Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
CSMD3Q7Z407 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC0.93□□□□□ -2.26
CSMD3Q7Z407 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC0.93□□□□□ -2.26
CSMD3Q7Z407 EZH2P1-201ENST00000431167 291 ntBASIC0.93□□□□□ -2.26
CSMD3Q7Z407 AL078601.1-201ENST00000444542 271 ntBASIC0.93□□□□□ -2.26
CSMD3Q7Z407 RNU6-1132P-201ENST00000459214 107 ntBASIC0.93□□□□□ -2.26
CSMD3Q7Z407 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC0.93□□□□□ -2.26
CSMD3Q7Z407 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC0.93□□□□□ -2.26
CSMD3Q7Z407 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC0.93□□□□□ -2.26
CSMD3Q7Z407 uc_338.20-201ENST00000621563 178 ntBASIC0.93□□□□□ -2.26
CSMD3Q7Z407 AC022513.1-201ENST00000624512 117 ntBASIC0.93□□□□□ -2.26
CSMD3Q7Z407 AC011477.1-204ENST00000623416 1325 ntBASIC0.93□□□□□ -2.26
CSMD3Q7Z407 MT-TP-201ENST00000387461 68 ntBASIC0.93□□□□□ -2.26
CSMD3Q7Z407 MIR1250-201ENST00000408098 113 ntBASIC0.93□□□□□ -2.26
CSMD3Q7Z407 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC0.93□□□□□ -2.26
CSMD3Q7Z407 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC0.93□□□□□ -2.26
CSMD3Q7Z407 AL121871.1-201ENST00000443413 436 ntBASIC0.93□□□□□ -2.26
CSMD3Q7Z407 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC0.93□□□□□ -2.26
CSMD3Q7Z407 AC108059.3-201ENST00000456388 214 ntBASIC0.93□□□□□ -2.26
CSMD3Q7Z407 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC0.93□□□□□ -2.26
CSMD3Q7Z407 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC0.93□□□□□ -2.26
CSMD3Q7Z407 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC0.93□□□□□ -2.26
CSMD3Q7Z407 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC0.93□□□□□ -2.26
CSMD3Q7Z407 RNA5SP337-201ENST00000517007 109 ntBASIC0.93□□□□□ -2.26
CSMD3Q7Z407 AC090616.5-202ENST00000582111 297 ntBASIC0.93□□□□□ -2.26
CSMD3Q7Z407 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
CSMD3Q7Z407 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC0.93□□□□□ -2.26
CSMD3Q7Z407 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC0.93□□□□□ -2.26
CSMD3Q7Z407 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC0.93□□□□□ -2.26
CSMD3Q7Z407 RNU6-113P-201ENST00000516653 101 ntBASIC0.93□□□□□ -2.26
CSMD3Q7Z407 SULT1C2P1-202ENST00000562418 459 ntBASIC0.93□□□□□ -2.26
CSMD3Q7Z407 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC0.93□□□□□ -2.26
CSMD3Q7Z407 AC096656.1-201ENST00000623826 1364 ntBASIC0.93□□□□□ -2.26
CSMD3Q7Z407 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC0.92□□□□□ -2.26
CSMD3Q7Z407 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC0.92□□□□□ -2.26
CSMD3Q7Z407 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC0.92□□□□□ -2.26
CSMD3Q7Z407 AC241520.1-201ENST00000422654 1099 ntBASIC0.92□□□□□ -2.26
CSMD3Q7Z407 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC0.92□□□□□ -2.26
CSMD3Q7Z407 FABP5P3-201ENST00000437960 408 ntBASIC0.92□□□□□ -2.26
CSMD3Q7Z407 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC0.92□□□□□ -2.26
CSMD3Q7Z407 ARL5AP2-201ENST00000444698 533 ntBASIC0.92□□□□□ -2.26
CSMD3Q7Z407 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC0.92□□□□□ -2.26
CSMD3Q7Z407 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC0.92□□□□□ -2.26
CSMD3Q7Z407 OSBPL9P3-201ENST00000534523 595 ntBASIC0.92□□□□□ -2.26
CSMD3Q7Z407 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC0.92□□□□□ -2.26
CSMD3Q7Z407 CENPUP2-201ENST00000555897 1186 ntBASIC0.92□□□□□ -2.26
CSMD3Q7Z407 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC0.92□□□□□ -2.26
CSMD3Q7Z407 HSPE1P11-201ENST00000339579 310 ntBASIC0.92□□□□□ -2.26
CSMD3Q7Z407 RNU6-317P-201ENST00000384031 107 ntBASIC0.92□□□□□ -2.26
CSMD3Q7Z407 AC008850.1-201ENST00000427546 362 ntBASIC0.92□□□□□ -2.26
CSMD3Q7Z407 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
CSMD3Q7Z407 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
CSMD3Q7Z407 AL035407.2-201ENST00000454090 378 ntBASIC0.92□□□□□ -2.26
CSMD3Q7Z407 SEM1P1-201ENST00000506694 209 ntBASIC0.92□□□□□ -2.26
CSMD3Q7Z407 RNA5SP384-201ENST00000516615 116 ntBASIC0.92□□□□□ -2.26
CSMD3Q7Z407 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
CSMD3Q7Z407 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC0.92□□□□□ -2.26
CSMD3Q7Z407 MIR3973-201ENST00000579824 107 ntBASIC0.92□□□□□ -2.26
CSMD3Q7Z407 MIR3935-201ENST00000583472 104 ntBASIC0.92□□□□□ -2.26
CSMD3Q7Z407 VN1R81P-201ENST00000602085 372 ntBASIC0.92□□□□□ -2.26
CSMD3Q7Z407 AC103810.8-201ENST00000607347 118 ntBASIC0.92□□□□□ -2.26
CSMD3Q7Z407 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
CSMD3Q7Z407 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC0.92□□□□□ -2.26
CSMD3Q7Z407 AP001350.1-201ENST00000601906 1524 ntBASIC0.92□□□□□ -2.26
CSMD3Q7Z407 MTCYBP29-201ENST00000436327 1006 ntBASIC0.92□□□□□ -2.26
CSMD3Q7Z407 DUXAP8-207ENST00000456786 622 ntBASIC0.92□□□□□ -2.26
CSMD3Q7Z407 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC0.92□□□□□ -2.26
CSMD3Q7Z407 RPPH1-2P-201ENST00000516688 293 ntBASIC0.92□□□□□ -2.26
CSMD3Q7Z407 RNU1-104P-201ENST00000517280 175 ntBASIC0.92□□□□□ -2.26
CSMD3Q7Z407 CR383656.8-201ENST00000549046 145 ntBASIC0.92□□□□□ -2.26
CSMD3Q7Z407 AL627230.5-201ENST00000619807 58 ntBASIC0.92□□□□□ -2.26
CSMD3Q7Z407 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
CSMD3Q7Z407 ZNF33BP1-201ENST00000452497 1834 ntBASIC0.92□□□□□ -2.26
CSMD3Q7Z407 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC0.91□□□□□ -2.26
CSMD3Q7Z407 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
CSMD3Q7Z407 MIR758-201ENST00000390227 88 ntBASIC0.91□□□□□ -2.26
CSMD3Q7Z407 CYCSP48-201ENST00000417124 323 ntBASIC0.91□□□□□ -2.26
CSMD3Q7Z407 AL139109.1-201ENST00000455491 297 ntBASIC0.91□□□□□ -2.26
CSMD3Q7Z407 MTCO2P32-201ENST00000514865 403 ntBASIC0.91□□□□□ -2.26
CSMD3Q7Z407 AC025755.1-201ENST00000521306 278 ntBASIC0.91□□□□□ -2.26
CSMD3Q7Z407 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC0.91□□□□□ -2.26
CSMD3Q7Z407 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC0.91□□□□□ -2.26
CSMD3Q7Z407 AC007375.1-201ENST00000554513 578 ntBASIC0.91□□□□□ -2.26
CSMD3Q7Z407 AL390240.1-201ENST00000612950 384 ntBASIC0.91□□□□□ -2.26
CSMD3Q7Z407 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC0.91□□□□□ -2.26
CSMD3Q7Z407 PABPC1P9-201ENST00000426076 1612 ntBASIC0.91□□□□□ -2.26
CSMD3Q7Z407 PCF11-AS1-201ENST00000602322 1516 ntBASIC0.91□□□□□ -2.26
CSMD3Q7Z407 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
CSMD3Q7Z407 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC0.91□□□□□ -2.26
CSMD3Q7Z407 AC111188.2-201ENST00000529697 1387 ntBASIC0.91□□□□□ -2.26
CSMD3Q7Z407 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC0.91□□□□□ -2.26
CSMD3Q7Z407 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC0.91□□□□□ -2.26
CSMD3Q7Z407 Z96811.1-201ENST00000445880 108 ntBASIC0.91□□□□□ -2.26
CSMD3Q7Z407 AC005297.2-201ENST00000450430 606 ntBASIC0.91□□□□□ -2.26
CSMD3Q7Z407 AC023790.1-201ENST00000482174 347 ntBASIC0.91□□□□□ -2.26
CSMD3Q7Z407 RNU4-60P-201ENST00000517239 135 ntBASIC0.91□□□□□ -2.26
CSMD3Q7Z407 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC0.91□□□□□ -2.26
CSMD3Q7Z407 NPM1P52-201ENST00000518264 846 ntBASIC0.91□□□□□ -2.26
CSMD3Q7Z407 AP003033.1-201ENST00000527244 415 ntBASIC0.91□□□□□ -2.26
CSMD3Q7Z407 MIR6078-201ENST00000611069 100 ntBASIC0.91□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms