Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
APH1AQ96BI3 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.3□□□□□ -2.04
APH1AQ96BI3 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
APH1AQ96BI3 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.29□□□□□ -2.04
APH1AQ96BI3 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
APH1AQ96BI3 AL136360.1-201ENST00000503377 1900 ntBASIC2.29□□□□□ -2.04
APH1AQ96BI3 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
APH1AQ96BI3 FTLP6-201ENST00000355274 422 ntBASIC2.29□□□□□ -2.04
APH1AQ96BI3 RNU1-100P-201ENST00000365255 165 ntBASIC2.29□□□□□ -2.04
APH1AQ96BI3 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.29□□□□□ -2.04
APH1AQ96BI3 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.29□□□□□ -2.04
APH1AQ96BI3 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.29□□□□□ -2.04
APH1AQ96BI3 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
APH1AQ96BI3 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC2.29□□□□□ -2.04
APH1AQ96BI3 RNU2-33P-201ENST00000410344 192 ntBASIC2.29□□□□□ -2.04
APH1AQ96BI3 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.29□□□□□ -2.04
APH1AQ96BI3 MTND4P3-201ENST00000417829 541 ntBASIC2.29□□□□□ -2.04
APH1AQ96BI3 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.29□□□□□ -2.04
APH1AQ96BI3 AC233279.1-201ENST00000455300 423 ntBASIC2.29□□□□□ -2.04
APH1AQ96BI3 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.29□□□□□ -2.04
APH1AQ96BI3 RPS20P20-201ENST00000460498 340 ntBASIC2.29□□□□□ -2.04
APH1AQ96BI3 RPL31P50-201ENST00000471002 296 ntBASIC2.29□□□□□ -2.04
APH1AQ96BI3 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
APH1AQ96BI3 AC092902.1-201ENST00000486999 259 ntBASIC2.29□□□□□ -2.04
APH1AQ96BI3 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC2.29□□□□□ -2.04
APH1AQ96BI3 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.29□□□□□ -2.04
APH1AQ96BI3 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.29□□□□□ -2.04
APH1AQ96BI3 AC119751.5-201ENST00000514077 770 ntBASIC2.29□□□□□ -2.04
APH1AQ96BI3 AC025881.1-201ENST00000518851 512 ntBASIC2.29□□□□□ -2.04
APH1AQ96BI3 ATP5F1P5-201ENST00000526403 760 ntBASIC2.29□□□□□ -2.04
APH1AQ96BI3 COX6CP5-201ENST00000527162 228 ntBASIC2.29□□□□□ -2.04
APH1AQ96BI3 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC2.29□□□□□ -2.04
APH1AQ96BI3 MIR3162-201ENST00000581818 82 ntBASIC2.29□□□□□ -2.04
APH1AQ96BI3 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC2.29□□□□□ -2.04
APH1AQ96BI3 AL353997.4-201ENST00000586196 166 ntBASIC2.29□□□□□ -2.04
APH1AQ96BI3 RPL12P50-201ENST00000603116 116 ntBASIC2.29□□□□□ -2.04
APH1AQ96BI3 AL355877.2-201ENST00000603670 358 ntBASIC2.29□□□□□ -2.04
APH1AQ96BI3 AC093673.2-201ENST00000609674 331 ntBASIC2.29□□□□□ -2.04
APH1AQ96BI3 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.29□□□□□ -2.04
APH1AQ96BI3 AL512427.1-201ENST00000618593 349 ntBASIC2.29□□□□□ -2.04
APH1AQ96BI3 MTND1P37-201ENST00000636562 264 ntBASIC2.29□□□□□ -2.04
APH1AQ96BI3 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
APH1AQ96BI3 Y_RNA.408-201ENST00000383987 102 ntBASIC2.28□□□□□ -2.04
APH1AQ96BI3 Y_RNA.578-201ENST00000390903 88 ntBASIC2.28□□□□□ -2.04
APH1AQ96BI3 RNA5SP210-201ENST00000391034 120 ntBASIC2.28□□□□□ -2.04
APH1AQ96BI3 RNU6-952P-201ENST00000391164 108 ntBASIC2.28□□□□□ -2.04
APH1AQ96BI3 USP9YP20-201ENST00000419224 558 ntBASIC2.28□□□□□ -2.04
APH1AQ96BI3 ZNF863P-201ENST00000426746 417 ntBASIC2.28□□□□□ -2.04
APH1AQ96BI3 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
APH1AQ96BI3 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.28□□□□□ -2.04
APH1AQ96BI3 MTND1P9-201ENST00000453775 944 ntBASIC2.28□□□□□ -2.04
APH1AQ96BI3 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.28□□□□□ -2.04
APH1AQ96BI3 ATG12P2-201ENST00000456830 416 ntBASIC2.28□□□□□ -2.04
APH1AQ96BI3 AC069528.1-202ENST00000482888 637 ntBASIC2.28□□□□□ -2.04
APH1AQ96BI3 RN7SL297P-201ENST00000483161 293 ntBASIC2.28□□□□□ -2.04
APH1AQ96BI3 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.28□□□□□ -2.04
APH1AQ96BI3 AC008427.1-201ENST00000503102 655 ntBASIC2.28□□□□□ -2.04
APH1AQ96BI3 XKRY-201ENST00000510392 1100 ntBASIC2.28□□□□□ -2.04
APH1AQ96BI3 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.28□□□□□ -2.04
APH1AQ96BI3 NRON-201ENST00000517270 370 ntBASIC2.28□□□□□ -2.04
APH1AQ96BI3 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.28□□□□□ -2.04
APH1AQ96BI3 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.28□□□□□ -2.04
APH1AQ96BI3 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.28□□□□□ -2.04
APH1AQ96BI3 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.28□□□□□ -2.04
APH1AQ96BI3 AC005951.2-201ENST00000576282 495 ntBASIC2.28□□□□□ -2.04
APH1AQ96BI3 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.28□□□□□ -2.04
APH1AQ96BI3 MIR3117-201ENST00000584034 78 ntBASIC2.28□□□□□ -2.04
APH1AQ96BI3 MIR3616-201ENST00000584070 92 ntBASIC2.28□□□□□ -2.04
APH1AQ96BI3 HMGN2P15-201ENST00000585707 270 ntBASIC2.28□□□□□ -2.04
APH1AQ96BI3 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
APH1AQ96BI3 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.27□□□□□ -2.05
APH1AQ96BI3 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.27□□□□□ -2.05
APH1AQ96BI3 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.27□□□□□ -2.05
APH1AQ96BI3 DDX10P1-201ENST00000448545 1933 ntBASIC2.27□□□□□ -2.05
APH1AQ96BI3 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
APH1AQ96BI3 RNU6-1078P-201ENST00000364522 103 ntBASIC2.27□□□□□ -2.05
APH1AQ96BI3 RNU6-637P-201ENST00000384050 107 ntBASIC2.27□□□□□ -2.05
APH1AQ96BI3 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.27□□□□□ -2.05
APH1AQ96BI3 PTP4A1P7-201ENST00000423476 514 ntBASIC2.27□□□□□ -2.05
APH1AQ96BI3 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC2.27□□□□□ -2.05
APH1AQ96BI3 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.27□□□□□ -2.05
APH1AQ96BI3 DPPA3P1-201ENST00000448050 469 ntBASIC2.27□□□□□ -2.05
APH1AQ96BI3 BX322784.1-201ENST00000455793 1077 ntBASIC2.27□□□□□ -2.05
APH1AQ96BI3 AC097493.1-201ENST00000463958 372 ntBASIC2.27□□□□□ -2.05
APH1AQ96BI3 MRPS17P3-201ENST00000465453 385 ntBASIC2.27□□□□□ -2.05
APH1AQ96BI3 SRIP1-201ENST00000489235 288 ntBASIC2.27□□□□□ -2.05
APH1AQ96BI3 EIF4EP3-201ENST00000498782 656 ntBASIC2.27□□□□□ -2.05
APH1AQ96BI3 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.27□□□□□ -2.05
APH1AQ96BI3 AC112198.4-201ENST00000515450 351 ntBASIC2.27□□□□□ -2.05
APH1AQ96BI3 RNA5SP291-201ENST00000517222 105 ntBASIC2.27□□□□□ -2.05
APH1AQ96BI3 AP003497.1-201ENST00000528472 562 ntBASIC2.27□□□□□ -2.05
APH1AQ96BI3 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC2.27□□□□□ -2.05
APH1AQ96BI3 AC243972.3-201ENST00000539655 198 ntBASIC2.27□□□□□ -2.05
APH1AQ96BI3 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
APH1AQ96BI3 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.27□□□□□ -2.05
APH1AQ96BI3 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC2.27□□□□□ -2.05
APH1AQ96BI3 MIR4446-201ENST00000578505 67 ntBASIC2.27□□□□□ -2.05
APH1AQ96BI3 MIR5092-201ENST00000583139 88 ntBASIC2.27□□□□□ -2.05
APH1AQ96BI3 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.27□□□□□ -2.05
APH1AQ96BI3 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms