Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.46□□□□□ -2.02
ECHDC3Q96DC8 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
ECHDC3Q96DC8 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
ECHDC3Q96DC8 MIR514A1-201ENST00000385133 98 ntBASIC2.46□□□□□ -2.02
ECHDC3Q96DC8 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
ECHDC3Q96DC8 RNU6-298P-201ENST00000390888 96 ntBASIC2.46□□□□□ -2.02
ECHDC3Q96DC8 Y_RNA.578-201ENST00000390903 88 ntBASIC2.46□□□□□ -2.02
ECHDC3Q96DC8 AC069282.1-201ENST00000411911 526 ntBASIC2.46□□□□□ -2.02
ECHDC3Q96DC8 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.46□□□□□ -2.02
ECHDC3Q96DC8 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.46□□□□□ -2.02
ECHDC3Q96DC8 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC2.46□□□□□ -2.02
ECHDC3Q96DC8 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC2.46□□□□□ -2.02
ECHDC3Q96DC8 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC2.46□□□□□ -2.02
ECHDC3Q96DC8 ARPC3P5-201ENST00000448802 534 ntBASIC2.46□□□□□ -2.02
ECHDC3Q96DC8 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.46□□□□□ -2.02
ECHDC3Q96DC8 AC027673.1-201ENST00000456245 405 ntBASIC2.46□□□□□ -2.02
ECHDC3Q96DC8 AC073901.1-201ENST00000462471 408 ntBASIC2.46□□□□□ -2.02
ECHDC3Q96DC8 RPL31P41-201ENST00000477967 372 ntBASIC2.46□□□□□ -2.02
ECHDC3Q96DC8 AC069528.1-202ENST00000482888 637 ntBASIC2.46□□□□□ -2.02
ECHDC3Q96DC8 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.46□□□□□ -2.02
ECHDC3Q96DC8 SUMO2P5-201ENST00000506790 245 ntBASIC2.46□□□□□ -2.02
ECHDC3Q96DC8 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.46□□□□□ -2.02
ECHDC3Q96DC8 TTC39CP1-201ENST00000512513 755 ntBASIC2.46□□□□□ -2.02
ECHDC3Q96DC8 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.46□□□□□ -2.02
ECHDC3Q96DC8 HMGB1P41-201ENST00000520234 440 ntBASIC2.46□□□□□ -2.02
ECHDC3Q96DC8 OR5BN1P-201ENST00000532955 829 ntBASIC2.46□□□□□ -2.02
ECHDC3Q96DC8 AC004486.1-201ENST00000546846 233 ntBASIC2.46□□□□□ -2.02
ECHDC3Q96DC8 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
ECHDC3Q96DC8 AL512310.1-201ENST00000548639 172 ntBASIC2.46□□□□□ -2.02
ECHDC3Q96DC8 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC2.46□□□□□ -2.02
ECHDC3Q96DC8 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC2.46□□□□□ -2.02
ECHDC3Q96DC8 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC2.46□□□□□ -2.02
ECHDC3Q96DC8 MIR4513-201ENST00000581077 86 ntBASIC2.46□□□□□ -2.02
ECHDC3Q96DC8 MIR3670-2-201ENST00000582974 65 ntBASIC2.46□□□□□ -2.02
ECHDC3Q96DC8 MIR3670-1-201ENST00000584160 65 ntBASIC2.46□□□□□ -2.02
ECHDC3Q96DC8 MIR3670-3-201ENST00000584855 65 ntBASIC2.46□□□□□ -2.02
ECHDC3Q96DC8 AP000787.2-201ENST00000604432 568 ntBASIC2.46□□□□□ -2.02
ECHDC3Q96DC8 AC024560.3-201ENST00000608482 349 ntBASIC2.46□□□□□ -2.02
ECHDC3Q96DC8 MIR3670-4-201ENST00000612260 65 ntBASIC2.46□□□□□ -2.02
ECHDC3Q96DC8 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.46□□□□□ -2.02
ECHDC3Q96DC8 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.46□□□□□ -2.02
ECHDC3Q96DC8 AL158163.2-201ENST00000619110 700 ntBASIC2.46□□□□□ -2.02
ECHDC3Q96DC8 AC123767.1-202ENST00000620407 817 ntBASIC2.46□□□□□ -2.02
ECHDC3Q96DC8 AC073308.1-201ENST00000623696 305 ntBASIC2.46□□□□□ -2.02
ECHDC3Q96DC8 AC010297.1-201ENST00000623948 149 ntBASIC2.46□□□□□ -2.02
ECHDC3Q96DC8 OR1S1-201ENST00000624470 978 ntBASIC2.46□□□□□ -2.02
ECHDC3Q96DC8 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
ECHDC3Q96DC8 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.46□□□□□ -2.02
ECHDC3Q96DC8 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.45□□□□□ -2.02
ECHDC3Q96DC8 RNU6-28P-201ENST00000362378 107 ntBASIC2.45□□□□□ -2.02
ECHDC3Q96DC8 RNU5A-1-201ENST00000362698 116 ntBASIC2.45□□□□□ -2.02
ECHDC3Q96DC8 RNU6-224P-201ENST00000384055 107 ntBASIC2.45□□□□□ -2.02
ECHDC3Q96DC8 RNU6-1035P-201ENST00000384477 107 ntBASIC2.45□□□□□ -2.02
ECHDC3Q96DC8 Z75741.2-201ENST00000417272 1167 ntBASIC2.45□□□□□ -2.02
ECHDC3Q96DC8 AC018630.2-202ENST00000422992 927 ntBASIC2.45□□□□□ -2.02
ECHDC3Q96DC8 MTCO2P17-201ENST00000424336 677 ntBASIC2.45□□□□□ -2.02
ECHDC3Q96DC8 AL356867.1-201ENST00000429623 299 ntBASIC2.45□□□□□ -2.02
ECHDC3Q96DC8 GTF2IP3-201ENST00000433887 494 ntBASIC2.45□□□□□ -2.02
ECHDC3Q96DC8 MTND4P6-201ENST00000438297 472 ntBASIC2.45□□□□□ -2.02
ECHDC3Q96DC8 AP000705.1-201ENST00000454567 350 ntBASIC2.45□□□□□ -2.02
ECHDC3Q96DC8 AL109741.2-201ENST00000455561 343 ntBASIC2.45□□□□□ -2.02
ECHDC3Q96DC8 RNU7-136P-201ENST00000458819 69 ntBASIC2.45□□□□□ -2.02
ECHDC3Q96DC8 AC128713.1-201ENST00000471495 306 ntBASIC2.45□□□□□ -2.02
ECHDC3Q96DC8 KC877373.1-201ENST00000479066 408 ntBASIC2.45□□□□□ -2.02
ECHDC3Q96DC8 AC104629.1-201ENST00000494226 508 ntBASIC2.45□□□□□ -2.02
ECHDC3Q96DC8 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC2.45□□□□□ -2.02
ECHDC3Q96DC8 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.45□□□□□ -2.02
ECHDC3Q96DC8 MIR4446-201ENST00000578505 67 ntBASIC2.45□□□□□ -2.02
ECHDC3Q96DC8 AC090616.3-201ENST00000582184 217 ntBASIC2.45□□□□□ -2.02
ECHDC3Q96DC8 AC112220.2-201ENST00000605513 533 ntBASIC2.45□□□□□ -2.02
ECHDC3Q96DC8 AC103810.6-201ENST00000606708 136 ntBASIC2.45□□□□□ -2.02
ECHDC3Q96DC8 AC004067.1-201ENST00000608733 700 ntBASIC2.45□□□□□ -2.02
ECHDC3Q96DC8 DUXAP10-204ENST00000612052 616 ntBASIC2.45□□□□□ -2.02
ECHDC3Q96DC8 RNU6-1192P-201ENST00000612197 107 ntBASIC2.45□□□□□ -2.02
ECHDC3Q96DC8 AL590099.1-201ENST00000615276 138 ntBASIC2.45□□□□□ -2.02
ECHDC3Q96DC8 RNU6-489P-201ENST00000618289 107 ntBASIC2.45□□□□□ -2.02
ECHDC3Q96DC8 AP003476.1-201ENST00000623984 516 ntBASIC2.45□□□□□ -2.02
ECHDC3Q96DC8 MIR1291-201ENST00000627649 87 ntBASIC2.45□□□□□ -2.02
ECHDC3Q96DC8 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.45□□□□□ -2.02
ECHDC3Q96DC8 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
ECHDC3Q96DC8 OR5H6-203ENST00000642105 978 ntBASIC2.45□□□□□ -2.02
ECHDC3Q96DC8 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.45□□□□□ -2.02
ECHDC3Q96DC8 AC080100.1-201ENST00000624239 5356 ntBASIC2.45□□□□□ -2.02
ECHDC3Q96DC8 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.45□□□□□ -2.02
ECHDC3Q96DC8 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.44□□□□□ -2.02
ECHDC3Q96DC8 AL022578.1-201ENST00000439330 1433 ntBASIC2.44□□□□□ -2.02
ECHDC3Q96DC8 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
ECHDC3Q96DC8 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
ECHDC3Q96DC8 Y_RNA.234-201ENST00000364409 97 ntBASIC2.44□□□□□ -2.02
ECHDC3Q96DC8 RNU6-359P-201ENST00000365466 108 ntBASIC2.44□□□□□ -2.02
ECHDC3Q96DC8 RNU6-952P-201ENST00000391164 108 ntBASIC2.44□□□□□ -2.02
ECHDC3Q96DC8 AL162578.1-201ENST00000406202 378 ntBASIC2.44□□□□□ -2.02
ECHDC3Q96DC8 Z85995.1-201ENST00000415547 335 ntBASIC2.44□□□□□ -2.02
ECHDC3Q96DC8 SPA17P1-201ENST00000416656 452 ntBASIC2.44□□□□□ -2.02
ECHDC3Q96DC8 AL139421.1-201ENST00000423010 169 ntBASIC2.44□□□□□ -2.02
ECHDC3Q96DC8 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.44□□□□□ -2.02
ECHDC3Q96DC8 RPS12P2-201ENST00000439728 269 ntBASIC2.44□□□□□ -2.02
ECHDC3Q96DC8 AC104389.3-201ENST00000445629 235 ntBASIC2.44□□□□□ -2.02
ECHDC3Q96DC8 CDC42P4-201ENST00000510507 563 ntBASIC2.44□□□□□ -2.02
ECHDC3Q96DC8 TBCAP3-201ENST00000512475 312 ntBASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms