Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
SYNPOQ8N3V7 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC4.45□□□□□ -1.7
SYNPOQ8N3V7 RNA5SP513-201ENST00000364648 118 ntBASIC4.45□□□□□ -1.7
SYNPOQ8N3V7 Y_RNA.378-201ENST00000365652 113 ntBASIC4.45□□□□□ -1.7
SYNPOQ8N3V7 SNORD70.1-201ENST00000391007 85 ntBASIC4.45□□□□□ -1.7
SYNPOQ8N3V7 AL592114.1-201ENST00000403842 483 ntBASIC4.45□□□□□ -1.7
SYNPOQ8N3V7 AC009237.10-201ENST00000414112 510 ntBASIC4.45□□□□□ -1.7
SYNPOQ8N3V7 AL139095.3-201ENST00000419672 1203 ntBASIC4.45□□□□□ -1.7
SYNPOQ8N3V7 AC245054.1-201ENST00000420944 258 ntBASIC4.45□□□□□ -1.7
SYNPOQ8N3V7 Z74021.1-201ENST00000423610 407 ntBASIC4.45□□□□□ -1.7
SYNPOQ8N3V7 AL160275.3-201ENST00000423876 471 ntBASIC4.45□□□□□ -1.7
SYNPOQ8N3V7 ZNF863P-201ENST00000426746 417 ntBASIC4.45□□□□□ -1.7
SYNPOQ8N3V7 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC4.45□□□□□ -1.7
SYNPOQ8N3V7 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC4.45□□□□□ -1.7
SYNPOQ8N3V7 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC4.45□□□□□ -1.7
SYNPOQ8N3V7 KC877373.1-201ENST00000479066 408 ntBASIC4.45□□□□□ -1.7
SYNPOQ8N3V7 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.45□□□□□ -1.7
SYNPOQ8N3V7 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.45□□□□□ -1.7
SYNPOQ8N3V7 AC091885.1-201ENST00000506658 268 ntBASIC4.45□□□□□ -1.7
SYNPOQ8N3V7 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC4.45□□□□□ -1.7
SYNPOQ8N3V7 RNU6-875P-201ENST00000516488 106 ntBASIC4.45□□□□□ -1.7
SYNPOQ8N3V7 SNORA67.7-201ENST00000516664 135 ntBASIC4.45□□□□□ -1.7
SYNPOQ8N3V7 RNU6-914P-201ENST00000516749 109 ntBASIC4.45□□□□□ -1.7
SYNPOQ8N3V7 RNA5SP290-201ENST00000517133 127 ntBASIC4.45□□□□□ -1.7
SYNPOQ8N3V7 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC4.45□□□□□ -1.7
SYNPOQ8N3V7 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC4.45□□□□□ -1.7
SYNPOQ8N3V7 TVP23BP1-201ENST00000557500 617 ntBASIC4.45□□□□□ -1.7
SYNPOQ8N3V7 AC107294.1-201ENST00000609524 467 ntBASIC4.45□□□□□ -1.7
SYNPOQ8N3V7 AL136221.1-201ENST00000621449 509 ntBASIC4.45□□□□□ -1.7
SYNPOQ8N3V7 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SYNPOQ8N3V7 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.45□□□□□ -1.7
SYNPOQ8N3V7 AL133243.3-201ENST00000617415 3004 ntBASIC4.45□□□□□ -1.7
SYNPOQ8N3V7 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.45□□□□□ -1.7
SYNPOQ8N3V7 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.45□□□□□ -1.7
SYNPOQ8N3V7 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC4.45□□□□□ -1.7
SYNPOQ8N3V7 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
SYNPOQ8N3V7 EOGT-210ENST00000615922 1931 ntBASIC4.44□□□□□ -1.7
SYNPOQ8N3V7 MARK2P15-201ENST00000432204 2186 ntBASIC4.44□□□□□ -1.7
SYNPOQ8N3V7 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SYNPOQ8N3V7 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.44□□□□□ -1.7
SYNPOQ8N3V7 Y_RNA.279-201ENST00000364763 95 ntBASIC4.44□□□□□ -1.7
SYNPOQ8N3V7 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SYNPOQ8N3V7 MIR554-201ENST00000384874 96 ntBASIC4.44□□□□□ -1.7
SYNPOQ8N3V7 MIR325-201ENST00000385260 98 ntBASIC4.44□□□□□ -1.7
SYNPOQ8N3V7 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SYNPOQ8N3V7 AC108032.1-201ENST00000416706 207 ntBASIC4.44□□□□□ -1.7
SYNPOQ8N3V7 NDUFB4P7-201ENST00000423198 363 ntBASIC4.44□□□□□ -1.7
SYNPOQ8N3V7 SRIP2-201ENST00000428470 166 ntBASIC4.44□□□□□ -1.7
SYNPOQ8N3V7 AL117339.2-201ENST00000430475 180 ntBASIC4.44□□□□□ -1.7
SYNPOQ8N3V7 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC4.44□□□□□ -1.7
SYNPOQ8N3V7 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC4.44□□□□□ -1.7
SYNPOQ8N3V7 AC092573.2-201ENST00000434546 243 ntBASIC4.44□□□□□ -1.7
SYNPOQ8N3V7 HSPD1P21-201ENST00000436541 245 ntBASIC4.44□□□□□ -1.7
SYNPOQ8N3V7 RPL23AP52-201ENST00000439311 478 ntBASIC4.44□□□□□ -1.7
SYNPOQ8N3V7 AC093019.1-201ENST00000443135 252 ntBASIC4.44□□□□□ -1.7
SYNPOQ8N3V7 TRAPPC2P3-201ENST00000443200 321 ntBASIC4.44□□□□□ -1.7
SYNPOQ8N3V7 IGKV1OR-3-201ENST00000446944 348 ntBASIC4.44□□□□□ -1.7
SYNPOQ8N3V7 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC4.44□□□□□ -1.7
SYNPOQ8N3V7 HMGN2P26-201ENST00000463169 339 ntBASIC4.44□□□□□ -1.7
SYNPOQ8N3V7 RPS23P3-201ENST00000470993 430 ntBASIC4.44□□□□□ -1.7
SYNPOQ8N3V7 RN7SL132P-201ENST00000478131 296 ntBASIC4.44□□□□□ -1.7
SYNPOQ8N3V7 RPS4XP13-201ENST00000483219 789 ntBASIC4.44□□□□□ -1.7
SYNPOQ8N3V7 AC083904.1-201ENST00000487828 231 ntBASIC4.44□□□□□ -1.7
SYNPOQ8N3V7 AC021146.3-201ENST00000511911 260 ntBASIC4.44□□□□□ -1.7
SYNPOQ8N3V7 TBCAP3-201ENST00000512475 312 ntBASIC4.44□□□□□ -1.7
SYNPOQ8N3V7 RNA5SP49-201ENST00000516450 115 ntBASIC4.44□□□□□ -1.7
SYNPOQ8N3V7 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.44□□□□□ -1.7
SYNPOQ8N3V7 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.44□□□□□ -1.7
SYNPOQ8N3V7 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.44□□□□□ -1.7
SYNPOQ8N3V7 AC013553.2-201ENST00000604244 589 ntBASIC4.44□□□□□ -1.7
SYNPOQ8N3V7 AC092807.2-201ENST00000609367 243 ntBASIC4.44□□□□□ -1.7
SYNPOQ8N3V7 DUSP12P1-201ENST00000612874 516 ntBASIC4.44□□□□□ -1.7
SYNPOQ8N3V7 AC090132.2-201ENST00000615881 347 ntBASIC4.44□□□□□ -1.7
SYNPOQ8N3V7 AC006133.1-201ENST00000617106 264 ntBASIC4.44□□□□□ -1.7
SYNPOQ8N3V7 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
SYNPOQ8N3V7 AL161912.2-201ENST00000565707 3007 ntBASIC4.44□□□□□ -1.7
SYNPOQ8N3V7 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.44□□□□□ -1.7
SYNPOQ8N3V7 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SYNPOQ8N3V7 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SYNPOQ8N3V7 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
SYNPOQ8N3V7 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SYNPOQ8N3V7 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.44□□□□□ -1.7
SYNPOQ8N3V7 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
SYNPOQ8N3V7 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.43□□□□□ -1.7
SYNPOQ8N3V7 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SYNPOQ8N3V7 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.43□□□□□ -1.7
SYNPOQ8N3V7 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.43□□□□□ -1.7
SYNPOQ8N3V7 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
SYNPOQ8N3V7 RNU1-20P-201ENST00000363314 162 ntBASIC4.43□□□□□ -1.7
SYNPOQ8N3V7 Y_RNA.245-201ENST00000364493 95 ntBASIC4.43□□□□□ -1.7
SYNPOQ8N3V7 RNU6-715P-201ENST00000365204 103 ntBASIC4.43□□□□□ -1.7
SYNPOQ8N3V7 RNA5SP283-201ENST00000365604 119 ntBASIC4.43□□□□□ -1.7
SYNPOQ8N3V7 MIR514A2-201ENST00000385131 88 ntBASIC4.43□□□□□ -1.7
SYNPOQ8N3V7 MIR514A3-201ENST00000385132 88 ntBASIC4.43□□□□□ -1.7
SYNPOQ8N3V7 AL590704.1-201ENST00000402856 794 ntBASIC4.43□□□□□ -1.7
SYNPOQ8N3V7 AL139397.2-201ENST00000404529 772 ntBASIC4.43□□□□□ -1.7
SYNPOQ8N3V7 RPS4XP7-201ENST00000406274 780 ntBASIC4.43□□□□□ -1.7
SYNPOQ8N3V7 ARL5AP1-201ENST00000418991 388 ntBASIC4.43□□□□□ -1.7
SYNPOQ8N3V7 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC4.43□□□□□ -1.7
SYNPOQ8N3V7 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms