Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 Y_RNA.97-201ENST00000363094 102 ntBASIC2.89□□□□□ -1.95
CCDC71Q8IV32 RNU6-173P-201ENST00000364215 104 ntBASIC2.89□□□□□ -1.95
CCDC71Q8IV32 RNU6-1078P-201ENST00000364522 103 ntBASIC2.89□□□□□ -1.95
CCDC71Q8IV32 RNU1-101P-201ENST00000391171 127 ntBASIC2.89□□□□□ -1.95
CCDC71Q8IV32 RNA5SP344-201ENST00000411081 104 ntBASIC2.89□□□□□ -1.95
CCDC71Q8IV32 AL359704.1-201ENST00000411586 781 ntBASIC2.89□□□□□ -1.95
CCDC71Q8IV32 TPMTP3-201ENST00000411928 735 ntBASIC2.89□□□□□ -1.95
CCDC71Q8IV32 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.89□□□□□ -1.95
CCDC71Q8IV32 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC2.89□□□□□ -1.95
CCDC71Q8IV32 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC2.89□□□□□ -1.95
CCDC71Q8IV32 RAC1P7-201ENST00000445367 377 ntBASIC2.89□□□□□ -1.95
CCDC71Q8IV32 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.89□□□□□ -1.95
CCDC71Q8IV32 NANOGNBP1-201ENST00000448444 480 ntBASIC2.89□□□□□ -1.95
CCDC71Q8IV32 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC2.89□□□□□ -1.95
CCDC71Q8IV32 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.89□□□□□ -1.95
CCDC71Q8IV32 AP1S2P1-201ENST00000457344 379 ntBASIC2.89□□□□□ -1.95
CCDC71Q8IV32 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.89□□□□□ -1.95
CCDC71Q8IV32 AC096576.1-201ENST00000489014 359 ntBASIC2.89□□□□□ -1.95
CCDC71Q8IV32 AC080014.1-201ENST00000496877 1201 ntBASIC2.89□□□□□ -1.95
CCDC71Q8IV32 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.89□□□□□ -1.95
CCDC71Q8IV32 RPL23AP94-201ENST00000512518 302 ntBASIC2.89□□□□□ -1.95
CCDC71Q8IV32 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC2.89□□□□□ -1.95
CCDC71Q8IV32 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC2.89□□□□□ -1.95
CCDC71Q8IV32 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.89□□□□□ -1.95
CCDC71Q8IV32 AL157394.1-201ENST00000562983 1224 ntBASIC2.89□□□□□ -1.95
CCDC71Q8IV32 AC091489.2-201ENST00000566263 604 ntBASIC2.89□□□□□ -1.95
CCDC71Q8IV32 MIR2682-201ENST00000580305 110 ntBASIC2.89□□□□□ -1.95
CCDC71Q8IV32 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.89□□□□□ -1.95
CCDC71Q8IV32 Z99497.2-201ENST00000603634 310 ntBASIC2.89□□□□□ -1.95
CCDC71Q8IV32 PRELID3BP8-201ENST00000604148 295 ntBASIC2.89□□□□□ -1.95
CCDC71Q8IV32 AC121247.2-201ENST00000604776 136 ntBASIC2.89□□□□□ -1.95
CCDC71Q8IV32 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC2.89□□□□□ -1.95
CCDC71Q8IV32 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.89□□□□□ -1.95
CCDC71Q8IV32 AC008443.7-201ENST00000622195 246 ntBASIC2.89□□□□□ -1.95
CCDC71Q8IV32 AC068057.2-201ENST00000624047 895 ntBASIC2.89□□□□□ -1.95
CCDC71Q8IV32 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.89□□□□□ -1.95
CCDC71Q8IV32 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.89□□□□□ -1.95
CCDC71Q8IV32 AC009812.4-201ENST00000569134 1805 ntBASIC2.89□□□□□ -1.95
CCDC71Q8IV32 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.88□□□□□ -1.95
CCDC71Q8IV32 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC2.88□□□□□ -1.95
CCDC71Q8IV32 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CCDC71Q8IV32 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CCDC71Q8IV32 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CCDC71Q8IV32 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
CCDC71Q8IV32 RNU6-50P-201ENST00000362356 103 ntBASIC2.88□□□□□ -1.95
CCDC71Q8IV32 RNU6-114P-201ENST00000384704 105 ntBASIC2.88□□□□□ -1.95
CCDC71Q8IV32 RNA5SP129-201ENST00000410276 118 ntBASIC2.88□□□□□ -1.95
CCDC71Q8IV32 BMS1P22-201ENST00000414726 313 ntBASIC2.88□□□□□ -1.95
CCDC71Q8IV32 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC2.88□□□□□ -1.95
CCDC71Q8IV32 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC2.88□□□□□ -1.95
CCDC71Q8IV32 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.88□□□□□ -1.95
CCDC71Q8IV32 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.88□□□□□ -1.95
CCDC71Q8IV32 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC2.88□□□□□ -1.95
CCDC71Q8IV32 MED14P1-201ENST00000430517 648 ntBASIC2.88□□□□□ -1.95
CCDC71Q8IV32 AC236972.1-201ENST00000433225 199 ntBASIC2.88□□□□□ -1.95
CCDC71Q8IV32 AC025750.2-201ENST00000442609 450 ntBASIC2.88□□□□□ -1.95
CCDC71Q8IV32 BMI1P1-201ENST00000445879 941 ntBASIC2.88□□□□□ -1.95
CCDC71Q8IV32 GAPDHP27-201ENST00000447427 1020 ntBASIC2.88□□□□□ -1.95
CCDC71Q8IV32 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.88□□□□□ -1.95
CCDC71Q8IV32 ZNF114P1-201ENST00000453500 292 ntBASIC2.88□□□□□ -1.95
CCDC71Q8IV32 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC2.88□□□□□ -1.95
CCDC71Q8IV32 UBE2DNL-203ENST00000474922 222 ntBASIC2.88□□□□□ -1.95
CCDC71Q8IV32 HMGN2P13-201ENST00000476476 274 ntBASIC2.88□□□□□ -1.95
CCDC71Q8IV32 AC109486.1-201ENST00000486833 374 ntBASIC2.88□□□□□ -1.95
CCDC71Q8IV32 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC2.88□□□□□ -1.95
CCDC71Q8IV32 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.88□□□□□ -1.95
CCDC71Q8IV32 ARL4AP2-201ENST00000507378 601 ntBASIC2.88□□□□□ -1.95
CCDC71Q8IV32 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC2.88□□□□□ -1.95
CCDC71Q8IV32 AC010486.3-201ENST00000511602 785 ntBASIC2.88□□□□□ -1.95
CCDC71Q8IV32 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.88□□□□□ -1.95
CCDC71Q8IV32 RN7SKP43-201ENST00000516173 320 ntBASIC2.88□□□□□ -1.95
CCDC71Q8IV32 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.88□□□□□ -1.95
CCDC71Q8IV32 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.88□□□□□ -1.95
CCDC71Q8IV32 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC2.88□□□□□ -1.95
CCDC71Q8IV32 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.88□□□□□ -1.95
CCDC71Q8IV32 UBE2L4-201ENST00000587688 464 ntBASIC2.88□□□□□ -1.95
CCDC71Q8IV32 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.88□□□□□ -1.95
CCDC71Q8IV32 AP001330.4-201ENST00000604350 154 ntBASIC2.88□□□□□ -1.95
CCDC71Q8IV32 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC2.88□□□□□ -1.95
CCDC71Q8IV32 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC2.88□□□□□ -1.95
CCDC71Q8IV32 AC100793.4-201ENST00000613683 429 ntBASIC2.88□□□□□ -1.95
CCDC71Q8IV32 AL157817.1-201ENST00000614264 790 ntBASIC2.88□□□□□ -1.95
CCDC71Q8IV32 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.88□□□□□ -1.95
CCDC71Q8IV32 AC009268.2-201ENST00000621925 457 ntBASIC2.88□□□□□ -1.95
CCDC71Q8IV32 AL158801.5-201ENST00000623123 465 ntBASIC2.88□□□□□ -1.95
CCDC71Q8IV32 AC007494.3-201ENST00000624660 743 ntBASIC2.88□□□□□ -1.95
CCDC71Q8IV32 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.88□□□□□ -1.95
CCDC71Q8IV32 AC084035.1-201ENST00000634543 607 ntBASIC2.88□□□□□ -1.95
CCDC71Q8IV32 MIR3974-201ENST00000637126 96 ntBASIC2.88□□□□□ -1.95
CCDC71Q8IV32 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
CCDC71Q8IV32 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
CCDC71Q8IV32 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CCDC71Q8IV32 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CCDC71Q8IV32 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
CCDC71Q8IV32 AC103988.1-201ENST00000566382 2177 ntBASIC2.87□□□□□ -1.95
CCDC71Q8IV32 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CCDC71Q8IV32 SNORA51.4-201ENST00000364993 124 ntBASIC2.87□□□□□ -1.95
CCDC71Q8IV32 RNU6-637P-201ENST00000384050 107 ntBASIC2.87□□□□□ -1.95
CCDC71Q8IV32 Y_RNA.500-201ENST00000384466 111 ntBASIC2.87□□□□□ -1.95
CCDC71Q8IV32 U8.14-201ENST00000390843 143 ntBASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms