Protein–RNA interactions for Protein: Q8NDX5

PHC3, Polyhomeotic-like protein 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3Q8NDX5 SNORD62.1-201ENST00000362541 86 ntBASIC4.86□□□□□ -1.63
PHC3Q8NDX5 RNA5SP235-201ENST00000365411 114 ntBASIC4.86□□□□□ -1.63
PHC3Q8NDX5 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PHC3Q8NDX5 RNU6-1106P-201ENST00000390845 107 ntBASIC4.86□□□□□ -1.63
PHC3Q8NDX5 AC113618.1-201ENST00000416747 285 ntBASIC4.86□□□□□ -1.63
PHC3Q8NDX5 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC4.86□□□□□ -1.63
PHC3Q8NDX5 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.86□□□□□ -1.63
PHC3Q8NDX5 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC4.86□□□□□ -1.63
PHC3Q8NDX5 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.86□□□□□ -1.63
PHC3Q8NDX5 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.86□□□□□ -1.63
PHC3Q8NDX5 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.86□□□□□ -1.63
PHC3Q8NDX5 AL691482.1-201ENST00000453255 87 ntBASIC4.86□□□□□ -1.63
PHC3Q8NDX5 CYCSP34-201ENST00000458172 304 ntBASIC4.86□□□□□ -1.63
PHC3Q8NDX5 AC084198.1-201ENST00000477747 402 ntBASIC4.86□□□□□ -1.63
PHC3Q8NDX5 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC4.86□□□□□ -1.63
PHC3Q8NDX5 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.86□□□□□ -1.63
PHC3Q8NDX5 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.86□□□□□ -1.63
PHC3Q8NDX5 AC090281.1-201ENST00000523019 276 ntBASIC4.86□□□□□ -1.63
PHC3Q8NDX5 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC4.86□□□□□ -1.63
PHC3Q8NDX5 AC021006.3-201ENST00000530771 192 ntBASIC4.86□□□□□ -1.63
PHC3Q8NDX5 SNRPGP16-201ENST00000533275 226 ntBASIC4.86□□□□□ -1.63
PHC3Q8NDX5 AC005868.1-201ENST00000536421 331 ntBASIC4.86□□□□□ -1.63
PHC3Q8NDX5 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.86□□□□□ -1.63
PHC3Q8NDX5 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.86□□□□□ -1.63
PHC3Q8NDX5 FAM60BP-201ENST00000578364 658 ntBASIC4.86□□□□□ -1.63
PHC3Q8NDX5 MIR548AC-201ENST00000585049 88 ntBASIC4.86□□□□□ -1.63
PHC3Q8NDX5 AC011487.3-201ENST00000593607 453 ntBASIC4.86□□□□□ -1.63
PHC3Q8NDX5 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.86□□□□□ -1.63
PHC3Q8NDX5 AL354984.3-201ENST00000604803 325 ntBASIC4.86□□□□□ -1.63
PHC3Q8NDX5 SNX18P1Y-201ENST00000616231 511 ntBASIC4.86□□□□□ -1.63
PHC3Q8NDX5 AC092608.2-201ENST00000624427 218 ntBASIC4.86□□□□□ -1.63
PHC3Q8NDX5 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PHC3Q8NDX5 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PHC3Q8NDX5 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PHC3Q8NDX5 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
PHC3Q8NDX5 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.86□□□□□ -1.63
PHC3Q8NDX5 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
PHC3Q8NDX5 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PHC3Q8NDX5 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PHC3Q8NDX5 AC006971.1-201ENST00000407916 4486 ntBASIC4.85□□□□□ -1.63
PHC3Q8NDX5 RNA5SP52-201ENST00000362448 134 ntBASIC4.85□□□□□ -1.63
PHC3Q8NDX5 Y_RNA.148-201ENST00000363557 117 ntBASIC4.85□□□□□ -1.63
PHC3Q8NDX5 RNU6-371P-201ENST00000364283 108 ntBASIC4.85□□□□□ -1.63
PHC3Q8NDX5 RNU6-463P-201ENST00000384340 107 ntBASIC4.85□□□□□ -1.63
PHC3Q8NDX5 AL109941.1-201ENST00000401925 229 ntBASIC4.85□□□□□ -1.63
PHC3Q8NDX5 Y_RNA.594-201ENST00000410373 140 ntBASIC4.85□□□□□ -1.63
PHC3Q8NDX5 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.85□□□□□ -1.63
PHC3Q8NDX5 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.85□□□□□ -1.63
PHC3Q8NDX5 OR2AM1P-201ENST00000422137 422 ntBASIC4.85□□□□□ -1.63
PHC3Q8NDX5 UBE2V1P4-201ENST00000425374 344 ntBASIC4.85□□□□□ -1.63
PHC3Q8NDX5 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.85□□□□□ -1.63
PHC3Q8NDX5 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.85□□□□□ -1.63
PHC3Q8NDX5 AC236972.1-201ENST00000433225 199 ntBASIC4.85□□□□□ -1.63
PHC3Q8NDX5 AC073063.1-201ENST00000434352 607 ntBASIC4.85□□□□□ -1.63
PHC3Q8NDX5 HIGD1AP11-201ENST00000438361 280 ntBASIC4.85□□□□□ -1.63
PHC3Q8NDX5 AC112498.1-201ENST00000444401 332 ntBASIC4.85□□□□□ -1.63
PHC3Q8NDX5 AC087588.1-201ENST00000462203 316 ntBASIC4.85□□□□□ -1.63
PHC3Q8NDX5 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC4.85□□□□□ -1.63
PHC3Q8NDX5 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.85□□□□□ -1.63
PHC3Q8NDX5 AC021146.2-201ENST00000504736 556 ntBASIC4.85□□□□□ -1.63
PHC3Q8NDX5 RNA5SP249-201ENST00000516127 99 ntBASIC4.85□□□□□ -1.63
PHC3Q8NDX5 RNU6-143P-201ENST00000516942 93 ntBASIC4.85□□□□□ -1.63
PHC3Q8NDX5 AP000676.2-201ENST00000529711 301 ntBASIC4.85□□□□□ -1.63
PHC3Q8NDX5 AC008033.2-201ENST00000542626 177 ntBASIC4.85□□□□□ -1.63
PHC3Q8NDX5 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC4.85□□□□□ -1.63
PHC3Q8NDX5 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC4.85□□□□□ -1.63
PHC3Q8NDX5 MIR4436B2-201ENST00000581415 91 ntBASIC4.85□□□□□ -1.63
PHC3Q8NDX5 MIR4436B1-201ENST00000583272 91 ntBASIC4.85□□□□□ -1.63
PHC3Q8NDX5 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.85□□□□□ -1.63
PHC3Q8NDX5 HMGB2P1-201ENST00000591146 634 ntBASIC4.85□□□□□ -1.63
PHC3Q8NDX5 AC002545.1-201ENST00000592511 181 ntBASIC4.85□□□□□ -1.63
PHC3Q8NDX5 AC007938.3-201ENST00000604965 623 ntBASIC4.85□□□□□ -1.63
PHC3Q8NDX5 AC107294.1-201ENST00000609524 467 ntBASIC4.85□□□□□ -1.63
PHC3Q8NDX5 DLEU2_5.1-201ENST00000615567 84 ntBASIC4.85□□□□□ -1.63
PHC3Q8NDX5 AC019206.1-201ENST00000621938 425 ntBASIC4.85□□□□□ -1.63
PHC3Q8NDX5 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
PHC3Q8NDX5 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.85□□□□□ -1.63
PHC3Q8NDX5 MTND4P1-201ENST00000457501 1466 ntBASIC4.85□□□□□ -1.63
PHC3Q8NDX5 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.85□□□□□ -1.63
PHC3Q8NDX5 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.85□□□□□ -1.63
PHC3Q8NDX5 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PHC3Q8NDX5 AC025031.4-201ENST00000621248 3271 ntBASIC4.85□□□□□ -1.63
PHC3Q8NDX5 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PHC3Q8NDX5 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PHC3Q8NDX5 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.85□□□□□ -1.63
PHC3Q8NDX5 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PHC3Q8NDX5 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
PHC3Q8NDX5 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.84□□□□□ -1.63
PHC3Q8NDX5 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
PHC3Q8NDX5 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
PHC3Q8NDX5 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
PHC3Q8NDX5 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
PHC3Q8NDX5 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.84□□□□□ -1.63
PHC3Q8NDX5 Y_RNA.5-201ENST00000362334 102 ntBASIC4.84□□□□□ -1.63
PHC3Q8NDX5 SNORA75.6-201ENST00000391318 127 ntBASIC4.84□□□□□ -1.63
PHC3Q8NDX5 AL356057.3-201ENST00000402607 340 ntBASIC4.84□□□□□ -1.63
PHC3Q8NDX5 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.84□□□□□ -1.63
PHC3Q8NDX5 Z99755.1-201ENST00000414048 380 ntBASIC4.84□□□□□ -1.63
PHC3Q8NDX5 AC244098.2-201ENST00000422068 99 ntBASIC4.84□□□□□ -1.63
PHC3Q8NDX5 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms