Protein–RNA interactions for Protein: Q5W0Q7

USPL1, SUMO-specific isopeptidase USPL1, humanhuman

Predictions only

Length 1,092 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1Q5W0Q7 AC039056.2-201ENST00000622261 511 ntBASIC5.45□□□□□ -1.54
USPL1Q5W0Q7 AC091925.1-201ENST00000623204 462 ntBASIC5.45□□□□□ -1.54
USPL1Q5W0Q7 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC5.45□□□□□ -1.54
USPL1Q5W0Q7 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
USPL1Q5W0Q7 AC015813.6-201ENST00000624409 5808 ntBASIC5.45□□□□□ -1.54
USPL1Q5W0Q7 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.44□□□□□ -1.54
USPL1Q5W0Q7 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
USPL1Q5W0Q7 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC5.44□□□□□ -1.54
USPL1Q5W0Q7 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
USPL1Q5W0Q7 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
USPL1Q5W0Q7 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC5.44□□□□□ -1.54
USPL1Q5W0Q7 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC5.44□□□□□ -1.54
USPL1Q5W0Q7 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
USPL1Q5W0Q7 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC5.44□□□□□ -1.54
USPL1Q5W0Q7 AC011155.1-201ENST00000316512 456 ntBASIC5.44□□□□□ -1.54
USPL1Q5W0Q7 RNU6-1252P-201ENST00000363054 104 ntBASIC5.44□□□□□ -1.54
USPL1Q5W0Q7 RNU6-946P-201ENST00000383878 107 ntBASIC5.44□□□□□ -1.54
USPL1Q5W0Q7 RNU1-63P-201ENST00000383902 164 ntBASIC5.44□□□□□ -1.54
USPL1Q5W0Q7 RNA5SP56-201ENST00000410277 118 ntBASIC5.44□□□□□ -1.54
USPL1Q5W0Q7 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC5.44□□□□□ -1.54
USPL1Q5W0Q7 CYCSP10-201ENST00000417973 294 ntBASIC5.44□□□□□ -1.54
USPL1Q5W0Q7 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
USPL1Q5W0Q7 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC5.44□□□□□ -1.54
USPL1Q5W0Q7 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC5.44□□□□□ -1.54
USPL1Q5W0Q7 IPO7P1-201ENST00000442031 636 ntBASIC5.44□□□□□ -1.54
USPL1Q5W0Q7 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
USPL1Q5W0Q7 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.44□□□□□ -1.54
USPL1Q5W0Q7 DEFB109F-201ENST00000491870 277 ntBASIC5.44□□□□□ -1.54
USPL1Q5W0Q7 AL592156.1-201ENST00000508758 304 ntBASIC5.44□□□□□ -1.54
USPL1Q5W0Q7 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC5.44□□□□□ -1.54
USPL1Q5W0Q7 RGS4-209ENST00000531057 544 ntTSL 4 BASIC5.44□□□□□ -1.54
USPL1Q5W0Q7 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.44□□□□□ -1.54
USPL1Q5W0Q7 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC5.44□□□□□ -1.54
USPL1Q5W0Q7 DYNLL1P4-201ENST00000549314 266 ntBASIC5.44□□□□□ -1.54
USPL1Q5W0Q7 MIR3941-201ENST00000582572 103 ntBASIC5.44□□□□□ -1.54
USPL1Q5W0Q7 AF038458.1-201ENST00000588406 262 ntBASIC5.44□□□□□ -1.54
USPL1Q5W0Q7 AL670379.10-201ENST00000604330 253 ntBASIC5.44□□□□□ -1.54
USPL1Q5W0Q7 AL670379.9-201ENST00000605428 253 ntBASIC5.44□□□□□ -1.54
USPL1Q5W0Q7 AP000654.2-201ENST00000605633 586 ntBASIC5.44□□□□□ -1.54
USPL1Q5W0Q7 U2.17-201ENST00000611454 95 ntBASIC5.44□□□□□ -1.54
USPL1Q5W0Q7 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
USPL1Q5W0Q7 MIR4275-201ENST00000636486 87 ntBASIC5.44□□□□□ -1.54
USPL1Q5W0Q7 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
USPL1Q5W0Q7 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC5.44□□□□□ -1.54
USPL1Q5W0Q7 MTND5P19-201ENST00000424872 1794 ntBASIC5.44□□□□□ -1.54
USPL1Q5W0Q7 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC5.44□□□□□ -1.54
USPL1Q5W0Q7 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
USPL1Q5W0Q7 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
USPL1Q5W0Q7 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
USPL1Q5W0Q7 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
USPL1Q5W0Q7 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
USPL1Q5W0Q7 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
USPL1Q5W0Q7 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
USPL1Q5W0Q7 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC5.43□□□□□ -1.54
USPL1Q5W0Q7 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
USPL1Q5W0Q7 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.43□□□□□ -1.54
USPL1Q5W0Q7 Y_RNA.31-201ENST00000362574 102 ntBASIC5.43□□□□□ -1.54
USPL1Q5W0Q7 RNU6-128P-201ENST00000383976 107 ntBASIC5.43□□□□□ -1.54
USPL1Q5W0Q7 RNU6-601P-201ENST00000384540 107 ntBASIC5.43□□□□□ -1.54
USPL1Q5W0Q7 RNU6-1105P-201ENST00000384774 107 ntBASIC5.43□□□□□ -1.54
USPL1Q5W0Q7 MIR195-201ENST00000385194 87 ntBASIC5.43□□□□□ -1.54
USPL1Q5W0Q7 RN7SKP167-201ENST00000411047 285 ntBASIC5.43□□□□□ -1.54
USPL1Q5W0Q7 LAMTOR3P1-201ENST00000428620 370 ntBASIC5.43□□□□□ -1.54
USPL1Q5W0Q7 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC5.43□□□□□ -1.54
USPL1Q5W0Q7 AC007389.2-201ENST00000434630 306 ntBASIC5.43□□□□□ -1.54
USPL1Q5W0Q7 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC5.43□□□□□ -1.54
USPL1Q5W0Q7 TRAPPC2P8-201ENST00000440676 396 ntBASIC5.43□□□□□ -1.54
USPL1Q5W0Q7 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC5.43□□□□□ -1.54
USPL1Q5W0Q7 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC5.43□□□□□ -1.54
USPL1Q5W0Q7 AL162388.1-201ENST00000450912 352 ntBASIC5.43□□□□□ -1.54
USPL1Q5W0Q7 AC007967.1-201ENST00000455422 1159 ntBASIC5.43□□□□□ -1.54
USPL1Q5W0Q7 RPL30P15-201ENST00000457129 321 ntBASIC5.43□□□□□ -1.54
USPL1Q5W0Q7 RPL21P93-201ENST00000480465 489 ntBASIC5.43□□□□□ -1.54
USPL1Q5W0Q7 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC5.43□□□□□ -1.54
USPL1Q5W0Q7 RNU6-1046P-201ENST00000516538 107 ntBASIC5.43□□□□□ -1.54
USPL1Q5W0Q7 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC5.43□□□□□ -1.54
USPL1Q5W0Q7 HNRNPCP4-201ENST00000571636 900 ntBASIC5.43□□□□□ -1.54
USPL1Q5W0Q7 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC5.43□□□□□ -1.54
USPL1Q5W0Q7 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
USPL1Q5W0Q7 AC100830.2-201ENST00000581636 240 ntBASIC5.43□□□□□ -1.54
USPL1Q5W0Q7 AC091178.1-203ENST00000584586 279 ntBASIC5.43□□□□□ -1.54
USPL1Q5W0Q7 AC009570.1-201ENST00000609599 745 ntBASIC5.43□□□□□ -1.54
USPL1Q5W0Q7 AL138726.1-201ENST00000614873 333 ntBASIC5.43□□□□□ -1.54
USPL1Q5W0Q7 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
USPL1Q5W0Q7 AC007998.5-201ENST00000622938 237 ntBASIC5.43□□□□□ -1.54
USPL1Q5W0Q7 AC110801.1-201ENST00000623590 212 ntBASIC5.43□□□□□ -1.54
USPL1Q5W0Q7 AC008079.2-201ENST00000623543 20396 ntBASIC5.43□□□□□ -1.54
USPL1Q5W0Q7 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.43□□□□□ -1.54
USPL1Q5W0Q7 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC5.43□□□□□ -1.54
USPL1Q5W0Q7 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
USPL1Q5W0Q7 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
USPL1Q5W0Q7 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC5.43□□□□□ -1.54
USPL1Q5W0Q7 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
USPL1Q5W0Q7 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC5.43□□□□□ -1.54
USPL1Q5W0Q7 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC5.43□□□□□ -1.54
USPL1Q5W0Q7 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
USPL1Q5W0Q7 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC5.43□□□□□ -1.54
USPL1Q5W0Q7 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC5.42□□□□□ -1.54
USPL1Q5W0Q7 SUPT16HP1-201ENST00000537175 3133 ntBASIC5.42□□□□□ -1.54
USPL1Q5W0Q7 ZNF519P1-201ENST00000449011 1626 ntBASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms