Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 ATP5C1P1-201ENST00000441945 895 ntBASIC3.27□□□□□ -1.89
LDB1Q86U70 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.27□□□□□ -1.89
LDB1Q86U70 SSXP1-201ENST00000453640 473 ntBASIC3.27□□□□□ -1.89
LDB1Q86U70 AL359385.1-201ENST00000456509 365 ntBASIC3.27□□□□□ -1.89
LDB1Q86U70 SNORD42A-201ENST00000459584 64 ntBASIC3.27□□□□□ -1.89
LDB1Q86U70 RN7SL442P-201ENST00000473804 320 ntBASIC3.27□□□□□ -1.89
LDB1Q86U70 AC010631.1-201ENST00000474150 156 ntBASIC3.27□□□□□ -1.89
LDB1Q86U70 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC3.27□□□□□ -1.89
LDB1Q86U70 RPL21P13-201ENST00000488305 481 ntBASIC3.27□□□□□ -1.89
LDB1Q86U70 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.27□□□□□ -1.89
LDB1Q86U70 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.27□□□□□ -1.89
LDB1Q86U70 AC022690.1-201ENST00000526681 550 ntBASIC3.27□□□□□ -1.89
LDB1Q86U70 AP003181.2-201ENST00000528941 181 ntBASIC3.27□□□□□ -1.89
LDB1Q86U70 AC007115.1-201ENST00000546853 234 ntBASIC3.27□□□□□ -1.89
LDB1Q86U70 AC093012.1-202ENST00000549403 582 ntBASIC3.27□□□□□ -1.89
LDB1Q86U70 AC124947.2-202ENST00000552735 133 ntBASIC3.27□□□□□ -1.89
LDB1Q86U70 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.27□□□□□ -1.89
LDB1Q86U70 AP005136.1-201ENST00000579765 429 ntBASIC3.27□□□□□ -1.89
LDB1Q86U70 MIR4293-201ENST00000584305 78 ntBASIC3.27□□□□□ -1.89
LDB1Q86U70 HMGN1P30-201ENST00000589286 268 ntBASIC3.27□□□□□ -1.89
LDB1Q86U70 BNIP3P33-201ENST00000598912 569 ntBASIC3.27□□□□□ -1.89
LDB1Q86U70 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.27□□□□□ -1.89
LDB1Q86U70 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.27□□□□□ -1.89
LDB1Q86U70 AC090132.2-201ENST00000615881 347 ntBASIC3.27□□□□□ -1.89
LDB1Q86U70 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.27□□□□□ -1.89
LDB1Q86U70 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.27□□□□□ -1.89
LDB1Q86U70 AL136164.4-201ENST00000625013 2135 ntBASIC3.27□□□□□ -1.89
LDB1Q86U70 MIR7153-201ENST00000637758 57 ntBASIC3.27□□□□□ -1.89
LDB1Q86U70 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
LDB1Q86U70 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
LDB1Q86U70 AC021755.1-201ENST00000559747 1447 ntBASIC3.27□□□□□ -1.89
LDB1Q86U70 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
LDB1Q86U70 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
LDB1Q86U70 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
LDB1Q86U70 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.26□□□□□ -1.89
LDB1Q86U70 MTCO1P12-201ENST00000414273 1543 ntBASIC3.26□□□□□ -1.89
LDB1Q86U70 AC004972.1-201ENST00000623934 2209 ntBASIC3.26□□□□□ -1.89
LDB1Q86U70 RNU1-75P-201ENST00000347264 129 ntBASIC3.26□□□□□ -1.89
LDB1Q86U70 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
LDB1Q86U70 RNU6-1284P-201ENST00000363701 100 ntBASIC3.26□□□□□ -1.89
LDB1Q86U70 RNU6-1197P-201ENST00000391183 107 ntBASIC3.26□□□□□ -1.89
LDB1Q86U70 FAT1P1-201ENST00000406588 507 ntBASIC3.26□□□□□ -1.89
LDB1Q86U70 RNA5SP44-201ENST00000410446 133 ntBASIC3.26□□□□□ -1.89
LDB1Q86U70 RN7SKP140-201ENST00000411196 284 ntBASIC3.26□□□□□ -1.89
LDB1Q86U70 RPS3AP3-201ENST00000411933 242 ntBASIC3.26□□□□□ -1.89
LDB1Q86U70 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.26□□□□□ -1.89
LDB1Q86U70 AL365338.1-201ENST00000422282 858 ntBASIC3.26□□□□□ -1.89
LDB1Q86U70 AC019097.1-201ENST00000424783 735 ntBASIC3.26□□□□□ -1.89
LDB1Q86U70 AL159987.2-201ENST00000432754 307 ntBASIC3.26□□□□□ -1.89
LDB1Q86U70 MTCO2P16-201ENST00000436962 677 ntBASIC3.26□□□□□ -1.89
LDB1Q86U70 CST9LP2-201ENST00000437612 320 ntBASIC3.26□□□□□ -1.89
LDB1Q86U70 AC016696.1-201ENST00000446949 318 ntBASIC3.26□□□□□ -1.89
LDB1Q86U70 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
LDB1Q86U70 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC3.26□□□□□ -1.89
LDB1Q86U70 AC006539.3-201ENST00000454258 129 ntBASIC3.26□□□□□ -1.89
LDB1Q86U70 MTND1P12-201ENST00000455231 147 ntBASIC3.26□□□□□ -1.89
LDB1Q86U70 RNA5SP310-201ENST00000459084 116 ntBASIC3.26□□□□□ -1.89
LDB1Q86U70 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC3.26□□□□□ -1.89
LDB1Q86U70 LARP1BP2-201ENST00000486594 519 ntBASIC3.26□□□□□ -1.89
LDB1Q86U70 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC3.26□□□□□ -1.89
LDB1Q86U70 AC114797.1-201ENST00000514003 728 ntBASIC3.26□□□□□ -1.89
LDB1Q86U70 SCARNA20.6-201ENST00000517251 106 ntBASIC3.26□□□□□ -1.89
LDB1Q86U70 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.26□□□□□ -1.89
LDB1Q86U70 AP000873.5-201ENST00000533906 236 ntBASIC3.26□□□□□ -1.89
LDB1Q86U70 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.26□□□□□ -1.89
LDB1Q86U70 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.26□□□□□ -1.89
LDB1Q86U70 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC3.26□□□□□ -1.89
LDB1Q86U70 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC3.26□□□□□ -1.89
LDB1Q86U70 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.26□□□□□ -1.89
LDB1Q86U70 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC3.26□□□□□ -1.89
LDB1Q86U70 RPL21P12-201ENST00000559810 515 ntBASIC3.26□□□□□ -1.89
LDB1Q86U70 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.26□□□□□ -1.89
LDB1Q86U70 AC087752.4-201ENST00000605911 462 ntBASIC3.26□□□□□ -1.89
LDB1Q86U70 AC008250.2-201ENST00000615261 205 ntBASIC3.26□□□□□ -1.89
LDB1Q86U70 AC009090.3-201ENST00000616553 565 ntBASIC3.26□□□□□ -1.89
LDB1Q86U70 AC002076.2-201ENST00000617362 122 ntBASIC3.26□□□□□ -1.89
LDB1Q86U70 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.26□□□□□ -1.89
LDB1Q86U70 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.26□□□□□ -1.89
LDB1Q86U70 SNORA50A-202ENST00000629536 136 ntBASIC3.26□□□□□ -1.89
LDB1Q86U70 ZNF826P-207ENST00000622273 1910 ntBASIC3.26□□□□□ -1.89
LDB1Q86U70 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
LDB1Q86U70 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
LDB1Q86U70 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.25□□□□□ -1.89
LDB1Q86U70 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
LDB1Q86U70 RPL7P26-201ENST00000333817 754 ntBASIC3.25□□□□□ -1.89
LDB1Q86U70 AL359634.1-202ENST00000404721 284 ntBASIC3.25□□□□□ -1.89
LDB1Q86U70 RNU2-8P-201ENST00000410727 190 ntBASIC3.25□□□□□ -1.89
LDB1Q86U70 RNA5SP229-201ENST00000410809 99 ntBASIC3.25□□□□□ -1.89
LDB1Q86U70 MTND6P13-201ENST00000443510 523 ntBASIC3.25□□□□□ -1.89
LDB1Q86U70 AC009237.8-201ENST00000445492 379 ntBASIC3.25□□□□□ -1.89
LDB1Q86U70 AL360221.1-201ENST00000445989 335 ntBASIC3.25□□□□□ -1.89
LDB1Q86U70 AP000936.2-201ENST00000447151 681 ntBASIC3.25□□□□□ -1.89
LDB1Q86U70 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.25□□□□□ -1.89
LDB1Q86U70 RNU6-956P-201ENST00000458868 103 ntBASIC3.25□□□□□ -1.89
LDB1Q86U70 MTND1P3-201ENST00000484956 952 ntBASIC3.25□□□□□ -1.89
LDB1Q86U70 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.25□□□□□ -1.89
LDB1Q86U70 Y_RNA.672-201ENST00000516289 104 ntBASIC3.25□□□□□ -1.89
LDB1Q86U70 RNU6-1256P-201ENST00000516539 103 ntBASIC3.25□□□□□ -1.89
LDB1Q86U70 NRON-201ENST00000517270 370 ntBASIC3.25□□□□□ -1.89
LDB1Q86U70 AC104027.1-201ENST00000521887 300 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 125.1 ms