.03
COL21A1Q96P44 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.37□□□□□ -2.03
COL21A1Q96P44 AC103798.2-201ENST00000624292 632 ntBASIC2.37□□□□□ -2.03
COL21A1Q96P44 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.37□□□□□ -2.03
COL21A1Q96P44 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
COL21A1Q96P44 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.37□□□□□ -2.03
COL21A1Q96P44 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
COL21A1Q96P44 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
COL21A1Q96P44 DDX43P2-201ENST00000604753 1354 ntBASIC2.36□□□□□ -2.03
COL21A1Q96P44 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
COL21A1Q96P44 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
COL21A1Q96P44 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
COL21A1Q96P44 AL672167.1-206ENST00000356293 943 ntBASIC2.36□□□□□ -2.03
COL21A1Q96P44 Y_RNA.234-201ENST00000364409 97 ntBASIC2.36□□□□□ -2.03
COL21A1Q96P44 MIR514A1-201ENST00000385133 98 ntBASIC2.36□□□□□ -2.03
COL21A1Q96P44 FO393413.1-201ENST00000402892 195 ntBASIC2.36□□□□□ -2.03
COL21A1Q96P44 Z85995.1-201ENST00000415547 335 ntBASIC2.36□□□□□ -2.03
COL21A1Q96P44 AC018630.2-202ENST00000422992 927 ntBASIC2.36□□□□□ -2.03
COL21A1Q96P44 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.36□□□□□ -2.03
COL21A1Q96P44 AL121890.1-201ENST00000435457 205 ntBASIC2.36□□□□□ -2.03
COL21A1Q96P44 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
COL21A1Q96P44 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.36□□□□□ -2.03
COL21A1Q96P44 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.36□□□□□ -2.03
COL21A1Q96P44 RNU7-23P-201ENST00000459465 62 ntBASIC2.36□□□□□ -2.03
COL21A1Q96P44 AC104563.1-201ENST00000476147 376 ntBASIC2.36□□□□□ -2.03
COL21A1Q96P44 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC2.36□□□□□ -2.03
COL21A1Q96P44 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.36□□□□□ -2.03
COL21A1Q96P44 HMGN1P28-201ENST00000521340 364 ntBASIC2.36□□□□□ -2.03
COL21A1Q96P44 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.36□□□□□ -2.03
COL21A1Q96P44 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.36□□□□□ -2.03
COL21A1Q96P44 TMF1P1-201ENST00000576058 373 ntBASIC2.36□□□□□ -2.03
COL21A1Q96P44 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.36□□□□□ -2.03
COL21A1Q96P44 VN1R83P-201ENST00000595685 445 ntBASIC2.36□□□□□ -2.03
COL21A1Q96P44 AC068313.1-201ENST00000604028 1008 ntBASIC2.36□□□□□ -2.03
COL21A1Q96P44 AC004067.1-201ENST00000608733 700 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms