Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 AP005435.4-201ENST00000529514 284 ntBASIC4.08□□□□□ -1.76
SLC44A3Q8N4M1 AC024224.1-201ENST00000538284 609 ntBASIC4.08□□□□□ -1.76
SLC44A3Q8N4M1 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.08□□□□□ -1.76
SLC44A3Q8N4M1 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC4.08□□□□□ -1.76
SLC44A3Q8N4M1 PSMA3P-201ENST00000555485 635 ntBASIC4.08□□□□□ -1.76
SLC44A3Q8N4M1 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC4.08□□□□□ -1.76
SLC44A3Q8N4M1 NF1P5-201ENST00000588287 448 ntBASIC4.08□□□□□ -1.76
SLC44A3Q8N4M1 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.08□□□□□ -1.76
SLC44A3Q8N4M1 KC877982.1-201ENST00000602313 470 ntBASIC4.08□□□□□ -1.76
SLC44A3Q8N4M1 AL139395.1-201ENST00000603662 160 ntBASIC4.08□□□□□ -1.76
SLC44A3Q8N4M1 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.08□□□□□ -1.76
SLC44A3Q8N4M1 AL451044.1-201ENST00000604867 238 ntBASIC4.08□□□□□ -1.76
SLC44A3Q8N4M1 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC4.08□□□□□ -1.76
SLC44A3Q8N4M1 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC4.08□□□□□ -1.76
SLC44A3Q8N4M1 AL138721.1-201ENST00000616756 179 ntBASIC4.08□□□□□ -1.76
SLC44A3Q8N4M1 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.08□□□□□ -1.76
SLC44A3Q8N4M1 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC4.08□□□□□ -1.76
SLC44A3Q8N4M1 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
SLC44A3Q8N4M1 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SLC44A3Q8N4M1 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
SLC44A3Q8N4M1 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.08□□□□□ -1.76
SLC44A3Q8N4M1 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
SLC44A3Q8N4M1 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.07□□□□□ -1.76
SLC44A3Q8N4M1 AL138713.1-201ENST00000624026 2130 ntBASIC4.07□□□□□ -1.76
SLC44A3Q8N4M1 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SLC44A3Q8N4M1 MTCO1P12-201ENST00000414273 1543 ntBASIC4.07□□□□□ -1.76
SLC44A3Q8N4M1 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SLC44A3Q8N4M1 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SLC44A3Q8N4M1 OR1S2-201ENST00000302592 978 ntBASIC4.07□□□□□ -1.76
SLC44A3Q8N4M1 AL139276.1-201ENST00000311910 1001 ntBASIC4.07□□□□□ -1.76
SLC44A3Q8N4M1 RNA5SP52-201ENST00000362448 134 ntBASIC4.07□□□□□ -1.76
SLC44A3Q8N4M1 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC4.07□□□□□ -1.76
SLC44A3Q8N4M1 SNORA32.2-201ENST00000384049 122 ntBASIC4.07□□□□□ -1.76
SLC44A3Q8N4M1 SNORD3H-201ENST00000384486 214 ntBASIC4.07□□□□□ -1.76
SLC44A3Q8N4M1 UBE2Q2P12-201ENST00000414573 204 ntBASIC4.07□□□□□ -1.76
SLC44A3Q8N4M1 AC009161.1-201ENST00000417306 376 ntBASIC4.07□□□□□ -1.76
SLC44A3Q8N4M1 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.07□□□□□ -1.76
SLC44A3Q8N4M1 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SLC44A3Q8N4M1 AL353729.1-201ENST00000425044 720 ntBASIC4.07□□□□□ -1.76
SLC44A3Q8N4M1 DUTP6-201ENST00000425573 462 ntBASIC4.07□□□□□ -1.76
SLC44A3Q8N4M1 RPL23AP89-201ENST00000439324 255 ntBASIC4.07□□□□□ -1.76
SLC44A3Q8N4M1 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC4.07□□□□□ -1.76
SLC44A3Q8N4M1 MTND3P16-201ENST00000452205 344 ntBASIC4.07□□□□□ -1.76
SLC44A3Q8N4M1 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC4.07□□□□□ -1.76
SLC44A3Q8N4M1 AC106707.2-201ENST00000484182 374 ntBASIC4.07□□□□□ -1.76
SLC44A3Q8N4M1 AC114797.1-201ENST00000514003 728 ntBASIC4.07□□□□□ -1.76
SLC44A3Q8N4M1 Y_RNA.665-201ENST00000516177 98 ntBASIC4.07□□□□□ -1.76
SLC44A3Q8N4M1 RNA5SP154-201ENST00000516193 111 ntBASIC4.07□□□□□ -1.76
SLC44A3Q8N4M1 IGLV3-26-201ENST00000520756 302 ntBASIC4.07□□□□□ -1.76
SLC44A3Q8N4M1 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC4.07□□□□□ -1.76
SLC44A3Q8N4M1 SETP2-201ENST00000553886 926 ntBASIC4.07□□□□□ -1.76
SLC44A3Q8N4M1 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.07□□□□□ -1.76
SLC44A3Q8N4M1 MIR3922-201ENST00000585192 84 ntBASIC4.07□□□□□ -1.76
SLC44A3Q8N4M1 AL121992.2-201ENST00000606262 256 ntBASIC4.07□□□□□ -1.76
SLC44A3Q8N4M1 RNU6-89P-201ENST00000606519 100 ntBASIC4.07□□□□□ -1.76
SLC44A3Q8N4M1 U3.45-201ENST00000607547 219 ntBASIC4.07□□□□□ -1.76
SLC44A3Q8N4M1 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.07□□□□□ -1.76
SLC44A3Q8N4M1 AL603758.1-201ENST00000618654 241 ntBASIC4.07□□□□□ -1.76
SLC44A3Q8N4M1 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC4.07□□□□□ -1.76
SLC44A3Q8N4M1 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SLC44A3Q8N4M1 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
SLC44A3Q8N4M1 AL049555.1-201ENST00000562834 1933 ntBASIC4.07□□□□□ -1.76
SLC44A3Q8N4M1 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
SLC44A3Q8N4M1 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
SLC44A3Q8N4M1 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
SLC44A3Q8N4M1 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SLC44A3Q8N4M1 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.07□□□□□ -1.76
SLC44A3Q8N4M1 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SLC44A3Q8N4M1 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SLC44A3Q8N4M1 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.06□□□□□ -1.76
SLC44A3Q8N4M1 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
SLC44A3Q8N4M1 RNU5E-8P-201ENST00000363502 116 ntBASIC4.06□□□□□ -1.76
SLC44A3Q8N4M1 RNA5SP399-201ENST00000364003 117 ntBASIC4.06□□□□□ -1.76
SLC44A3Q8N4M1 SNORD82-201ENST00000365530 70 ntBASIC4.06□□□□□ -1.76
SLC44A3Q8N4M1 RNY3P13-201ENST00000365542 102 ntBASIC4.06□□□□□ -1.76
SLC44A3Q8N4M1 U1.1-201ENST00000384101 164 ntBASIC4.06□□□□□ -1.76
SLC44A3Q8N4M1 MIR558-201ENST00000384920 94 ntBASIC4.06□□□□□ -1.76
SLC44A3Q8N4M1 MIR454-201ENST00000390180 115 ntBASIC4.06□□□□□ -1.76
SLC44A3Q8N4M1 MIR708-201ENST00000390708 88 ntBASIC4.06□□□□□ -1.76
SLC44A3Q8N4M1 Y_RNA.615-201ENST00000410769 117 ntBASIC4.06□□□□□ -1.76
SLC44A3Q8N4M1 RNA5SP104-201ENST00000410989 118 ntBASIC4.06□□□□□ -1.76
SLC44A3Q8N4M1 NDUFB4P5-201ENST00000415445 361 ntBASIC4.06□□□□□ -1.76
SLC44A3Q8N4M1 AL591419.1-201ENST00000427423 339 ntBASIC4.06□□□□□ -1.76
SLC44A3Q8N4M1 AP000907.1-201ENST00000428428 510 ntBASIC4.06□□□□□ -1.76
SLC44A3Q8N4M1 OR4K11P-201ENST00000431829 904 ntBASIC4.06□□□□□ -1.76
SLC44A3Q8N4M1 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC4.06□□□□□ -1.76
SLC44A3Q8N4M1 NIPA2P5-201ENST00000452282 464 ntBASIC4.06□□□□□ -1.76
SLC44A3Q8N4M1 AC007967.1-201ENST00000455422 1159 ntBASIC4.06□□□□□ -1.76
SLC44A3Q8N4M1 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC4.06□□□□□ -1.76
SLC44A3Q8N4M1 AL133162.1-201ENST00000463228 453 ntBASIC4.06□□□□□ -1.76
SLC44A3Q8N4M1 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC4.06□□□□□ -1.76
SLC44A3Q8N4M1 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.06□□□□□ -1.76
SLC44A3Q8N4M1 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.06□□□□□ -1.76
SLC44A3Q8N4M1 AC104619.4-201ENST00000510773 249 ntBASIC4.06□□□□□ -1.76
SLC44A3Q8N4M1 VWA8P1-201ENST00000510889 176 ntBASIC4.06□□□□□ -1.76
SLC44A3Q8N4M1 RN7SKP219-201ENST00000516825 296 ntBASIC4.06□□□□□ -1.76
SLC44A3Q8N4M1 SCARNA14-201ENST00000516903 136 ntBASIC4.06□□□□□ -1.76
SLC44A3Q8N4M1 BNIP3P6-201ENST00000549284 499 ntBASIC4.06□□□□□ -1.76
SLC44A3Q8N4M1 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC4.06□□□□□ -1.76
SLC44A3Q8N4M1 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 826.4 ms