Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 RPL7AP49-201ENST00000429522 581 ntBASIC6.15□□□□□ -1.42
NKX2-3Q8TAU0 AL591438.1-201ENST00000433508 581 ntBASIC6.15□□□□□ -1.42
NKX2-3Q8TAU0 AL590399.4-201ENST00000436561 601 ntBASIC6.15□□□□□ -1.42
NKX2-3Q8TAU0 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC6.15□□□□□ -1.42
NKX2-3Q8TAU0 Z92846.1-201ENST00000456203 268 ntBASIC6.15□□□□□ -1.42
NKX2-3Q8TAU0 AC022034.3-201ENST00000471393 478 ntBASIC6.15□□□□□ -1.42
NKX2-3Q8TAU0 RN7SL817P-201ENST00000480777 288 ntBASIC6.15□□□□□ -1.42
NKX2-3Q8TAU0 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC6.15□□□□□ -1.42
NKX2-3Q8TAU0 RNU5F-8P-201ENST00000515941 111 ntBASIC6.15□□□□□ -1.42
NKX2-3Q8TAU0 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC6.15□□□□□ -1.42
NKX2-3Q8TAU0 RN7SL290P-201ENST00000578661 300 ntBASIC6.15□□□□□ -1.42
NKX2-3Q8TAU0 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC6.15□□□□□ -1.42
NKX2-3Q8TAU0 BDH2P1-201ENST00000602288 736 ntBASIC6.15□□□□□ -1.42
NKX2-3Q8TAU0 uc_338.7-201ENST00000621834 124 ntBASIC6.15□□□□□ -1.42
NKX2-3Q8TAU0 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
NKX2-3Q8TAU0 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.43
NKX2-3Q8TAU0 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
NKX2-3Q8TAU0 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
NKX2-3Q8TAU0 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC6.15□□□□□ -1.43
NKX2-3Q8TAU0 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC6.15□□□□□ -1.43
NKX2-3Q8TAU0 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.43
NKX2-3Q8TAU0 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
NKX2-3Q8TAU0 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC6.15□□□□□ -1.43
NKX2-3Q8TAU0 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
NKX2-3Q8TAU0 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
NKX2-3Q8TAU0 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
NKX2-3Q8TAU0 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC6.14□□□□□ -1.43
NKX2-3Q8TAU0 AC092681.1-201ENST00000297369 291 ntBASIC6.14□□□□□ -1.43
NKX2-3Q8TAU0 Y_RNA.275-201ENST00000364726 110 ntBASIC6.14□□□□□ -1.43
NKX2-3Q8TAU0 RNU6-1226P-201ENST00000384317 107 ntBASIC6.14□□□□□ -1.43
NKX2-3Q8TAU0 MIR92A2-201ENST00000385299 75 ntBASIC6.14□□□□□ -1.43
NKX2-3Q8TAU0 RNA5SP494-201ENST00000410653 129 ntBASIC6.14□□□□□ -1.43
NKX2-3Q8TAU0 snoU13.20-201ENST00000459180 104 ntBASIC6.14□□□□□ -1.43
NKX2-3Q8TAU0 AC133134.1-201ENST00000466800 359 ntBASIC6.14□□□□□ -1.43
NKX2-3Q8TAU0 AC097462.2-201ENST00000504623 481 ntBASIC6.14□□□□□ -1.43
NKX2-3Q8TAU0 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC6.14□□□□□ -1.43
NKX2-3Q8TAU0 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC6.14□□□□□ -1.43
NKX2-3Q8TAU0 MDM2-232ENST00000544561 213 ntTSL 5 BASIC6.14□□□□□ -1.43
NKX2-3Q8TAU0 MEG8-215ENST00000555354 469 ntTSL 3 BASIC6.14□□□□□ -1.43
NKX2-3Q8TAU0 AC120057.2-201ENST00000571520 271 ntBASIC6.14□□□□□ -1.43
NKX2-3Q8TAU0 MIR4284-201ENST00000578924 81 ntBASIC6.14□□□□□ -1.43
NKX2-3Q8TAU0 MIR4270-201ENST00000581799 70 ntBASIC6.14□□□□□ -1.43
NKX2-3Q8TAU0 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC6.14□□□□□ -1.43
NKX2-3Q8TAU0 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC6.14□□□□□ -1.43
NKX2-3Q8TAU0 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC6.14□□□□□ -1.43
NKX2-3Q8TAU0 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
NKX2-3Q8TAU0 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
NKX2-3Q8TAU0 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
NKX2-3Q8TAU0 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC6.14□□□□□ -1.43
NKX2-3Q8TAU0 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC6.14□□□□□ -1.43
NKX2-3Q8TAU0 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
NKX2-3Q8TAU0 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
NKX2-3Q8TAU0 AP005432.1-201ENST00000580891 3485 ntBASIC6.13□□□□□ -1.43
NKX2-3Q8TAU0 AC009951.1-201ENST00000623674 2614 ntBASIC6.13□□□□□ -1.43
NKX2-3Q8TAU0 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
NKX2-3Q8TAU0 ABCC13-202ENST00000463099 3842 ntBASIC6.13□□□□□ -1.43
NKX2-3Q8TAU0 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
NKX2-3Q8TAU0 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC6.13□□□□□ -1.43
NKX2-3Q8TAU0 RNU6-923P-201ENST00000364753 107 ntBASIC6.13□□□□□ -1.43
NKX2-3Q8TAU0 RNU6-937P-201ENST00000384325 106 ntBASIC6.13□□□□□ -1.43
NKX2-3Q8TAU0 RNU2-50P-201ENST00000410494 143 ntBASIC6.13□□□□□ -1.43
NKX2-3Q8TAU0 AC069213.2-201ENST00000420238 366 ntBASIC6.13□□□□□ -1.43
NKX2-3Q8TAU0 TOMM20P4-201ENST00000427861 435 ntBASIC6.13□□□□□ -1.43
NKX2-3Q8TAU0 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC6.13□□□□□ -1.43
NKX2-3Q8TAU0 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC6.13□□□□□ -1.43
NKX2-3Q8TAU0 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
NKX2-3Q8TAU0 IGLV2-34-201ENST00000490007 283 ntBASIC6.13□□□□□ -1.43
NKX2-3Q8TAU0 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC6.13□□□□□ -1.43
NKX2-3Q8TAU0 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC6.13□□□□□ -1.43
NKX2-3Q8TAU0 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC6.13□□□□□ -1.43
NKX2-3Q8TAU0 AL110118.1-201ENST00000553543 400 ntBASIC6.13□□□□□ -1.43
NKX2-3Q8TAU0 TRAV32-201ENST00000553993 340 ntBASIC6.13□□□□□ -1.43
NKX2-3Q8TAU0 H3F3AP1-201ENST00000559984 334 ntBASIC6.13□□□□□ -1.43
NKX2-3Q8TAU0 AC136624.4-201ENST00000573044 370 ntBASIC6.13□□□□□ -1.43
NKX2-3Q8TAU0 AL020997.2-201ENST00000602607 184 ntBASIC6.13□□□□□ -1.43
NKX2-3Q8TAU0 AC037487.3-201ENST00000606668 112 ntBASIC6.13□□□□□ -1.43
NKX2-3Q8TAU0 AC240442.1-201ENST00000616055 283 ntBASIC6.13□□□□□ -1.43
NKX2-3Q8TAU0 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC6.13□□□□□ -1.43
NKX2-3Q8TAU0 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
NKX2-3Q8TAU0 MTND5P9-201ENST00000503854 1755 ntBASIC6.13□□□□□ -1.43
NKX2-3Q8TAU0 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
NKX2-3Q8TAU0 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
NKX2-3Q8TAU0 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC6.13□□□□□ -1.43
NKX2-3Q8TAU0 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC6.12□□□□□ -1.43
NKX2-3Q8TAU0 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC6.12□□□□□ -1.43
NKX2-3Q8TAU0 RN7SKP113-201ENST00000363891 295 ntBASIC6.12□□□□□ -1.43
NKX2-3Q8TAU0 RNU6-371P-201ENST00000364283 108 ntBASIC6.12□□□□□ -1.43
NKX2-3Q8TAU0 SNORA70.2-201ENST00000364506 135 ntBASIC6.12□□□□□ -1.43
NKX2-3Q8TAU0 RNU6-898P-201ENST00000365627 104 ntBASIC6.12□□□□□ -1.43
NKX2-3Q8TAU0 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
NKX2-3Q8TAU0 RNA5SP241-201ENST00000391326 114 ntBASIC6.12□□□□□ -1.43
NKX2-3Q8TAU0 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
NKX2-3Q8TAU0 ALB-202ENST00000401494 1659 ntTSL 5 BASIC6.12□□□□□ -1.43
NKX2-3Q8TAU0 HSPA8P15-201ENST00000401676 786 ntBASIC6.12□□□□□ -1.43
NKX2-3Q8TAU0 AL590704.1-201ENST00000402856 794 ntBASIC6.12□□□□□ -1.43
NKX2-3Q8TAU0 RNU2-15P-201ENST00000410692 191 ntBASIC6.12□□□□□ -1.43
NKX2-3Q8TAU0 RNU6-651P-201ENST00000411040 105 ntBASIC6.12□□□□□ -1.43
NKX2-3Q8TAU0 AL160275.3-201ENST00000423876 471 ntBASIC6.12□□□□□ -1.43
NKX2-3Q8TAU0 RPL19P16-201ENST00000433839 588 ntBASIC6.12□□□□□ -1.43
NKX2-3Q8TAU0 SLC2A3P1-201ENST00000519666 1451 ntBASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms