Protein–RNA interactions for Protein: Q969G3

SMARCE1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, humanhuman

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1Q969G3 AC010424.1-201ENST00000506336 297 ntBASIC3.57□□□□□ -1.84
SMARCE1Q969G3 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SMARCE1Q969G3 AC023632.4-201ENST00000517783 191 ntBASIC3.57□□□□□ -1.84
SMARCE1Q969G3 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.57□□□□□ -1.84
SMARCE1Q969G3 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.57□□□□□ -1.84
SMARCE1Q969G3 MIR2682-201ENST00000580305 110 ntBASIC3.57□□□□□ -1.84
SMARCE1Q969G3 AC006130.2-201ENST00000586202 326 ntBASIC3.57□□□□□ -1.84
SMARCE1Q969G3 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC3.57□□□□□ -1.84
SMARCE1Q969G3 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.57□□□□□ -1.84
SMARCE1Q969G3 BNIP3P8-201ENST00000597863 560 ntBASIC3.57□□□□□ -1.84
SMARCE1Q969G3 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.57□□□□□ -1.84
SMARCE1Q969G3 uc_338.25-201ENST00000613756 156 ntBASIC3.57□□□□□ -1.84
SMARCE1Q969G3 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
SMARCE1Q969G3 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
SMARCE1Q969G3 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.57□□□□□ -1.84
SMARCE1Q969G3 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.57□□□□□ -1.84
SMARCE1Q969G3 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SMARCE1Q969G3 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SMARCE1Q969G3 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SMARCE1Q969G3 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.56□□□□□ -1.84
SMARCE1Q969G3 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.56□□□□□ -1.84
SMARCE1Q969G3 Y_RNA.51-201ENST00000362725 102 ntBASIC3.56□□□□□ -1.84
SMARCE1Q969G3 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SMARCE1Q969G3 RN7SKP123-201ENST00000410732 291 ntBASIC3.56□□□□□ -1.84
SMARCE1Q969G3 AC010153.1-201ENST00000432862 727 ntBASIC3.56□□□□□ -1.84
SMARCE1Q969G3 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
SMARCE1Q969G3 AL031667.1-201ENST00000440222 725 ntBASIC3.56□□□□□ -1.84
SMARCE1Q969G3 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.56□□□□□ -1.84
SMARCE1Q969G3 MTCO1P19-201ENST00000443487 500 ntBASIC3.56□□□□□ -1.84
SMARCE1Q969G3 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.56□□□□□ -1.84
SMARCE1Q969G3 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.56□□□□□ -1.84
SMARCE1Q969G3 AL049874.1-201ENST00000489560 388 ntBASIC3.56□□□□□ -1.84
SMARCE1Q969G3 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.56□□□□□ -1.84
SMARCE1Q969G3 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.56□□□□□ -1.84
SMARCE1Q969G3 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.56□□□□□ -1.84
SMARCE1Q969G3 AC022447.1-201ENST00000515358 464 ntBASIC3.56□□□□□ -1.84
SMARCE1Q969G3 RNU6-64P-201ENST00000517119 105 ntBASIC3.56□□□□□ -1.84
SMARCE1Q969G3 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.56□□□□□ -1.84
SMARCE1Q969G3 AP003467.2-201ENST00000520175 319 ntBASIC3.56□□□□□ -1.84
SMARCE1Q969G3 HMGN1P28-201ENST00000521340 364 ntBASIC3.56□□□□□ -1.84
SMARCE1Q969G3 FAM60DP-201ENST00000524174 632 ntBASIC3.56□□□□□ -1.84
SMARCE1Q969G3 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.56□□□□□ -1.84
SMARCE1Q969G3 DEFB108A-201ENST00000530110 222 ntBASIC3.56□□□□□ -1.84
SMARCE1Q969G3 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.56□□□□□ -1.84
SMARCE1Q969G3 AL163153.1-201ENST00000554223 283 ntBASIC3.56□□□□□ -1.84
SMARCE1Q969G3 RPL21P5-201ENST00000554662 472 ntBASIC3.56□□□□□ -1.84
SMARCE1Q969G3 AL391156.1-201ENST00000554965 554 ntBASIC3.56□□□□□ -1.84
SMARCE1Q969G3 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC3.56□□□□□ -1.84
SMARCE1Q969G3 MIR4506-201ENST00000584693 77 ntBASIC3.56□□□□□ -1.84
SMARCE1Q969G3 NBR2-204ENST00000587322 63 ntBASIC3.56□□□□□ -1.84
SMARCE1Q969G3 AL359999.1-201ENST00000604513 294 ntBASIC3.56□□□□□ -1.84
SMARCE1Q969G3 AC121334.2-201ENST00000605387 271 ntBASIC3.56□□□□□ -1.84
SMARCE1Q969G3 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SMARCE1Q969G3 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SMARCE1Q969G3 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
SMARCE1Q969G3 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.56□□□□□ -1.84
SMARCE1Q969G3 AC118273.1-201ENST00000525324 3006 ntBASIC3.56□□□□□ -1.84
SMARCE1Q969G3 MTND5P19-201ENST00000424872 1794 ntBASIC3.56□□□□□ -1.84
SMARCE1Q969G3 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.56□□□□□ -1.84
SMARCE1Q969G3 Y_RNA.553-201ENST00000384670 102 ntBASIC3.55□□□□□ -1.84
SMARCE1Q969G3 SNORA46-201ENST00000384762 135 ntBASIC3.55□□□□□ -1.84
SMARCE1Q969G3 MIR490-201ENST00000384865 128 ntBASIC3.55□□□□□ -1.84
SMARCE1Q969G3 MIR493-201ENST00000385254 89 ntBASIC3.55□□□□□ -1.84
SMARCE1Q969G3 SNORA40.3-201ENST00000390964 122 ntBASIC3.55□□□□□ -1.84
SMARCE1Q969G3 RPL21P24-201ENST00000413752 448 ntBASIC3.55□□□□□ -1.84
SMARCE1Q969G3 AC063979.1-201ENST00000415539 377 ntBASIC3.55□□□□□ -1.84
SMARCE1Q969G3 AC245054.2-201ENST00000415639 319 ntBASIC3.55□□□□□ -1.84
SMARCE1Q969G3 AC018630.2-202ENST00000422992 927 ntBASIC3.55□□□□□ -1.84
SMARCE1Q969G3 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.55□□□□□ -1.84
SMARCE1Q969G3 AL589872.1-201ENST00000426602 288 ntBASIC3.55□□□□□ -1.84
SMARCE1Q969G3 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.55□□□□□ -1.84
SMARCE1Q969G3 OR2AS1P-201ENST00000427827 319 ntBASIC3.55□□□□□ -1.84
SMARCE1Q969G3 AC244505.4-201ENST00000434905 287 ntBASIC3.55□□□□□ -1.84
SMARCE1Q969G3 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC3.55□□□□□ -1.84
SMARCE1Q969G3 AC005094.1-201ENST00000440420 368 ntBASIC3.55□□□□□ -1.84
SMARCE1Q969G3 MTCO3P45-201ENST00000443036 613 ntBASIC3.55□□□□□ -1.84
SMARCE1Q969G3 SSXP5-201ENST00000443473 287 ntBASIC3.55□□□□□ -1.84
SMARCE1Q969G3 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC3.55□□□□□ -1.84
SMARCE1Q969G3 ELOCP30-201ENST00000447108 299 ntBASIC3.55□□□□□ -1.84
SMARCE1Q969G3 UQCRHP3-201ENST00000451503 251 ntBASIC3.55□□□□□ -1.84
SMARCE1Q969G3 RPS27AP1-201ENST00000475545 471 ntBASIC3.55□□□□□ -1.84
SMARCE1Q969G3 RPL31P60-201ENST00000478450 367 ntBASIC3.55□□□□□ -1.84
SMARCE1Q969G3 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
SMARCE1Q969G3 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.55□□□□□ -1.84
SMARCE1Q969G3 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC3.55□□□□□ -1.84
SMARCE1Q969G3 AC123904.3-201ENST00000547218 814 ntBASIC3.55□□□□□ -1.84
SMARCE1Q969G3 RPL21P12-201ENST00000559810 515 ntBASIC3.55□□□□□ -1.84
SMARCE1Q969G3 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.55□□□□□ -1.84
SMARCE1Q969G3 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.55□□□□□ -1.84
SMARCE1Q969G3 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.55□□□□□ -1.84
SMARCE1Q969G3 MIR4293-201ENST00000584305 78 ntBASIC3.55□□□□□ -1.84
SMARCE1Q969G3 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.55□□□□□ -1.84
SMARCE1Q969G3 KC877982.1-201ENST00000602313 470 ntBASIC3.55□□□□□ -1.84
SMARCE1Q969G3 RN7SKP299-201ENST00000606679 301 ntBASIC3.55□□□□□ -1.84
SMARCE1Q969G3 AC090970.3-201ENST00000612566 866 ntBASIC3.55□□□□□ -1.84
SMARCE1Q969G3 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.55□□□□□ -1.84
SMARCE1Q969G3 MIR6798-201ENST00000612887 67 ntBASIC3.55□□□□□ -1.84
SMARCE1Q969G3 AC090582.1-201ENST00000636321 199 ntBASIC3.55□□□□□ -1.84
SMARCE1Q969G3 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.55□□□□□ -1.84
SMARCE1Q969G3 OR4G2P-202ENST00000641004 1759 ntBASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms