Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 AC017083.1-201ENST00000428093 483 ntBASIC3.9□□□□□ -1.79
RNF220Q5VTB9 AC007919.1-201ENST00000429380 217 ntBASIC3.9□□□□□ -1.79
RNF220Q5VTB9 MRPS10P2-201ENST00000431226 381 ntBASIC3.9□□□□□ -1.79
RNF220Q5VTB9 AL591212.2-201ENST00000433923 257 ntBASIC3.9□□□□□ -1.79
RNF220Q5VTB9 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.9□□□□□ -1.79
RNF220Q5VTB9 ATP6V0E1P2-201ENST00000441771 245 ntBASIC3.9□□□□□ -1.79
RNF220Q5VTB9 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC3.9□□□□□ -1.79
RNF220Q5VTB9 RPL21P133-201ENST00000443666 476 ntBASIC3.9□□□□□ -1.79
RNF220Q5VTB9 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.9□□□□□ -1.79
RNF220Q5VTB9 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.9□□□□□ -1.79
RNF220Q5VTB9 AC004801.2-202ENST00000463559 283 ntBASIC3.9□□□□□ -1.79
RNF220Q5VTB9 AL163973.1-201ENST00000484753 577 ntBASIC3.9□□□□□ -1.79
RNF220Q5VTB9 RPL39P36-201ENST00000490784 156 ntBASIC3.9□□□□□ -1.79
RNF220Q5VTB9 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.9□□□□□ -1.79
RNF220Q5VTB9 APOOP4-201ENST00000513530 597 ntBASIC3.9□□□□□ -1.79
RNF220Q5VTB9 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.9□□□□□ -1.79
RNF220Q5VTB9 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC3.9□□□□□ -1.79
RNF220Q5VTB9 MTND1P35-201ENST00000526739 508 ntBASIC3.9□□□□□ -1.79
RNF220Q5VTB9 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC3.9□□□□□ -1.79
RNF220Q5VTB9 RANP3-201ENST00000530970 276 ntBASIC3.9□□□□□ -1.79
RNF220Q5VTB9 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.9□□□□□ -1.79
RNF220Q5VTB9 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC3.9□□□□□ -1.79
RNF220Q5VTB9 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC3.9□□□□□ -1.79
RNF220Q5VTB9 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.9□□□□□ -1.79
RNF220Q5VTB9 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.9□□□□□ -1.79
RNF220Q5VTB9 AC006504.3-201ENST00000586818 523 ntBASIC3.9□□□□□ -1.79
RNF220Q5VTB9 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC3.9□□□□□ -1.79
RNF220Q5VTB9 AC107294.1-201ENST00000609524 467 ntBASIC3.9□□□□□ -1.79
RNF220Q5VTB9 FAM27D1-201ENST00000612308 341 ntBASIC3.9□□□□□ -1.79
RNF220Q5VTB9 AL356321.1-201ENST00000621360 228 ntBASIC3.9□□□□□ -1.79
RNF220Q5VTB9 AL445363.3-201ENST00000623080 671 ntBASIC3.9□□□□□ -1.79
RNF220Q5VTB9 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC3.9□□□□□ -1.79
RNF220Q5VTB9 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.9□□□□□ -1.79
RNF220Q5VTB9 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
RNF220Q5VTB9 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
RNF220Q5VTB9 AC007785.2-201ENST00000598627 1916 ntBASIC3.89□□□□□ -1.79
RNF220Q5VTB9 AF117829.1-206ENST00000621883 3802 ntBASIC3.89□□□□□ -1.79
RNF220Q5VTB9 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.89□□□□□ -1.79
RNF220Q5VTB9 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
RNF220Q5VTB9 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
RNF220Q5VTB9 RNU1-14P-201ENST00000362759 152 ntBASIC3.89□□□□□ -1.79
RNF220Q5VTB9 RNU6-1287P-201ENST00000362914 107 ntBASIC3.89□□□□□ -1.79
RNF220Q5VTB9 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.89□□□□□ -1.79
RNF220Q5VTB9 RNU6-1060P-201ENST00000384664 107 ntBASIC3.89□□□□□ -1.79
RNF220Q5VTB9 RPS4XP9-201ENST00000405151 780 ntBASIC3.89□□□□□ -1.79
RNF220Q5VTB9 SNORA11B-201ENST00000408175 129 ntBASIC3.89□□□□□ -1.79
RNF220Q5VTB9 RNU2-33P-201ENST00000410344 192 ntBASIC3.89□□□□□ -1.79
RNF220Q5VTB9 RNU2-29P-201ENST00000410423 189 ntBASIC3.89□□□□□ -1.79
RNF220Q5VTB9 RN7SKP53-201ENST00000411337 315 ntBASIC3.89□□□□□ -1.79
RNF220Q5VTB9 ELOCP19-201ENST00000411919 318 ntBASIC3.89□□□□□ -1.79
RNF220Q5VTB9 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.89□□□□□ -1.79
RNF220Q5VTB9 AC068533.1-201ENST00000418542 415 ntBASIC3.89□□□□□ -1.79
RNF220Q5VTB9 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.89□□□□□ -1.79
RNF220Q5VTB9 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.89□□□□□ -1.79
RNF220Q5VTB9 TMEM167AP1-201ENST00000423409 219 ntBASIC3.89□□□□□ -1.79
RNF220Q5VTB9 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC3.89□□□□□ -1.79
RNF220Q5VTB9 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.89□□□□□ -1.79
RNF220Q5VTB9 SNORA71B-202ENST00000439232 272 ntBASIC3.89□□□□□ -1.79
RNF220Q5VTB9 SEPT14P3-201ENST00000439401 183 ntBASIC3.89□□□□□ -1.79
RNF220Q5VTB9 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.89□□□□□ -1.79
RNF220Q5VTB9 AL732372.2-207ENST00000445840 183 ntBASIC3.89□□□□□ -1.79
RNF220Q5VTB9 AC114755.5-201ENST00000447760 831 ntBASIC3.89□□□□□ -1.79
RNF220Q5VTB9 SEPT14P2-201ENST00000453405 183 ntBASIC3.89□□□□□ -1.79
RNF220Q5VTB9 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.89□□□□□ -1.79
RNF220Q5VTB9 RPL23AP24-201ENST00000458203 385 ntBASIC3.89□□□□□ -1.79
RNF220Q5VTB9 SNRPGP3-201ENST00000469405 227 ntBASIC3.89□□□□□ -1.79
RNF220Q5VTB9 AC233702.1-201ENST00000482905 502 ntBASIC3.89□□□□□ -1.79
RNF220Q5VTB9 RN7SL691P-201ENST00000494487 301 ntBASIC3.89□□□□□ -1.79
RNF220Q5VTB9 SEPT14P4-201ENST00000513445 186 ntBASIC3.89□□□□□ -1.79
RNF220Q5VTB9 RNU6-123P-201ENST00000516163 102 ntBASIC3.89□□□□□ -1.79
RNF220Q5VTB9 RNU6-1178P-201ENST00000516674 107 ntBASIC3.89□□□□□ -1.79
RNF220Q5VTB9 RNU6-835P-201ENST00000516974 104 ntBASIC3.89□□□□□ -1.79
RNF220Q5VTB9 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.89□□□□□ -1.79
RNF220Q5VTB9 FO082796.1-201ENST00000523795 183 ntBASIC3.89□□□□□ -1.79
RNF220Q5VTB9 AC063950.1-201ENST00000552036 308 ntBASIC3.89□□□□□ -1.79
RNF220Q5VTB9 AC092325.1-201ENST00000566449 554 ntBASIC3.89□□□□□ -1.79
RNF220Q5VTB9 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.89□□□□□ -1.79
RNF220Q5VTB9 MIR4703-201ENST00000577728 79 ntBASIC3.89□□□□□ -1.79
RNF220Q5VTB9 AC053481.4-201ENST00000583164 216 ntBASIC3.89□□□□□ -1.79
RNF220Q5VTB9 MIR4715-201ENST00000584117 79 ntBASIC3.89□□□□□ -1.79
RNF220Q5VTB9 AC008521.1-201ENST00000587471 187 ntBASIC3.89□□□□□ -1.79
RNF220Q5VTB9 AC234771.5-201ENST00000600161 514 ntBASIC3.89□□□□□ -1.79
RNF220Q5VTB9 AC008945.2-201ENST00000606056 604 ntBASIC3.89□□□□□ -1.79
RNF220Q5VTB9 AC022893.3-201ENST00000607665 437 ntBASIC3.89□□□□□ -1.79
RNF220Q5VTB9 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
RNF220Q5VTB9 MIR6730-201ENST00000622213 67 ntBASIC3.89□□□□□ -1.79
RNF220Q5VTB9 FER-210ENST00000628534 558 ntTSL 5 BASIC3.89□□□□□ -1.79
RNF220Q5VTB9 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.89□□□□□ -1.79
RNF220Q5VTB9 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.89□□□□□ -1.79
RNF220Q5VTB9 AC012618.3-205ENST00000637896 1496 ntBASIC3.89□□□□□ -1.79
RNF220Q5VTB9 ZNF807-201ENST00000328088 1707 ntBASIC3.89□□□□□ -1.79
RNF220Q5VTB9 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
RNF220Q5VTB9 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.89□□□□□ -1.79
RNF220Q5VTB9 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
RNF220Q5VTB9 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
RNF220Q5VTB9 CUL1P1-201ENST00000509510 2425 ntBASIC3.89□□□□□ -1.79
RNF220Q5VTB9 AC103710.2-202ENST00000641454 2853 ntBASIC3.88□□□□□ -1.79
RNF220Q5VTB9 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
RNF220Q5VTB9 AP001486.2-201ENST00000561652 5113 ntBASIC3.88□□□□□ -1.79
RNF220Q5VTB9 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 186.1 ms