Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 RNU4-38P-201ENST00000364472 129 ntBASIC1.06□□□□□ -2.24
RIF1Q5UIP0 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC1.06□□□□□ -2.24
RIF1Q5UIP0 AC109583.1-201ENST00000432156 268 ntBASIC1.06□□□□□ -2.24
RIF1Q5UIP0 ZNF965P-201ENST00000432501 817 ntBASIC1.06□□□□□ -2.24
RIF1Q5UIP0 AC092902.1-201ENST00000486999 259 ntBASIC1.06□□□□□ -2.24
RIF1Q5UIP0 AC096571.1-202ENST00000506634 735 ntBASIC1.06□□□□□ -2.24
RIF1Q5UIP0 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC1.06□□□□□ -2.24
RIF1Q5UIP0 OR5AQ1P-202ENST00000641257 1534 ntBASIC1.06□□□□□ -2.24
RIF1Q5UIP0 Y_RNA.412-201ENST00000384001 104 ntBASIC1.05□□□□□ -2.24
RIF1Q5UIP0 RNU6-203P-201ENST00000384038 104 ntBASIC1.05□□□□□ -2.24
RIF1Q5UIP0 RNU6-178P-201ENST00000384631 104 ntBASIC1.05□□□□□ -2.24
RIF1Q5UIP0 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC1.05□□□□□ -2.24
RIF1Q5UIP0 ARPC3P2-201ENST00000457786 533 ntBASIC1.05□□□□□ -2.24
RIF1Q5UIP0 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC1.05□□□□□ -2.24
RIF1Q5UIP0 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC1.05□□□□□ -2.24
RIF1Q5UIP0 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC1.05□□□□□ -2.24
RIF1Q5UIP0 AC103833.1-201ENST00000517442 172 ntBASIC1.05□□□□□ -2.24
RIF1Q5UIP0 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.05□□□□□ -2.24
RIF1Q5UIP0 AC007115.1-201ENST00000546853 234 ntBASIC1.05□□□□□ -2.24
RIF1Q5UIP0 MTND5P10-201ENST00000603719 1809 ntBASIC1.05□□□□□ -2.24
RIF1Q5UIP0 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC1.05□□□□□ -2.24
RIF1Q5UIP0 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
RIF1Q5UIP0 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.05□□□□□ -2.24
RIF1Q5UIP0 RNU6-17P-201ENST00000384245 107 ntBASIC1.05□□□□□ -2.24
RIF1Q5UIP0 RNU6-18P-201ENST00000384527 107 ntBASIC1.05□□□□□ -2.24
RIF1Q5UIP0 MIR144-201ENST00000384886 86 ntBASIC1.05□□□□□ -2.24
RIF1Q5UIP0 RNU1-78P-201ENST00000391248 165 ntBASIC1.05□□□□□ -2.24
RIF1Q5UIP0 HMGB1P13-201ENST00000406019 642 ntBASIC1.05□□□□□ -2.24
RIF1Q5UIP0 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC1.05□□□□□ -2.24
RIF1Q5UIP0 AC004022.1-201ENST00000447766 1066 ntBASIC1.05□□□□□ -2.24
RIF1Q5UIP0 AK3P2-201ENST00000507976 429 ntBASIC1.05□□□□□ -2.24
RIF1Q5UIP0 AC005156.1-201ENST00000613371 573 ntBASIC1.05□□□□□ -2.24
RIF1Q5UIP0 MIR338-201ENST00000636369 67 ntBASIC1.05□□□□□ -2.24
RIF1Q5UIP0 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.05□□□□□ -2.24
RIF1Q5UIP0 CUL4AP1-201ENST00000514750 1863 ntBASIC1.04□□□□□ -2.24
RIF1Q5UIP0 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC1.04□□□□□ -2.24
RIF1Q5UIP0 AC123912.3-201ENST00000600907 1367 ntBASIC1.04□□□□□ -2.24
RIF1Q5UIP0 AC011155.1-201ENST00000316512 456 ntBASIC1.04□□□□□ -2.24
RIF1Q5UIP0 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC1.04□□□□□ -2.24
RIF1Q5UIP0 GAS5-AS1-201ENST00000602767 694 ntBASIC1.04□□□□□ -2.24
RIF1Q5UIP0 AC083899.3-201ENST00000603413 594 ntBASIC1.04□□□□□ -2.24
RIF1Q5UIP0 AC112503.2-201ENST00000609005 552 ntBASIC1.04□□□□□ -2.24
RIF1Q5UIP0 AC004808.1-201ENST00000627671 721 ntBASIC1.04□□□□□ -2.24
RIF1Q5UIP0 MIR330-201ENST00000362196 94 ntBASIC1.04□□□□□ -2.24
RIF1Q5UIP0 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC1.04□□□□□ -2.24
RIF1Q5UIP0 AC093801.2-201ENST00000503966 1050 ntBASIC1.04□□□□□ -2.24
RIF1Q5UIP0 SNORA31.16-201ENST00000516773 139 ntBASIC1.04□□□□□ -2.24
RIF1Q5UIP0 SMILR-201ENST00000533992 553 ntTSL 4 BASIC1.04□□□□□ -2.24
RIF1Q5UIP0 CD24P2-201ENST00000565486 219 ntBASIC1.04□□□□□ -2.24
RIF1Q5UIP0 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC1.04□□□□□ -2.24
RIF1Q5UIP0 DUXAP9-208ENST00000622815 614 ntBASIC1.04□□□□□ -2.24
RIF1Q5UIP0 PABPC1P7-201ENST00000413177 1513 ntBASIC1.03□□□□□ -2.24
RIF1Q5UIP0 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.03□□□□□ -2.24
RIF1Q5UIP0 MIR936-201ENST00000401264 98 ntBASIC1.03□□□□□ -2.24
RIF1Q5UIP0 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC1.03□□□□□ -2.24
RIF1Q5UIP0 CR848007.2-201ENST00000424918 787 ntBASIC1.03□□□□□ -2.24
RIF1Q5UIP0 JTBP1-201ENST00000441314 247 ntBASIC1.03□□□□□ -2.24
RIF1Q5UIP0 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC1.03□□□□□ -2.24
RIF1Q5UIP0 SNX5P1-201ENST00000505757 1041 ntBASIC1.03□□□□□ -2.24
RIF1Q5UIP0 SNORD116-26-201ENST00000516006 96 ntBASIC1.03□□□□□ -2.24
RIF1Q5UIP0 AP003072.2-201ENST00000527756 676 ntBASIC1.03□□□□□ -2.24
RIF1Q5UIP0 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.03□□□□□ -2.24
RIF1Q5UIP0 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC1.03□□□□□ -2.24
RIF1Q5UIP0 U73023.1-201ENST00000603134 700 ntBASIC1.03□□□□□ -2.24
RIF1Q5UIP0 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC1.03□□□□□ -2.24
RIF1Q5UIP0 AL118496.1-201ENST00000440201 1812 ntBASIC1.03□□□□□ -2.25
RIF1Q5UIP0 CENPCP1-201ENST00000533085 2578 ntBASIC1.03□□□□□ -2.25
RIF1Q5UIP0 Y_RNA.136-201ENST00000363444 102 ntBASIC1.03□□□□□ -2.25
RIF1Q5UIP0 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC1.03□□□□□ -2.25
RIF1Q5UIP0 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC1.03□□□□□ -2.25
RIF1Q5UIP0 AC092754.2-201ENST00000463506 460 ntBASIC1.03□□□□□ -2.25
RIF1Q5UIP0 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.03□□□□□ -2.25
RIF1Q5UIP0 LRRC34P2-201ENST00000514850 553 ntBASIC1.03□□□□□ -2.25
RIF1Q5UIP0 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC1.03□□□□□ -2.25
RIF1Q5UIP0 EEF1B2P4-201ENST00000551398 348 ntBASIC1.03□□□□□ -2.25
RIF1Q5UIP0 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC1.03□□□□□ -2.25
RIF1Q5UIP0 AL512605.2-201ENST00000592972 256 ntBASIC1.03□□□□□ -2.25
RIF1Q5UIP0 CR382285.2-201ENST00000624662 1495 ntBASIC1.02□□□□□ -2.25
RIF1Q5UIP0 RNU6-105P-201ENST00000363909 104 ntBASIC1.02□□□□□ -2.25
RIF1Q5UIP0 MIR591-201ENST00000385290 95 ntBASIC1.02□□□□□ -2.25
RIF1Q5UIP0 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC1.02□□□□□ -2.25
RIF1Q5UIP0 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC1.02□□□□□ -2.25
RIF1Q5UIP0 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.02□□□□□ -2.25
RIF1Q5UIP0 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC1.02□□□□□ -2.25
RIF1Q5UIP0 AL161713.1-201ENST00000555538 145 ntBASIC1.02□□□□□ -2.25
RIF1Q5UIP0 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
RIF1Q5UIP0 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.02□□□□□ -2.25
RIF1Q5UIP0 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.02□□□□□ -2.25
RIF1Q5UIP0 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
RIF1Q5UIP0 TRAPPC2P5-201ENST00000426293 308 ntBASIC1.01□□□□□ -2.25
RIF1Q5UIP0 RPS15AP7-201ENST00000439294 405 ntBASIC1.01□□□□□ -2.25
RIF1Q5UIP0 RPS15AP34-201ENST00000487776 387 ntBASIC1.01□□□□□ -2.25
RIF1Q5UIP0 AC113155.1-201ENST00000511141 769 ntBASIC1.01□□□□□ -2.25
RIF1Q5UIP0 AC068446.3-201ENST00000555285 382 ntBASIC1.01□□□□□ -2.25
RIF1Q5UIP0 ZNF192P1-203ENST00000565888 810 ntBASIC1.01□□□□□ -2.25
RIF1Q5UIP0 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
RIF1Q5UIP0 MIR4278-201ENST00000636094 69 ntBASIC1.01□□□□□ -2.25
RIF1Q5UIP0 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
RIF1Q5UIP0 SNORD56.5-201ENST00000364281 72 ntBASIC1.01□□□□□ -2.25
RIF1Q5UIP0 RNU6-670P-201ENST00000364312 104 ntBASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms