Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 RNU6-1180P-201ENST00000364935 107 ntBASIC0.54□□□□□ -2.32
SYNE1Q8NF91 RNA5SP240-201ENST00000365355 128 ntBASIC0.54□□□□□ -2.32
SYNE1Q8NF91 AL445669.1-201ENST00000426743 755 ntBASIC0.54□□□□□ -2.32
SYNE1Q8NF91 RPL7P29-201ENST00000437151 728 ntBASIC0.54□□□□□ -2.32
SYNE1Q8NF91 MTND3P24-201ENST00000506306 329 ntBASIC0.54□□□□□ -2.32
SYNE1Q8NF91 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC0.54□□□□□ -2.32
SYNE1Q8NF91 RNU6ATAC9P-201ENST00000516210 116 ntBASIC0.54□□□□□ -2.32
SYNE1Q8NF91 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC0.54□□□□□ -2.32
SYNE1Q8NF91 AL078603.1-201ENST00000603824 313 ntBASIC0.54□□□□□ -2.32
SYNE1Q8NF91 AC011374.2-201ENST00000607135 526 ntBASIC0.54□□□□□ -2.32
SYNE1Q8NF91 AC025016.1-201ENST00000616746 682 ntBASIC0.54□□□□□ -2.32
SYNE1Q8NF91 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC0.54□□□□□ -2.32
SYNE1Q8NF91 HAUS6P2-201ENST00000433254 2404 ntBASIC0.54□□□□□ -2.32
SYNE1Q8NF91 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
SYNE1Q8NF91 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC0.53□□□□□ -2.32
SYNE1Q8NF91 Y_RNA.493-201ENST00000384422 102 ntBASIC0.53□□□□□ -2.32
SYNE1Q8NF91 AL627390.1-201ENST00000396055 340 ntBASIC0.53□□□□□ -2.32
SYNE1Q8NF91 RNA5SP489-201ENST00000410986 109 ntBASIC0.53□□□□□ -2.32
SYNE1Q8NF91 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC0.53□□□□□ -2.32
SYNE1Q8NF91 MTATP6P4-201ENST00000427725 675 ntBASIC0.53□□□□□ -2.32
SYNE1Q8NF91 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC0.53□□□□□ -2.32
SYNE1Q8NF91 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC0.53□□□□□ -2.32
SYNE1Q8NF91 RPS29P29-201ENST00000456396 171 ntBASIC0.53□□□□□ -2.32
SYNE1Q8NF91 RPS15AP17-201ENST00000470598 390 ntBASIC0.53□□□□□ -2.32
SYNE1Q8NF91 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC0.53□□□□□ -2.32
SYNE1Q8NF91 RNU6-405P-201ENST00000516637 110 ntBASIC0.53□□□□□ -2.32
SYNE1Q8NF91 RNU6-467P-201ENST00000517027 110 ntBASIC0.53□□□□□ -2.32
SYNE1Q8NF91 MIR3921-201ENST00000577308 85 ntBASIC0.53□□□□□ -2.32
SYNE1Q8NF91 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC0.53□□□□□ -2.32
SYNE1Q8NF91 AL512598.1-201ENST00000610158 273 ntBASIC0.53□□□□□ -2.32
SYNE1Q8NF91 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC0.53□□□□□ -2.32
SYNE1Q8NF91 MIR153-1-201ENST00000384914 90 ntBASIC0.53□□□□□ -2.32
SYNE1Q8NF91 RPL27AP8-201ENST00000424277 446 ntBASIC0.53□□□□□ -2.32
SYNE1Q8NF91 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC0.53□□□□□ -2.32
SYNE1Q8NF91 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC0.53□□□□□ -2.32
SYNE1Q8NF91 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC0.53□□□□□ -2.32
SYNE1Q8NF91 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC0.53□□□□□ -2.32
SYNE1Q8NF91 AC021087.2-201ENST00000504656 1203 ntBASIC0.53□□□□□ -2.32
SYNE1Q8NF91 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC0.53□□□□□ -2.32
SYNE1Q8NF91 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC0.53□□□□□ -2.32
SYNE1Q8NF91 MIR3117-201ENST00000584034 78 ntBASIC0.53□□□□□ -2.32
SYNE1Q8NF91 AL355810.1-201ENST00000614629 552 ntBASIC0.53□□□□□ -2.32
SYNE1Q8NF91 AC110079.1-202ENST00000635213 138 ntBASIC0.53□□□□□ -2.32
SYNE1Q8NF91 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC0.53□□□□□ -2.32
SYNE1Q8NF91 NUP58P1-201ENST00000502546 1738 ntBASIC0.53□□□□□ -2.32
SYNE1Q8NF91 PCF11-AS1-201ENST00000602322 1516 ntBASIC0.53□□□□□ -2.32
SYNE1Q8NF91 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC0.53□□□□□ -2.32
SYNE1Q8NF91 Y_RNA.393-201ENST00000383936 102 ntBASIC0.53□□□□□ -2.32
SYNE1Q8NF91 TOMM22P1-201ENST00000418578 312 ntBASIC0.53□□□□□ -2.32
SYNE1Q8NF91 AC097499.1-201ENST00000444277 208 ntBASIC0.53□□□□□ -2.32
SYNE1Q8NF91 AC234775.1-201ENST00000454247 670 ntBASIC0.53□□□□□ -2.32
SYNE1Q8NF91 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
SYNE1Q8NF91 AC105914.1-201ENST00000511798 226 ntBASIC0.53□□□□□ -2.32
SYNE1Q8NF91 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC0.53□□□□□ -2.32
SYNE1Q8NF91 AC025281.1-201ENST00000567026 265 ntBASIC0.53□□□□□ -2.32
SYNE1Q8NF91 AC115085.1-201ENST00000588924 229 ntBASIC0.53□□□□□ -2.32
SYNE1Q8NF91 RPS15AP11-201ENST00000594193 385 ntBASIC0.53□□□□□ -2.32
SYNE1Q8NF91 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC0.53□□□□□ -2.32
SYNE1Q8NF91 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC0.53□□□□□ -2.32
SYNE1Q8NF91 AL391597.1-201ENST00000618707 694 ntBASIC0.53□□□□□ -2.32
SYNE1Q8NF91 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC0.53□□□□□ -2.32
SYNE1Q8NF91 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC0.53□□□□□ -2.32
SYNE1Q8NF91 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC0.53□□□□□ -2.32
SYNE1Q8NF91 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC0.53□□□□□ -2.32
SYNE1Q8NF91 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC0.53□□□□□ -2.32
SYNE1Q8NF91 RNU1-52P-201ENST00000384190 164 ntBASIC0.53□□□□□ -2.32
SYNE1Q8NF91 OSTCP8-201ENST00000445117 448 ntBASIC0.53□□□□□ -2.32
SYNE1Q8NF91 MTND1P33-201ENST00000446251 917 ntBASIC0.53□□□□□ -2.32
SYNE1Q8NF91 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC0.53□□□□□ -2.32
SYNE1Q8NF91 RPS15AP36-201ENST00000492022 382 ntBASIC0.53□□□□□ -2.32
SYNE1Q8NF91 AC090543.1-201ENST00000492168 485 ntBASIC0.53□□□□□ -2.32
SYNE1Q8NF91 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC0.53□□□□□ -2.32
SYNE1Q8NF91 RPL37P25-201ENST00000507308 276 ntBASIC0.53□□□□□ -2.32
SYNE1Q8NF91 RNU6-488P-201ENST00000515918 99 ntBASIC0.53□□□□□ -2.32
SYNE1Q8NF91 RNA5SP102-201ENST00000516865 106 ntBASIC0.53□□□□□ -2.32
SYNE1Q8NF91 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC0.53□□□□□ -2.32
SYNE1Q8NF91 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC0.53□□□□□ -2.32
SYNE1Q8NF91 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC0.53□□□□□ -2.32
SYNE1Q8NF91 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC0.53□□□□□ -2.32
SYNE1Q8NF91 AC068880.5-201ENST00000624331 290 ntBASIC0.53□□□□□ -2.32
SYNE1Q8NF91 AC119674.1-220ENST00000641502 1048 ntBASIC0.53□□□□□ -2.32
SYNE1Q8NF91 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC0.53□□□□□ -2.32
SYNE1Q8NF91 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.53□□□□□ -2.32
SYNE1Q8NF91 AC233728.2-201ENST00000425348 757 ntBASIC0.53□□□□□ -2.32
SYNE1Q8NF91 HMGB1P45-201ENST00000435986 653 ntBASIC0.53□□□□□ -2.32
SYNE1Q8NF91 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC0.53□□□□□ -2.32
SYNE1Q8NF91 ARPC3P1-201ENST00000437218 533 ntBASIC0.53□□□□□ -2.32
SYNE1Q8NF91 AL357134.1-201ENST00000445848 426 ntBASIC0.53□□□□□ -2.32
SYNE1Q8NF91 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC0.53□□□□□ -2.32
SYNE1Q8NF91 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC0.53□□□□□ -2.32
SYNE1Q8NF91 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC0.53□□□□□ -2.32
SYNE1Q8NF91 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
SYNE1Q8NF91 MTCO2P32-201ENST00000514865 403 ntBASIC0.53□□□□□ -2.32
SYNE1Q8NF91 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC0.53□□□□□ -2.32
SYNE1Q8NF91 AC092470.1-201ENST00000546187 132 ntBASIC0.53□□□□□ -2.32
SYNE1Q8NF91 AC013444.2-201ENST00000603317 787 ntBASIC0.53□□□□□ -2.32
SYNE1Q8NF91 AC020658.4-201ENST00000613987 684 ntBASIC0.53□□□□□ -2.32
SYNE1Q8NF91 AL138880.2-201ENST00000616214 239 ntBASIC0.53□□□□□ -2.32
SYNE1Q8NF91 AC091895.1-201ENST00000624494 256 ntBASIC0.53□□□□□ -2.32
SYNE1Q8NF91 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC0.53□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms