Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC4.56□□□□□ -1.68
SH3RF3Q8TEJ3 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC4.56□□□□□ -1.68
SH3RF3Q8TEJ3 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.56□□□□□ -1.68
SH3RF3Q8TEJ3 AC093913.1-201ENST00000614178 329 ntBASIC4.56□□□□□ -1.68
SH3RF3Q8TEJ3 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC4.56□□□□□ -1.68
SH3RF3Q8TEJ3 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC4.56□□□□□ -1.68
SH3RF3Q8TEJ3 MIR6715B-201ENST00000637172 77 ntBASIC4.56□□□□□ -1.68
SH3RF3Q8TEJ3 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SH3RF3Q8TEJ3 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SH3RF3Q8TEJ3 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SH3RF3Q8TEJ3 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
SH3RF3Q8TEJ3 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
SH3RF3Q8TEJ3 AC006020.1-201ENST00000420179 1854 ntBASIC4.56□□□□□ -1.68
SH3RF3Q8TEJ3 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.56□□□□□ -1.68
SH3RF3Q8TEJ3 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SH3RF3Q8TEJ3 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
SH3RF3Q8TEJ3 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.55□□□□□ -1.68
SH3RF3Q8TEJ3 MAPK10-253ENST00000641010 4072 ntBASIC4.55□□□□□ -1.68
SH3RF3Q8TEJ3 OR11H5P-202ENST00000641612 1325 ntBASIC4.55□□□□□ -1.68
SH3RF3Q8TEJ3 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SH3RF3Q8TEJ3 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SH3RF3Q8TEJ3 Y_RNA.46-201ENST00000362695 102 ntBASIC4.55□□□□□ -1.68
SH3RF3Q8TEJ3 Y_RNA.188-201ENST00000363952 111 ntBASIC4.55□□□□□ -1.68
SH3RF3Q8TEJ3 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SH3RF3Q8TEJ3 MIR320C1-201ENST00000408566 88 ntBASIC4.55□□□□□ -1.68
SH3RF3Q8TEJ3 RNU2-3P-201ENST00000410144 191 ntBASIC4.55□□□□□ -1.68
SH3RF3Q8TEJ3 Y_RNA.615-201ENST00000410769 117 ntBASIC4.55□□□□□ -1.68
SH3RF3Q8TEJ3 PRELID3BP11-201ENST00000414230 479 ntBASIC4.55□□□□□ -1.68
SH3RF3Q8TEJ3 AL035423.1-201ENST00000420331 213 ntBASIC4.55□□□□□ -1.68
SH3RF3Q8TEJ3 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC4.55□□□□□ -1.68
SH3RF3Q8TEJ3 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC4.55□□□□□ -1.68
SH3RF3Q8TEJ3 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC4.55□□□□□ -1.68
SH3RF3Q8TEJ3 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC4.55□□□□□ -1.68
SH3RF3Q8TEJ3 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.55□□□□□ -1.68
SH3RF3Q8TEJ3 MTATP8P1-201ENST00000467115 207 ntBASIC4.55□□□□□ -1.68
SH3RF3Q8TEJ3 VN1R17P-201ENST00000472048 1090 ntBASIC4.55□□□□□ -1.68
SH3RF3Q8TEJ3 RAD51AP1P1-201ENST00000484195 1001 ntBASIC4.55□□□□□ -1.68
SH3RF3Q8TEJ3 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC4.55□□□□□ -1.68
SH3RF3Q8TEJ3 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SH3RF3Q8TEJ3 RAC1P2-201ENST00000511164 579 ntBASIC4.55□□□□□ -1.68
SH3RF3Q8TEJ3 AP003072.2-201ENST00000527756 676 ntBASIC4.55□□□□□ -1.68
SH3RF3Q8TEJ3 AC093519.1-201ENST00000566109 298 ntBASIC4.55□□□□□ -1.68
SH3RF3Q8TEJ3 RNU1-30P-201ENST00000606575 163 ntBASIC4.55□□□□□ -1.68
SH3RF3Q8TEJ3 OR6R2P-201ENST00000609216 300 ntBASIC4.55□□□□□ -1.68
SH3RF3Q8TEJ3 AC244517.12-201ENST00000623581 663 ntBASIC4.55□□□□□ -1.68
SH3RF3Q8TEJ3 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.55□□□□□ -1.68
SH3RF3Q8TEJ3 AC009093.8-201ENST00000641769 292 ntBASIC4.55□□□□□ -1.68
SH3RF3Q8TEJ3 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
SH3RF3Q8TEJ3 MAPK10-372ENST00000641954 3413 ntBASIC4.55□□□□□ -1.68
SH3RF3Q8TEJ3 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
SH3RF3Q8TEJ3 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
SH3RF3Q8TEJ3 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.55□□□□□ -1.68
SH3RF3Q8TEJ3 KPNA2P2-201ENST00000419546 1489 ntBASIC4.55□□□□□ -1.68
SH3RF3Q8TEJ3 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.55□□□□□ -1.68
SH3RF3Q8TEJ3 OFD1P5Y-201ENST00000447585 2590 ntBASIC4.55□□□□□ -1.68
SH3RF3Q8TEJ3 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.55□□□□□ -1.68
SH3RF3Q8TEJ3 AC092447.10-201ENST00000620607 1652 ntBASIC4.54□□□□□ -1.68
SH3RF3Q8TEJ3 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.54□□□□□ -1.68
SH3RF3Q8TEJ3 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.54□□□□□ -1.68
SH3RF3Q8TEJ3 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
SH3RF3Q8TEJ3 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.54□□□□□ -1.68
SH3RF3Q8TEJ3 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SH3RF3Q8TEJ3 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
SH3RF3Q8TEJ3 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SH3RF3Q8TEJ3 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SH3RF3Q8TEJ3 OR1S2-201ENST00000302592 978 ntBASIC4.54□□□□□ -1.68
SH3RF3Q8TEJ3 AC073343.1-201ENST00000328239 651 ntBASIC4.54□□□□□ -1.68
SH3RF3Q8TEJ3 RNU6-289P-201ENST00000364093 107 ntBASIC4.54□□□□□ -1.68
SH3RF3Q8TEJ3 Y_RNA.339-201ENST00000365325 102 ntBASIC4.54□□□□□ -1.68
SH3RF3Q8TEJ3 RNU6-169P-201ENST00000365336 107 ntBASIC4.54□□□□□ -1.68
SH3RF3Q8TEJ3 SNORA63.7-201ENST00000365579 123 ntBASIC4.54□□□□□ -1.68
SH3RF3Q8TEJ3 RNU4-20P-201ENST00000365601 151 ntBASIC4.54□□□□□ -1.68
SH3RF3Q8TEJ3 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.54□□□□□ -1.68
SH3RF3Q8TEJ3 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
SH3RF3Q8TEJ3 CISD1P1-201ENST00000393907 327 ntBASIC4.54□□□□□ -1.68
SH3RF3Q8TEJ3 AL591416.1-201ENST00000404015 867 ntBASIC4.54□□□□□ -1.68
SH3RF3Q8TEJ3 MIR548I3-201ENST00000408378 149 ntBASIC4.54□□□□□ -1.68
SH3RF3Q8TEJ3 MIR548I1-201ENST00000408810 149 ntBASIC4.54□□□□□ -1.68
SH3RF3Q8TEJ3 RNU6-985P-201ENST00000410182 104 ntBASIC4.54□□□□□ -1.68
SH3RF3Q8TEJ3 RNU2-9P-201ENST00000410194 145 ntBASIC4.54□□□□□ -1.68
SH3RF3Q8TEJ3 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.54□□□□□ -1.68
SH3RF3Q8TEJ3 AL451054.2-201ENST00000420896 202 ntBASIC4.54□□□□□ -1.68
SH3RF3Q8TEJ3 HSPE1P1-201ENST00000421494 318 ntBASIC4.54□□□□□ -1.68
SH3RF3Q8TEJ3 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.54□□□□□ -1.68
SH3RF3Q8TEJ3 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC4.54□□□□□ -1.68
SH3RF3Q8TEJ3 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.54□□□□□ -1.68
SH3RF3Q8TEJ3 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC4.54□□□□□ -1.68
SH3RF3Q8TEJ3 AL136380.1-201ENST00000447970 162 ntBASIC4.54□□□□□ -1.68
SH3RF3Q8TEJ3 AC078785.3-201ENST00000476607 425 ntBASIC4.54□□□□□ -1.68
SH3RF3Q8TEJ3 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC4.54□□□□□ -1.68
SH3RF3Q8TEJ3 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC4.54□□□□□ -1.68
SH3RF3Q8TEJ3 RNU6-1271P-201ENST00000517049 105 ntBASIC4.54□□□□□ -1.68
SH3RF3Q8TEJ3 RNU6-1220P-201ENST00000517126 108 ntBASIC4.54□□□□□ -1.68
SH3RF3Q8TEJ3 AC022616.6-201ENST00000520479 119 ntBASIC4.54□□□□□ -1.68
SH3RF3Q8TEJ3 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.54□□□□□ -1.68
SH3RF3Q8TEJ3 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC4.54□□□□□ -1.68
SH3RF3Q8TEJ3 PTP4A1P6-201ENST00000531034 478 ntBASIC4.54□□□□□ -1.68
SH3RF3Q8TEJ3 AP000889.2-201ENST00000532684 490 ntBASIC4.54□□□□□ -1.68
SH3RF3Q8TEJ3 ARL1-211ENST00000551828 776 ntTSL 5 BASIC4.54□□□□□ -1.68
SH3RF3Q8TEJ3 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms