Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 SNORA66-201ENST00000384792 133 ntBASIC5.88□□□□□ -1.47
TRIM47Q96LD4 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC5.88□□□□□ -1.47
TRIM47Q96LD4 AC092423.1-201ENST00000430165 186 ntBASIC5.88□□□□□ -1.47
TRIM47Q96LD4 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC5.88□□□□□ -1.47
TRIM47Q96LD4 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC5.88□□□□□ -1.47
TRIM47Q96LD4 RPL23AP15-201ENST00000450202 459 ntBASIC5.88□□□□□ -1.47
TRIM47Q96LD4 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC5.88□□□□□ -1.47
TRIM47Q96LD4 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC5.88□□□□□ -1.47
TRIM47Q96LD4 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC5.88□□□□□ -1.47
TRIM47Q96LD4 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.88□□□□□ -1.47
TRIM47Q96LD4 AC093840.1-201ENST00000511599 336 ntBASIC5.88□□□□□ -1.47
TRIM47Q96LD4 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC5.88□□□□□ -1.47
TRIM47Q96LD4 SNORA70.11-201ENST00000515987 138 ntBASIC5.88□□□□□ -1.47
TRIM47Q96LD4 SNORA70.13-201ENST00000516116 138 ntBASIC5.88□□□□□ -1.47
TRIM47Q96LD4 RNU6-1219P-201ENST00000516143 112 ntBASIC5.88□□□□□ -1.47
TRIM47Q96LD4 AC027369.5-201ENST00000533838 755 ntBASIC5.88□□□□□ -1.47
TRIM47Q96LD4 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.88□□□□□ -1.47
TRIM47Q96LD4 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.88□□□□□ -1.47
TRIM47Q96LD4 AC008521.1-201ENST00000587471 187 ntBASIC5.88□□□□□ -1.47
TRIM47Q96LD4 AC008814.1-201ENST00000603797 406 ntBASIC5.88□□□□□ -1.47
TRIM47Q96LD4 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC5.88□□□□□ -1.47
TRIM47Q96LD4 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
TRIM47Q96LD4 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
TRIM47Q96LD4 GABPAP-201ENST00000419271 1356 ntBASIC5.88□□□□□ -1.47
TRIM47Q96LD4 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
TRIM47Q96LD4 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
TRIM47Q96LD4 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
TRIM47Q96LD4 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
TRIM47Q96LD4 AC092376.2-201ENST00000622621 4116 ntBASIC5.88□□□□□ -1.47
TRIM47Q96LD4 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
TRIM47Q96LD4 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
TRIM47Q96LD4 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
TRIM47Q96LD4 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
TRIM47Q96LD4 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
TRIM47Q96LD4 Y_RNA.44-201ENST00000362676 108 ntBASIC5.87□□□□□ -1.47
TRIM47Q96LD4 Y_RNA.272-201ENST00000364696 102 ntBASIC5.87□□□□□ -1.47
TRIM47Q96LD4 Y_RNA.439-201ENST00000384119 94 ntBASIC5.87□□□□□ -1.47
TRIM47Q96LD4 Y_RNA.441-201ENST00000384123 112 ntBASIC5.87□□□□□ -1.47
TRIM47Q96LD4 RNU6-921P-201ENST00000384361 107 ntBASIC5.87□□□□□ -1.47
TRIM47Q96LD4 RNU6-729P-201ENST00000384399 107 ntBASIC5.87□□□□□ -1.47
TRIM47Q96LD4 Y_RNA.580-201ENST00000391004 95 ntBASIC5.87□□□□□ -1.47
TRIM47Q96LD4 RN7SKP100-201ENST00000411258 284 ntBASIC5.87□□□□□ -1.47
TRIM47Q96LD4 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC5.87□□□□□ -1.47
TRIM47Q96LD4 AC008280.1-201ENST00000418851 412 ntBASIC5.87□□□□□ -1.47
TRIM47Q96LD4 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.87□□□□□ -1.47
TRIM47Q96LD4 AC007389.2-201ENST00000434630 306 ntBASIC5.87□□□□□ -1.47
TRIM47Q96LD4 RPL35AP22-201ENST00000436855 335 ntBASIC5.87□□□□□ -1.47
TRIM47Q96LD4 RBMY2TP-201ENST00000451162 947 ntBASIC5.87□□□□□ -1.47
TRIM47Q96LD4 RN7SL319P-201ENST00000480656 221 ntBASIC5.87□□□□□ -1.47
TRIM47Q96LD4 RN7SL817P-201ENST00000480777 288 ntBASIC5.87□□□□□ -1.47
TRIM47Q96LD4 CYCTP-201ENST00000504253 315 ntBASIC5.87□□□□□ -1.47
TRIM47Q96LD4 NDUFB4P9-201ENST00000511646 388 ntBASIC5.87□□□□□ -1.47
TRIM47Q96LD4 RNU4-57P-201ENST00000515980 135 ntBASIC5.87□□□□□ -1.47
TRIM47Q96LD4 RNA5SP230-201ENST00000517039 122 ntBASIC5.87□□□□□ -1.47
TRIM47Q96LD4 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC5.87□□□□□ -1.47
TRIM47Q96LD4 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.87□□□□□ -1.47
TRIM47Q96LD4 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC5.87□□□□□ -1.47
TRIM47Q96LD4 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.87□□□□□ -1.47
TRIM47Q96LD4 MIR4273-201ENST00000582824 84 ntBASIC5.87□□□□□ -1.47
TRIM47Q96LD4 MIR4660-201ENST00000583549 74 ntBASIC5.87□□□□□ -1.47
TRIM47Q96LD4 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC5.87□□□□□ -1.47
TRIM47Q96LD4 ELOCP5-201ENST00000604924 333 ntBASIC5.87□□□□□ -1.47
TRIM47Q96LD4 AL590392.1-201ENST00000604960 446 ntBASIC5.87□□□□□ -1.47
TRIM47Q96LD4 AL136313.1-201ENST00000624804 202 ntBASIC5.87□□□□□ -1.47
TRIM47Q96LD4 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
TRIM47Q96LD4 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
TRIM47Q96LD4 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
TRIM47Q96LD4 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
TRIM47Q96LD4 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
TRIM47Q96LD4 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
TRIM47Q96LD4 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.86□□□□□ -1.47
TRIM47Q96LD4 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.86□□□□□ -1.47
TRIM47Q96LD4 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
TRIM47Q96LD4 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
TRIM47Q96LD4 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.86□□□□□ -1.47
TRIM47Q96LD4 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
TRIM47Q96LD4 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
TRIM47Q96LD4 MIR298-201ENST00000401212 88 ntBASIC5.86□□□□□ -1.47
TRIM47Q96LD4 MTCYBP2-201ENST00000407745 171 ntBASIC5.86□□□□□ -1.47
TRIM47Q96LD4 Y_RNA.602-201ENST00000410535 92 ntBASIC5.86□□□□□ -1.47
TRIM47Q96LD4 AL133384.1-201ENST00000412744 351 ntBASIC5.86□□□□□ -1.47
TRIM47Q96LD4 FTLP19-201ENST00000433300 394 ntBASIC5.86□□□□□ -1.47
TRIM47Q96LD4 NOP56P2-201ENST00000447491 769 ntBASIC5.86□□□□□ -1.47
TRIM47Q96LD4 AC005229.2-201ENST00000456995 399 ntBASIC5.86□□□□□ -1.47
TRIM47Q96LD4 AP001324.2-201ENST00000461163 319 ntBASIC5.86□□□□□ -1.47
TRIM47Q96LD4 RN7SL814P-201ENST00000487715 300 ntBASIC5.86□□□□□ -1.47
TRIM47Q96LD4 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC5.86□□□□□ -1.47
TRIM47Q96LD4 IGKV2-36-201ENST00000519999 223 ntBASIC5.86□□□□□ -1.47
TRIM47Q96LD4 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.86□□□□□ -1.47
TRIM47Q96LD4 BNIP3P5-201ENST00000562290 498 ntBASIC5.86□□□□□ -1.47
TRIM47Q96LD4 AC012443.1-201ENST00000605605 231 ntBASIC5.86□□□□□ -1.47
TRIM47Q96LD4 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC5.86□□□□□ -1.47
TRIM47Q96LD4 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
TRIM47Q96LD4 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
TRIM47Q96LD4 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.86□□□□□ -1.47
TRIM47Q96LD4 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.86□□□□□ -1.47
TRIM47Q96LD4 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.86□□□□□ -1.47
TRIM47Q96LD4 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
TRIM47Q96LD4 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
TRIM47Q96LD4 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 122.2 ms