Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 PRO1804-201ENST00000623780 2050 ntBASIC3.87□□□□□ -1.79
ATP2A3Q93084 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
ATP2A3Q93084 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
ATP2A3Q93084 RNU6-1155P-201ENST00000363554 107 ntBASIC3.87□□□□□ -1.79
ATP2A3Q93084 RNA5SP51-201ENST00000364750 119 ntBASIC3.87□□□□□ -1.79
ATP2A3Q93084 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.87□□□□□ -1.79
ATP2A3Q93084 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
ATP2A3Q93084 Y_RNA.548-201ENST00000384656 105 ntBASIC3.87□□□□□ -1.79
ATP2A3Q93084 MIR34B-201ENST00000385076 84 ntBASIC3.87□□□□□ -1.79
ATP2A3Q93084 RNU6-780P-201ENST00000391030 104 ntBASIC3.87□□□□□ -1.79
ATP2A3Q93084 RPL23AP32-201ENST00000395315 459 ntBASIC3.87□□□□□ -1.79
ATP2A3Q93084 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.87□□□□□ -1.79
ATP2A3Q93084 GSTA9P-201ENST00000406231 611 ntBASIC3.87□□□□□ -1.79
ATP2A3Q93084 AC127391.1-201ENST00000411737 98 ntBASIC3.87□□□□□ -1.79
ATP2A3Q93084 USP9YP6-201ENST00000413550 854 ntBASIC3.87□□□□□ -1.79
ATP2A3Q93084 AC007390.1-201ENST00000415722 356 ntBASIC3.87□□□□□ -1.79
ATP2A3Q93084 AC068533.1-201ENST00000418542 415 ntBASIC3.87□□□□□ -1.79
ATP2A3Q93084 PIGFP2-201ENST00000421400 651 ntBASIC3.87□□□□□ -1.79
ATP2A3Q93084 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.87□□□□□ -1.79
ATP2A3Q93084 USP9YP18-201ENST00000425912 695 ntBASIC3.87□□□□□ -1.79
ATP2A3Q93084 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.87□□□□□ -1.79
ATP2A3Q93084 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.87□□□□□ -1.79
ATP2A3Q93084 AC119618.1-201ENST00000434191 222 ntBASIC3.87□□□□□ -1.79
ATP2A3Q93084 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
ATP2A3Q93084 USP9YP15-201ENST00000442391 422 ntBASIC3.87□□□□□ -1.79
ATP2A3Q93084 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
ATP2A3Q93084 Z99127.3-201ENST00000448158 395 ntBASIC3.87□□□□□ -1.79
ATP2A3Q93084 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
ATP2A3Q93084 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.87□□□□□ -1.79
ATP2A3Q93084 UBDP1-202ENST00000457888 382 ntBASIC3.87□□□□□ -1.79
ATP2A3Q93084 SNORD105B-201ENST00000458770 79 ntBASIC3.87□□□□□ -1.79
ATP2A3Q93084 RPS23P3-201ENST00000470993 430 ntBASIC3.87□□□□□ -1.79
ATP2A3Q93084 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC3.87□□□□□ -1.79
ATP2A3Q93084 RBM43P1-201ENST00000476891 1081 ntBASIC3.87□□□□□ -1.79
ATP2A3Q93084 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.87□□□□□ -1.79
ATP2A3Q93084 ARL2BPP6-201ENST00000512757 439 ntBASIC3.87□□□□□ -1.79
ATP2A3Q93084 AC017037.2-201ENST00000513850 890 ntBASIC3.87□□□□□ -1.79
ATP2A3Q93084 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.87□□□□□ -1.79
ATP2A3Q93084 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.87□□□□□ -1.79
ATP2A3Q93084 OR4K8P-201ENST00000578842 1048 ntBASIC3.87□□□□□ -1.79
ATP2A3Q93084 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.87□□□□□ -1.79
ATP2A3Q93084 AL133173.2-201ENST00000614270 90 ntBASIC3.87□□□□□ -1.79
ATP2A3Q93084 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
ATP2A3Q93084 AL158209.2-201ENST00000619266 216 ntBASIC3.87□□□□□ -1.79
ATP2A3Q93084 AC136475.10-201ENST00000620253 385 ntBASIC3.87□□□□□ -1.79
ATP2A3Q93084 AL732618.1-201ENST00000623251 301 ntBASIC3.87□□□□□ -1.79
ATP2A3Q93084 AC068880.5-201ENST00000624331 290 ntBASIC3.87□□□□□ -1.79
ATP2A3Q93084 AL008636.1-201ENST00000625038 1018 ntBASIC3.87□□□□□ -1.79
ATP2A3Q93084 AL159972.1-201ENST00000625150 448 ntBASIC3.87□□□□□ -1.79
ATP2A3Q93084 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.87□□□□□ -1.79
ATP2A3Q93084 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
ATP2A3Q93084 TNPO1P3-201ENST00000436471 2662 ntBASIC3.87□□□□□ -1.79
ATP2A3Q93084 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
ATP2A3Q93084 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
ATP2A3Q93084 MTCO1P9-201ENST00000505577 1534 ntBASIC3.86□□□□□ -1.79
ATP2A3Q93084 RNU6-525P-201ENST00000363685 104 ntBASIC3.86□□□□□ -1.79
ATP2A3Q93084 RNU6-173P-201ENST00000364215 104 ntBASIC3.86□□□□□ -1.79
ATP2A3Q93084 RNU6-1078P-201ENST00000364522 103 ntBASIC3.86□□□□□ -1.79
ATP2A3Q93084 MIR218-2-201ENST00000385006 110 ntBASIC3.86□□□□□ -1.79
ATP2A3Q93084 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
ATP2A3Q93084 HMGN1P24-201ENST00000412282 298 ntBASIC3.86□□□□□ -1.79
ATP2A3Q93084 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC3.86□□□□□ -1.79
ATP2A3Q93084 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC3.86□□□□□ -1.79
ATP2A3Q93084 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.86□□□□□ -1.79
ATP2A3Q93084 AL358934.1-201ENST00000432346 324 ntBASIC3.86□□□□□ -1.79
ATP2A3Q93084 WASF1P1-201ENST00000447560 1131 ntBASIC3.86□□□□□ -1.79
ATP2A3Q93084 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.86□□□□□ -1.79
ATP2A3Q93084 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.86□□□□□ -1.79
ATP2A3Q93084 TRBV12-2-201ENST00000489763 344 ntBASIC3.86□□□□□ -1.79
ATP2A3Q93084 AC010587.1-201ENST00000505809 469 ntBASIC3.86□□□□□ -1.79
ATP2A3Q93084 AC108078.1-201ENST00000508073 725 ntBASIC3.86□□□□□ -1.79
ATP2A3Q93084 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC3.86□□□□□ -1.79
ATP2A3Q93084 RNU6-314P-201ENST00000516574 104 ntBASIC3.86□□□□□ -1.79
ATP2A3Q93084 Vault.3-201ENST00000516676 95 ntBASIC3.86□□□□□ -1.79
ATP2A3Q93084 RNU6-528P-201ENST00000516926 100 ntBASIC3.86□□□□□ -1.79
ATP2A3Q93084 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.86□□□□□ -1.79
ATP2A3Q93084 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.86□□□□□ -1.79
ATP2A3Q93084 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.86□□□□□ -1.79
ATP2A3Q93084 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.86□□□□□ -1.79
ATP2A3Q93084 MIR3118-1-201ENST00000581787 76 ntBASIC3.86□□□□□ -1.79
ATP2A3Q93084 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.86□□□□□ -1.79
ATP2A3Q93084 AC007179.3-201ENST00000604976 235 ntBASIC3.86□□□□□ -1.79
ATP2A3Q93084 AP000860.1-201ENST00000605250 559 ntBASIC3.86□□□□□ -1.79
ATP2A3Q93084 SNORA62.6-201ENST00000606322 83 ntBASIC3.86□□□□□ -1.79
ATP2A3Q93084 AL592295.2-201ENST00000612578 206 ntBASIC3.86□□□□□ -1.79
ATP2A3Q93084 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC3.86□□□□□ -1.79
ATP2A3Q93084 AC112204.3-201ENST00000623822 332 ntBASIC3.86□□□□□ -1.79
ATP2A3Q93084 AC091953.2-201ENST00000623979 160 ntBASIC3.86□□□□□ -1.79
ATP2A3Q93084 CR381653.2-201ENST00000624041 768 ntBASIC3.86□□□□□ -1.79
ATP2A3Q93084 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.86□□□□□ -1.79
ATP2A3Q93084 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
ATP2A3Q93084 RPS4XP5-202ENST00000449995 1334 ntBASIC3.86□□□□□ -1.79
ATP2A3Q93084 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
ATP2A3Q93084 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
ATP2A3Q93084 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
ATP2A3Q93084 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.85□□□□□ -1.79
ATP2A3Q93084 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
ATP2A3Q93084 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.85□□□□□ -1.79
ATP2A3Q93084 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.85□□□□□ -1.79
ATP2A3Q93084 MIR183-201ENST00000384958 110 ntBASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms