Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC4.69□□□□□ -1.66
RTF1Q92541 FTH1P6-201ENST00000430768 320 ntBASIC4.69□□□□□ -1.66
RTF1Q92541 AL159987.2-201ENST00000432754 307 ntBASIC4.69□□□□□ -1.66
RTF1Q92541 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.69□□□□□ -1.66
RTF1Q92541 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.69□□□□□ -1.66
RTF1Q92541 MTND4LP16-201ENST00000440828 295 ntBASIC4.69□□□□□ -1.66
RTF1Q92541 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC4.69□□□□□ -1.66
RTF1Q92541 ST13P14-201ENST00000474095 734 ntBASIC4.69□□□□□ -1.66
RTF1Q92541 RNU6-1220P-201ENST00000517126 108 ntBASIC4.69□□□□□ -1.66
RTF1Q92541 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.69□□□□□ -1.66
RTF1Q92541 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.69□□□□□ -1.66
RTF1Q92541 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC4.69□□□□□ -1.66
RTF1Q92541 AC105224.1-201ENST00000587055 421 ntBASIC4.69□□□□□ -1.66
RTF1Q92541 SRGNP1-201ENST00000603392 451 ntBASIC4.69□□□□□ -1.66
RTF1Q92541 HMGB1P50-201ENST00000605814 607 ntBASIC4.69□□□□□ -1.66
RTF1Q92541 AC007038.2-201ENST00000608095 740 ntBASIC4.69□□□□□ -1.66
RTF1Q92541 AC004908.2-201ENST00000609090 574 ntBASIC4.69□□□□□ -1.66
RTF1Q92541 AC104260.1-201ENST00000616660 539 ntBASIC4.69□□□□□ -1.66
RTF1Q92541 AC040168.1-201ENST00000623594 991 ntBASIC4.69□□□□□ -1.66
RTF1Q92541 SRP54-214ENST00000630962 162 ntTSL 5 BASIC4.69□□□□□ -1.66
RTF1Q92541 AL732372.2-225ENST00000642124 456 ntBASIC4.69□□□□□ -1.66
RTF1Q92541 FAM35DP-201ENST00000323387 2712 ntBASIC4.69□□□□□ -1.66
RTF1Q92541 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
RTF1Q92541 AL139811.1-201ENST00000424779 2299 ntBASIC4.69□□□□□ -1.66
RTF1Q92541 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RTF1Q92541 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
RTF1Q92541 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
RTF1Q92541 RNA5SP72-201ENST00000364442 117 ntBASIC4.68□□□□□ -1.66
RTF1Q92541 RNY3P13-201ENST00000365542 102 ntBASIC4.68□□□□□ -1.66
RTF1Q92541 MIR34B-201ENST00000385076 84 ntBASIC4.68□□□□□ -1.66
RTF1Q92541 RNU6-821P-201ENST00000390995 107 ntBASIC4.68□□□□□ -1.66
RTF1Q92541 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RTF1Q92541 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.68□□□□□ -1.66
RTF1Q92541 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC4.68□□□□□ -1.66
RTF1Q92541 RPS7P15-201ENST00000415804 584 ntBASIC4.68□□□□□ -1.66
RTF1Q92541 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC4.68□□□□□ -1.66
RTF1Q92541 DBIP2-201ENST00000419076 262 ntBASIC4.68□□□□□ -1.66
RTF1Q92541 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC4.68□□□□□ -1.66
RTF1Q92541 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.68□□□□□ -1.66
RTF1Q92541 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.68□□□□□ -1.66
RTF1Q92541 MTND3P23-201ENST00000431980 347 ntBASIC4.68□□□□□ -1.66
RTF1Q92541 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC4.68□□□□□ -1.66
RTF1Q92541 MTND4P25-201ENST00000441039 533 ntBASIC4.68□□□□□ -1.66
RTF1Q92541 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC4.68□□□□□ -1.66
RTF1Q92541 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.68□□□□□ -1.66
RTF1Q92541 AC008628.2-201ENST00000502605 298 ntBASIC4.68□□□□□ -1.66
RTF1Q92541 AC017037.2-201ENST00000513850 890 ntBASIC4.68□□□□□ -1.66
RTF1Q92541 RNU6-835P-201ENST00000516974 104 ntBASIC4.68□□□□□ -1.66
RTF1Q92541 AC011979.2-201ENST00000527568 352 ntBASIC4.68□□□□□ -1.66
RTF1Q92541 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RTF1Q92541 AP003385.6-201ENST00000531603 374 ntBASIC4.68□□□□□ -1.66
RTF1Q92541 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC4.68□□□□□ -1.66
RTF1Q92541 NACA-211ENST00000548563 827 ntTSL 5 BASIC4.68□□□□□ -1.66
RTF1Q92541 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC4.68□□□□□ -1.66
RTF1Q92541 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC4.68□□□□□ -1.66
RTF1Q92541 FGF7P1-201ENST00000582820 288 ntBASIC4.68□□□□□ -1.66
RTF1Q92541 AC025946.2-201ENST00000603398 234 ntBASIC4.68□□□□□ -1.66
RTF1Q92541 AC008945.2-201ENST00000606056 604 ntBASIC4.68□□□□□ -1.66
RTF1Q92541 MIR486-1-201ENST00000612171 68 ntBASIC4.68□□□□□ -1.66
RTF1Q92541 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC4.68□□□□□ -1.66
RTF1Q92541 YWHAEP7-203ENST00000622054 312 ntBASIC4.68□□□□□ -1.66
RTF1Q92541 AP003355.3-201ENST00000623465 114 ntBASIC4.68□□□□□ -1.66
RTF1Q92541 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RTF1Q92541 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.68□□□□□ -1.66
RTF1Q92541 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
RTF1Q92541 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
RTF1Q92541 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.67□□□□□ -1.66
RTF1Q92541 MTND4P12-201ENST00000498999 1377 ntBASIC4.67□□□□□ -1.66
RTF1Q92541 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
RTF1Q92541 OR1S2-201ENST00000302592 978 ntBASIC4.67□□□□□ -1.66
RTF1Q92541 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
RTF1Q92541 SNORD56.2-201ENST00000363242 71 ntBASIC4.67□□□□□ -1.66
RTF1Q92541 Y_RNA.160-201ENST00000363677 92 ntBASIC4.67□□□□□ -1.66
RTF1Q92541 SNORA70E-201ENST00000384492 135 ntBASIC4.67□□□□□ -1.66
RTF1Q92541 RNU1-89P-201ENST00000384592 164 ntBASIC4.67□□□□□ -1.66
RTF1Q92541 AL356776.1-201ENST00000406574 447 ntBASIC4.67□□□□□ -1.66
RTF1Q92541 RNA5SP56-201ENST00000410277 118 ntBASIC4.67□□□□□ -1.66
RTF1Q92541 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC4.67□□□□□ -1.66
RTF1Q92541 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC4.67□□□□□ -1.66
RTF1Q92541 GTF2IP20-201ENST00000431663 360 ntBASIC4.67□□□□□ -1.66
RTF1Q92541 AC098614.3-201ENST00000438957 440 ntBASIC4.67□□□□□ -1.66
RTF1Q92541 USP9YP8-201ENST00000441913 500 ntBASIC4.67□□□□□ -1.66
RTF1Q92541 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC4.67□□□□□ -1.66
RTF1Q92541 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC4.67□□□□□ -1.66
RTF1Q92541 TPT1P14-201ENST00000448018 505 ntBASIC4.67□□□□□ -1.66
RTF1Q92541 AC140076.1-201ENST00000449897 361 ntBASIC4.67□□□□□ -1.66
RTF1Q92541 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC4.67□□□□□ -1.66
RTF1Q92541 SNRPGP6-201ENST00000451124 220 ntBASIC4.67□□□□□ -1.66
RTF1Q92541 AP000926.1-201ENST00000479573 241 ntBASIC4.67□□□□□ -1.66
RTF1Q92541 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.67□□□□□ -1.66
RTF1Q92541 AC018710.1-201ENST00000506509 158 ntBASIC4.67□□□□□ -1.66
RTF1Q92541 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
RTF1Q92541 AC025465.4-201ENST00000513422 638 ntBASIC4.67□□□□□ -1.66
RTF1Q92541 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC4.67□□□□□ -1.66
RTF1Q92541 SNORA40.12-201ENST00000516329 111 ntBASIC4.67□□□□□ -1.66
RTF1Q92541 MIR2114-201ENST00000516645 80 ntBASIC4.67□□□□□ -1.66
RTF1Q92541 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC4.67□□□□□ -1.66
RTF1Q92541 OR4R1P-201ENST00000529879 463 ntBASIC4.67□□□□□ -1.66
RTF1Q92541 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.67□□□□□ -1.66
RTF1Q92541 AC007458.1-201ENST00000542812 373 ntBASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms