Protein–RNA interactions for Protein: Q8N4Q1

CHCHD4, Mitochondrial intermembrane space import and assembly protein 40, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4Q8N4Q1 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.18□□□□□ -1.9
CHCHD4Q8N4Q1 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC3.18□□□□□ -1.9
CHCHD4Q8N4Q1 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.18□□□□□ -1.9
CHCHD4Q8N4Q1 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.18□□□□□ -1.9
CHCHD4Q8N4Q1 AC022662.1-201ENST00000580252 331 ntBASIC3.18□□□□□ -1.9
CHCHD4Q8N4Q1 AC090616.3-201ENST00000582184 217 ntBASIC3.18□□□□□ -1.9
CHCHD4Q8N4Q1 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC3.18□□□□□ -1.9
CHCHD4Q8N4Q1 AC024560.3-201ENST00000608482 349 ntBASIC3.18□□□□□ -1.9
CHCHD4Q8N4Q1 U1.23-201ENST00000610293 146 ntBASIC3.18□□□□□ -1.9
CHCHD4Q8N4Q1 RNU1-68P-201ENST00000615382 146 ntBASIC3.18□□□□□ -1.9
CHCHD4Q8N4Q1 U1.39-201ENST00000621562 146 ntBASIC3.18□□□□□ -1.9
CHCHD4Q8N4Q1 AC099506.2-201ENST00000623074 221 ntBASIC3.18□□□□□ -1.9
CHCHD4Q8N4Q1 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CHCHD4Q8N4Q1 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CHCHD4Q8N4Q1 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CHCHD4Q8N4Q1 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CHCHD4Q8N4Q1 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.17□□□□□ -1.9
CHCHD4Q8N4Q1 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CHCHD4Q8N4Q1 RNU6-461P-201ENST00000364195 107 ntBASIC3.17□□□□□ -1.9
CHCHD4Q8N4Q1 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.17□□□□□ -1.9
CHCHD4Q8N4Q1 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.17□□□□□ -1.9
CHCHD4Q8N4Q1 U3.20-201ENST00000390909 217 ntBASIC3.17□□□□□ -1.9
CHCHD4Q8N4Q1 RNU6-1242P-201ENST00000391052 103 ntBASIC3.17□□□□□ -1.9
CHCHD4Q8N4Q1 ANAPC10P1-201ENST00000395991 556 ntBASIC3.17□□□□□ -1.9
CHCHD4Q8N4Q1 AL512633.1-201ENST00000399931 655 ntBASIC3.17□□□□□ -1.9
CHCHD4Q8N4Q1 MIR1261-201ENST00000408659 82 ntBASIC3.17□□□□□ -1.9
CHCHD4Q8N4Q1 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.17□□□□□ -1.9
CHCHD4Q8N4Q1 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.17□□□□□ -1.9
CHCHD4Q8N4Q1 AL139281.1-201ENST00000422120 335 ntBASIC3.17□□□□□ -1.9
CHCHD4Q8N4Q1 MTND2P9-201ENST00000422293 931 ntBASIC3.17□□□□□ -1.9
CHCHD4Q8N4Q1 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.17□□□□□ -1.9
CHCHD4Q8N4Q1 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC3.17□□□□□ -1.9
CHCHD4Q8N4Q1 AC084290.1-201ENST00000434995 374 ntBASIC3.17□□□□□ -1.9
CHCHD4Q8N4Q1 AL606517.1-201ENST00000446914 387 ntBASIC3.17□□□□□ -1.9
CHCHD4Q8N4Q1 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC3.17□□□□□ -1.9
CHCHD4Q8N4Q1 USP9YP25-201ENST00000457708 443 ntBASIC3.17□□□□□ -1.9
CHCHD4Q8N4Q1 RN7SL432P-201ENST00000484057 298 ntBASIC3.17□□□□□ -1.9
CHCHD4Q8N4Q1 AC108729.1-201ENST00000487812 947 ntBASIC3.17□□□□□ -1.9
CHCHD4Q8N4Q1 AIG1P1-201ENST00000503376 148 ntBASIC3.17□□□□□ -1.9
CHCHD4Q8N4Q1 AC008885.1-201ENST00000514930 301 ntBASIC3.17□□□□□ -1.9
CHCHD4Q8N4Q1 RNA5SP356-201ENST00000515972 94 ntBASIC3.17□□□□□ -1.9
CHCHD4Q8N4Q1 RNU6-311P-201ENST00000516224 102 ntBASIC3.17□□□□□ -1.9
CHCHD4Q8N4Q1 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.17□□□□□ -1.9
CHCHD4Q8N4Q1 CYCSP2-201ENST00000558168 301 ntBASIC3.17□□□□□ -1.9
CHCHD4Q8N4Q1 AC005951.2-201ENST00000576282 495 ntBASIC3.17□□□□□ -1.9
CHCHD4Q8N4Q1 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.17□□□□□ -1.9
CHCHD4Q8N4Q1 AC097478.2-201ENST00000610572 514 ntBASIC3.17□□□□□ -1.9
CHCHD4Q8N4Q1 AC008498.1-201ENST00000613012 531 ntBASIC3.17□□□□□ -1.9
CHCHD4Q8N4Q1 AL078595.3-201ENST00000623815 1166 ntBASIC3.17□□□□□ -1.9
CHCHD4Q8N4Q1 MTND1P37-201ENST00000636562 264 ntBASIC3.17□□□□□ -1.9
CHCHD4Q8N4Q1 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
CHCHD4Q8N4Q1 AC092447.10-201ENST00000620607 1652 ntBASIC3.17□□□□□ -1.9
CHCHD4Q8N4Q1 AL161431.1-201ENST00000618966 4205 ntBASIC3.16□□□□□ -1.9
CHCHD4Q8N4Q1 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CHCHD4Q8N4Q1 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CHCHD4Q8N4Q1 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CHCHD4Q8N4Q1 OR5J1P-201ENST00000313544 939 ntBASIC3.16□□□□□ -1.9
CHCHD4Q8N4Q1 U3.6-201ENST00000363622 211 ntBASIC3.16□□□□□ -1.9
CHCHD4Q8N4Q1 RNU6-754P-201ENST00000391166 107 ntBASIC3.16□□□□□ -1.9
CHCHD4Q8N4Q1 AL356421.1-201ENST00000403255 413 ntBASIC3.16□□□□□ -1.9
CHCHD4Q8N4Q1 MIR1284-201ENST00000408337 120 ntBASIC3.16□□□□□ -1.9
CHCHD4Q8N4Q1 RNU6-516P-201ENST00000411381 104 ntBASIC3.16□□□□□ -1.9
CHCHD4Q8N4Q1 SSR1P2-201ENST00000415208 787 ntBASIC3.16□□□□□ -1.9
CHCHD4Q8N4Q1 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC3.16□□□□□ -1.9
CHCHD4Q8N4Q1 AC093151.1-201ENST00000427711 313 ntBASIC3.16□□□□□ -1.9
CHCHD4Q8N4Q1 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.16□□□□□ -1.9
CHCHD4Q8N4Q1 AC112653.1-201ENST00000443851 386 ntBASIC3.16□□□□□ -1.9
CHCHD4Q8N4Q1 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC3.16□□□□□ -1.9
CHCHD4Q8N4Q1 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CHCHD4Q8N4Q1 AC022447.3-201ENST00000506865 495 ntBASIC3.16□□□□□ -1.9
CHCHD4Q8N4Q1 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.16□□□□□ -1.9
CHCHD4Q8N4Q1 RNU6-150P-201ENST00000516237 95 ntBASIC3.16□□□□□ -1.9
CHCHD4Q8N4Q1 PSMA2P1-201ENST00000526365 646 ntBASIC3.16□□□□□ -1.9
CHCHD4Q8N4Q1 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC3.16□□□□□ -1.9
CHCHD4Q8N4Q1 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.16□□□□□ -1.9
CHCHD4Q8N4Q1 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.16□□□□□ -1.9
CHCHD4Q8N4Q1 AC138761.3-201ENST00000579993 334 ntBASIC3.16□□□□□ -1.9
CHCHD4Q8N4Q1 MIR3162-201ENST00000581818 82 ntBASIC3.16□□□□□ -1.9
CHCHD4Q8N4Q1 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.16□□□□□ -1.9
CHCHD4Q8N4Q1 AC002545.1-201ENST00000592511 181 ntBASIC3.16□□□□□ -1.9
CHCHD4Q8N4Q1 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.16□□□□□ -1.9
CHCHD4Q8N4Q1 AL450336.1-201ENST00000605180 586 ntBASIC3.16□□□□□ -1.9
CHCHD4Q8N4Q1 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.16□□□□□ -1.9
CHCHD4Q8N4Q1 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.16□□□□□ -1.9
CHCHD4Q8N4Q1 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC3.16□□□□□ -1.9
CHCHD4Q8N4Q1 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.16□□□□□ -1.9
CHCHD4Q8N4Q1 AC019226.1-201ENST00000625666 515 ntBASIC3.16□□□□□ -1.9
CHCHD4Q8N4Q1 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.16□□□□□ -1.9
CHCHD4Q8N4Q1 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.16□□□□□ -1.9
CHCHD4Q8N4Q1 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.16□□□□□ -1.9
CHCHD4Q8N4Q1 AC011477.1-204ENST00000623416 1325 ntBASIC3.16□□□□□ -1.9
CHCHD4Q8N4Q1 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.16□□□□□ -1.9
CHCHD4Q8N4Q1 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.15□□□□□ -1.9
CHCHD4Q8N4Q1 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.9
CHCHD4Q8N4Q1 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
CHCHD4Q8N4Q1 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.15□□□□□ -1.9
CHCHD4Q8N4Q1 RNU6-140P-201ENST00000384566 108 ntBASIC3.15□□□□□ -1.91
CHCHD4Q8N4Q1 AL445529.1-201ENST00000398713 389 ntBASIC3.15□□□□□ -1.91
CHCHD4Q8N4Q1 AL513331.1-201ENST00000411908 397 ntBASIC3.15□□□□□ -1.91
CHCHD4Q8N4Q1 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 121.3 ms