Protein–RNA interactions for Protein: Q6ZV77

C9orf139, Uncharacterized protein C9orf139, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139Q6ZV77 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.18□□□□□ -1.9
C9orf139Q6ZV77 AC087499.8-201ENST00000578406 226 ntBASIC3.18□□□□□ -1.9
C9orf139Q6ZV77 OR4K8P-201ENST00000578842 1048 ntBASIC3.18□□□□□ -1.9
C9orf139Q6ZV77 AC007687.1-201ENST00000602704 304 ntBASIC3.18□□□□□ -1.9
C9orf139Q6ZV77 AC012669.1-201ENST00000603209 283 ntBASIC3.18□□□□□ -1.9
C9orf139Q6ZV77 AL158211.4-201ENST00000606988 584 ntBASIC3.18□□□□□ -1.9
C9orf139Q6ZV77 AL121772.2-201ENST00000614331 297 ntBASIC3.18□□□□□ -1.9
C9orf139Q6ZV77 AL354950.2-201ENST00000617939 290 ntBASIC3.18□□□□□ -1.9
C9orf139Q6ZV77 AC010338.1-201ENST00000621823 717 ntBASIC3.18□□□□□ -1.9
C9orf139Q6ZV77 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.18□□□□□ -1.9
C9orf139Q6ZV77 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
C9orf139Q6ZV77 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.18□□□□□ -1.9
C9orf139Q6ZV77 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
C9orf139Q6ZV77 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
C9orf139Q6ZV77 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.17□□□□□ -1.9
C9orf139Q6ZV77 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
C9orf139Q6ZV77 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
C9orf139Q6ZV77 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
C9orf139Q6ZV77 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
C9orf139Q6ZV77 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
C9orf139Q6ZV77 MTND4P29-201ENST00000503122 1372 ntBASIC3.17□□□□□ -1.9
C9orf139Q6ZV77 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC3.17□□□□□ -1.9
C9orf139Q6ZV77 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
C9orf139Q6ZV77 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
C9orf139Q6ZV77 RNU6-335P-201ENST00000364563 113 ntBASIC3.17□□□□□ -1.9
C9orf139Q6ZV77 SNORA51.2-201ENST00000364595 132 ntBASIC3.17□□□□□ -1.9
C9orf139Q6ZV77 RNU6-606P-201ENST00000384721 111 ntBASIC3.17□□□□□ -1.9
C9orf139Q6ZV77 MIR558-201ENST00000384920 94 ntBASIC3.17□□□□□ -1.9
C9orf139Q6ZV77 MIR607-201ENST00000385241 96 ntBASIC3.17□□□□□ -1.9
C9orf139Q6ZV77 MIR199A2-201ENST00000385289 110 ntBASIC3.17□□□□□ -1.9
C9orf139Q6ZV77 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
C9orf139Q6ZV77 RNU6-278P-201ENST00000390945 109 ntBASIC3.17□□□□□ -1.9
C9orf139Q6ZV77 RNU6-1009P-201ENST00000390996 107 ntBASIC3.17□□□□□ -1.9
C9orf139Q6ZV77 RAB9AP3-201ENST00000412737 573 ntBASIC3.17□□□□□ -1.9
C9orf139Q6ZV77 RAC1P3-201ENST00000416129 580 ntBASIC3.17□□□□□ -1.9
C9orf139Q6ZV77 AC004552.1-201ENST00000419089 348 ntBASIC3.17□□□□□ -1.9
C9orf139Q6ZV77 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.17□□□□□ -1.9
C9orf139Q6ZV77 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.17□□□□□ -1.9
C9orf139Q6ZV77 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.17□□□□□ -1.9
C9orf139Q6ZV77 RAB9AP1-201ENST00000449393 573 ntBASIC3.17□□□□□ -1.9
C9orf139Q6ZV77 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.17□□□□□ -1.9
C9orf139Q6ZV77 AL356010.1-201ENST00000456364 102 ntBASIC3.17□□□□□ -1.9
C9orf139Q6ZV77 AC006512.1-201ENST00000468816 291 ntBASIC3.17□□□□□ -1.9
C9orf139Q6ZV77 RPS26P3-201ENST00000470205 348 ntBASIC3.17□□□□□ -1.9
C9orf139Q6ZV77 AC090543.2-201ENST00000483963 348 ntBASIC3.17□□□□□ -1.9
C9orf139Q6ZV77 AC004057.1-201ENST00000485827 348 ntBASIC3.17□□□□□ -1.9
C9orf139Q6ZV77 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC3.17□□□□□ -1.9
C9orf139Q6ZV77 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
C9orf139Q6ZV77 AC025554.1-201ENST00000505641 188 ntBASIC3.17□□□□□ -1.9
C9orf139Q6ZV77 SNORD27.1-201ENST00000516319 72 ntBASIC3.17□□□□□ -1.9
C9orf139Q6ZV77 RNA5SP309-201ENST00000516670 106 ntBASIC3.17□□□□□ -1.9
C9orf139Q6ZV77 RNU6-64P-201ENST00000517119 105 ntBASIC3.17□□□□□ -1.9
C9orf139Q6ZV77 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.17□□□□□ -1.9
C9orf139Q6ZV77 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
C9orf139Q6ZV77 AC011979.2-201ENST00000527568 352 ntBASIC3.17□□□□□ -1.9
C9orf139Q6ZV77 AC103843.2-201ENST00000530523 682 ntBASIC3.17□□□□□ -1.9
C9orf139Q6ZV77 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.17□□□□□ -1.9
C9orf139Q6ZV77 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.17□□□□□ -1.9
C9orf139Q6ZV77 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC3.17□□□□□ -1.9
C9orf139Q6ZV77 ARL2BPP2-201ENST00000550907 489 ntBASIC3.17□□□□□ -1.9
C9orf139Q6ZV77 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.17□□□□□ -1.9
C9orf139Q6ZV77 RPL21P12-201ENST00000559810 515 ntBASIC3.17□□□□□ -1.9
C9orf139Q6ZV77 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.17□□□□□ -1.9
C9orf139Q6ZV77 MIR4293-201ENST00000584305 78 ntBASIC3.17□□□□□ -1.9
C9orf139Q6ZV77 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.17□□□□□ -1.9
C9orf139Q6ZV77 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.17□□□□□ -1.9
C9orf139Q6ZV77 DISC2.1-201ENST00000612827 205 ntBASIC3.17□□□□□ -1.9
C9orf139Q6ZV77 AC233309.1-201ENST00000619522 751 ntBASIC3.17□□□□□ -1.9
C9orf139Q6ZV77 LINC02471-203ENST00000641941 4752 ntBASIC3.17□□□□□ -1.9
C9orf139Q6ZV77 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
C9orf139Q6ZV77 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.17□□□□□ -1.9
C9orf139Q6ZV77 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
C9orf139Q6ZV77 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.17□□□□□ -1.9
C9orf139Q6ZV77 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
C9orf139Q6ZV77 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
C9orf139Q6ZV77 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
C9orf139Q6ZV77 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
C9orf139Q6ZV77 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.17□□□□□ -1.9
C9orf139Q6ZV77 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.17□□□□□ -1.9
C9orf139Q6ZV77 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.17□□□□□ -1.9
C9orf139Q6ZV77 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
C9orf139Q6ZV77 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
C9orf139Q6ZV77 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.16□□□□□ -1.9
C9orf139Q6ZV77 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.16□□□□□ -1.9
C9orf139Q6ZV77 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.16□□□□□ -1.9
C9orf139Q6ZV77 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
C9orf139Q6ZV77 RNA5SP124-201ENST00000362739 110 ntBASIC3.16□□□□□ -1.9
C9orf139Q6ZV77 Y_RNA.255-201ENST00000364581 97 ntBASIC3.16□□□□□ -1.9
C9orf139Q6ZV77 RNU4-48P-201ENST00000365559 182 ntBASIC3.16□□□□□ -1.9
C9orf139Q6ZV77 RNA5SP118-201ENST00000410385 109 ntBASIC3.16□□□□□ -1.9
C9orf139Q6ZV77 RNU6-516P-201ENST00000411381 104 ntBASIC3.16□□□□□ -1.9
C9orf139Q6ZV77 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC3.16□□□□□ -1.9
C9orf139Q6ZV77 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
C9orf139Q6ZV77 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.16□□□□□ -1.9
C9orf139Q6ZV77 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.16□□□□□ -1.9
C9orf139Q6ZV77 OR2AS1P-201ENST00000427827 319 ntBASIC3.16□□□□□ -1.9
C9orf139Q6ZV77 RPL36AP53-201ENST00000432891 316 ntBASIC3.16□□□□□ -1.9
C9orf139Q6ZV77 MTATP6P16-201ENST00000434543 526 ntBASIC3.16□□□□□ -1.9
C9orf139Q6ZV77 DDX3P2-201ENST00000446138 111 ntBASIC3.16□□□□□ -1.9
C9orf139Q6ZV77 AC016696.1-201ENST00000446949 318 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms