Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC0.88□□□□□ -2.27
VPS13CQ709C8 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
VPS13CQ709C8 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC0.88□□□□□ -2.27
VPS13CQ709C8 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC0.88□□□□□ -2.27
VPS13CQ709C8 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
VPS13CQ709C8 MTND4LP22-201ENST00000508209 276 ntBASIC0.88□□□□□ -2.27
VPS13CQ709C8 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC0.88□□□□□ -2.27
VPS13CQ709C8 RNA5SP330-201ENST00000517096 96 ntBASIC0.88□□□□□ -2.27
VPS13CQ709C8 IMMP1LP2-201ENST00000552954 492 ntBASIC0.88□□□□□ -2.27
VPS13CQ709C8 U6.98-201ENST00000637157 84 ntBASIC0.88□□□□□ -2.27
VPS13CQ709C8 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC0.88□□□□□ -2.27
VPS13CQ709C8 RNA5SP465-201ENST00000391195 109 ntBASIC0.87□□□□□ -2.27
VPS13CQ709C8 PTGES3P5-201ENST00000455109 434 ntBASIC0.87□□□□□ -2.27
VPS13CQ709C8 MTCO2P9-201ENST00000503214 694 ntBASIC0.87□□□□□ -2.27
VPS13CQ709C8 AK3P2-201ENST00000507976 429 ntBASIC0.87□□□□□ -2.27
VPS13CQ709C8 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC0.87□□□□□ -2.27
VPS13CQ709C8 AP003072.2-201ENST00000527756 676 ntBASIC0.87□□□□□ -2.27
VPS13CQ709C8 OR8X1P-201ENST00000534542 869 ntBASIC0.87□□□□□ -2.27
VPS13CQ709C8 AC006270.3-201ENST00000605967 1036 ntBASIC0.87□□□□□ -2.27
VPS13CQ709C8 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC0.87□□□□□ -2.27
VPS13CQ709C8 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC0.87□□□□□ -2.27
VPS13CQ709C8 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC0.87□□□□□ -2.27
VPS13CQ709C8 AP005597.4-201ENST00000526762 229 ntBASIC0.87□□□□□ -2.27
VPS13CQ709C8 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC0.87□□□□□ -2.27
VPS13CQ709C8 AC025918.2-201ENST00000558683 763 ntBASIC0.87□□□□□ -2.27
VPS13CQ709C8 ZNF734P-201ENST00000419494 1534 ntBASIC0.87□□□□□ -2.27
VPS13CQ709C8 RPL7P34-201ENST00000433316 712 ntBASIC0.87□□□□□ -2.27
VPS13CQ709C8 RNU4-60P-201ENST00000517239 135 ntBASIC0.87□□□□□ -2.27
VPS13CQ709C8 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.87□□□□□ -2.27
VPS13CQ709C8 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
VPS13CQ709C8 HMGB1P13-201ENST00000406019 642 ntBASIC0.86□□□□□ -2.27
VPS13CQ709C8 RPL30P4-201ENST00000429309 333 ntBASIC0.86□□□□□ -2.27
VPS13CQ709C8 AL596276.1-201ENST00000434465 418 ntBASIC0.86□□□□□ -2.27
VPS13CQ709C8 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC0.86□□□□□ -2.27
VPS13CQ709C8 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC0.86□□□□□ -2.27
VPS13CQ709C8 SNHG22-203ENST00000617833 660 ntBASIC0.86□□□□□ -2.27
VPS13CQ709C8 RNA5SP295-201ENST00000362655 121 ntBASIC0.86□□□□□ -2.27
VPS13CQ709C8 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.86□□□□□ -2.27
VPS13CQ709C8 AL030996.1-201ENST00000411430 235 ntBASIC0.86□□□□□ -2.27
VPS13CQ709C8 MTND4P31-201ENST00000425607 1343 ntBASIC0.86□□□□□ -2.27
VPS13CQ709C8 RPS26P21-201ENST00000475397 348 ntBASIC0.86□□□□□ -2.27
VPS13CQ709C8 AC087343.1-201ENST00000477341 475 ntBASIC0.86□□□□□ -2.27
VPS13CQ709C8 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.86□□□□□ -2.27
VPS13CQ709C8 CENPCP1-201ENST00000533085 2578 ntBASIC0.86□□□□□ -2.27
VPS13CQ709C8 AC016877.3-201ENST00000606778 504 ntBASIC0.86□□□□□ -2.27
VPS13CQ709C8 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC0.86□□□□□ -2.27
VPS13CQ709C8 AC091925.1-201ENST00000623204 462 ntBASIC0.86□□□□□ -2.27
VPS13CQ709C8 CNOT6LP1-201ENST00000559681 1462 ntBASIC0.86□□□□□ -2.27
VPS13CQ709C8 SNORD114-23-201ENST00000363536 72 ntBASIC0.86□□□□□ -2.27
VPS13CQ709C8 RNU11-5P-201ENST00000391216 129 ntBASIC0.86□□□□□ -2.27
VPS13CQ709C8 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC0.86□□□□□ -2.27
VPS13CQ709C8 RPL31P63-201ENST00000422565 375 ntBASIC0.86□□□□□ -2.27
VPS13CQ709C8 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC0.86□□□□□ -2.27
VPS13CQ709C8 RPL21P39-201ENST00000463605 483 ntBASIC0.86□□□□□ -2.27
VPS13CQ709C8 AC087588.2-201ENST00000617667 426 ntBASIC0.86□□□□□ -2.27
VPS13CQ709C8 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC0.86□□□□□ -2.27
VPS13CQ709C8 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC0.85□□□□□ -2.27
VPS13CQ709C8 MRPS36P1-201ENST00000421291 307 ntBASIC0.85□□□□□ -2.27
VPS13CQ709C8 SETP2-201ENST00000553886 926 ntBASIC0.85□□□□□ -2.27
VPS13CQ709C8 AL158032.1-201ENST00000605401 106 ntBASIC0.85□□□□□ -2.27
VPS13CQ709C8 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC0.85□□□□□ -2.27
VPS13CQ709C8 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC0.85□□□□□ -2.27
VPS13CQ709C8 ICE2P2-201ENST00000483823 2787 ntBASIC0.85□□□□□ -2.27
VPS13CQ709C8 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC0.85□□□□□ -2.27
VPS13CQ709C8 RN7SKP51-201ENST00000410781 304 ntBASIC0.85□□□□□ -2.27
VPS13CQ709C8 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC0.85□□□□□ -2.27
VPS13CQ709C8 RNU11-2P-201ENST00000516898 142 ntBASIC0.85□□□□□ -2.27
VPS13CQ709C8 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
VPS13CQ709C8 MTND4P12-201ENST00000498999 1377 ntBASIC0.85□□□□□ -2.27
VPS13CQ709C8 AC087808.1-201ENST00000520501 361 ntBASIC0.85□□□□□ -2.27
VPS13CQ709C8 HSPE1P4-201ENST00000550617 308 ntBASIC0.85□□□□□ -2.27
VPS13CQ709C8 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC0.85□□□□□ -2.27
VPS13CQ709C8 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC0.85□□□□□ -2.27
VPS13CQ709C8 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
VPS13CQ709C8 MIR591-201ENST00000385290 95 ntBASIC0.84□□□□□ -2.27
VPS13CQ709C8 MIR1285-1-201ENST00000408593 84 ntBASIC0.84□□□□□ -2.27
VPS13CQ709C8 USP9YP33-201ENST00000412220 421 ntBASIC0.84□□□□□ -2.27
VPS13CQ709C8 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC0.84□□□□□ -2.27
VPS13CQ709C8 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC0.84□□□□□ -2.27
VPS13CQ709C8 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
VPS13CQ709C8 AC093852.1-201ENST00000503587 266 ntBASIC0.84□□□□□ -2.27
VPS13CQ709C8 PRELID3BP4-201ENST00000515476 571 ntBASIC0.84□□□□□ -2.27
VPS13CQ709C8 AC005034.5-201ENST00000604219 466 ntBASIC0.84□□□□□ -2.27
VPS13CQ709C8 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC0.84□□□□□ -2.27
VPS13CQ709C8 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC0.84□□□□□ -2.27
VPS13CQ709C8 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC0.84□□□□□ -2.27
VPS13CQ709C8 Y_RNA.48-201ENST00000362710 103 ntBASIC0.84□□□□□ -2.27
VPS13CQ709C8 RPL7P27-201ENST00000403775 720 ntBASIC0.84□□□□□ -2.27
VPS13CQ709C8 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC0.84□□□□□ -2.27
VPS13CQ709C8 SNORA31.16-201ENST00000516773 139 ntBASIC0.84□□□□□ -2.27
VPS13CQ709C8 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC0.84□□□□□ -2.27
VPS13CQ709C8 AL132857.1-201ENST00000555180 708 ntBASIC0.84□□□□□ -2.27
VPS13CQ709C8 MTCO1P40-201ENST00000574371 625 ntBASIC0.84□□□□□ -2.27
VPS13CQ709C8 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.84□□□□□ -2.27
VPS13CQ709C8 RNU6-670P-201ENST00000364312 104 ntBASIC0.84□□□□□ -2.28
VPS13CQ709C8 RPL7P18-201ENST00000478965 734 ntBASIC0.84□□□□□ -2.28
VPS13CQ709C8 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC0.84□□□□□ -2.28
VPS13CQ709C8 DUXAP3-201ENST00000603616 594 ntBASIC0.84□□□□□ -2.28
VPS13CQ709C8 AC123912.3-201ENST00000600907 1367 ntBASIC0.84□□□□□ -2.28
VPS13CQ709C8 RNU4-38P-201ENST00000364472 129 ntBASIC0.83□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms