| HES3 | Q5TGS1 | LINC01326-201 | ENST00000495159 | 755 nt | TSL 2 BASIC | 2.07 | □□□□□ -2.08 | | |
| HES3 | Q5TGS1 | LINC02447-203 | ENST00000504402 | 292 nt | TSL 3 BASIC | 2.07 | □□□□□ -2.08 | | |
| HES3 | Q5TGS1 | CDC42P4-201 | ENST00000510507 | 563 nt | BASIC | 2.07 | □□□□□ -2.08 | | |
| HES3 | Q5TGS1 | AC093248.1-201 | ENST00000513197 | 417 nt | TSL 2 BASIC | 2.07 | □□□□□ -2.08 | | |
| HES3 | Q5TGS1 | AC022483.1-201 | ENST00000514020 | 567 nt | BASIC | 2.07 | □□□□□ -2.08 | | |
| HES3 | Q5TGS1 | OR8K2P-201 | ENST00000524645 | 927 nt | BASIC | 2.07 | □□□□□ -2.08 | | |
| HES3 | Q5TGS1 | AL035078.2-201 | ENST00000533832 | 326 nt | TSL 3 BASIC | 2.07 | □□□□□ -2.08 | | |
| HES3 | Q5TGS1 | AC063948.1-201 | ENST00000547360 | 379 nt | TSL 5 BASIC | 2.07 | □□□□□ -2.08 | | |
| HES3 | Q5TGS1 | AC090502.2-201 | ENST00000549267 | 280 nt | BASIC | 2.07 | □□□□□ -2.08 | | |
| HES3 | Q5TGS1 | ACTR3BP3-201 | ENST00000565577 | 979 nt | BASIC | 2.07 | □□□□□ -2.08 | | |
| HES3 | Q5TGS1 | MIR3670-2-201 | ENST00000582974 | 65 nt | BASIC | 2.07 | □□□□□ -2.08 | | |
| HES3 | Q5TGS1 | MIR3670-1-201 | ENST00000584160 | 65 nt | BASIC | 2.07 | □□□□□ -2.08 | | |
| HES3 | Q5TGS1 | MIR3670-3-201 | ENST00000584855 | 65 nt | BASIC | 2.07 | □□□□□ -2.08 | | |
| HES3 | Q5TGS1 | AC130469.1-201 | ENST00000597256 | 388 nt | TSL 5 BASIC | 2.07 | □□□□□ -2.08 | | |
| HES3 | Q5TGS1 | DUXAP3-201 | ENST00000603616 | 594 nt | BASIC | 2.07 | □□□□□ -2.08 | | |
| HES3 | Q5TGS1 | AC091946.2-201 | ENST00000606105 | 291 nt | BASIC | 2.07 | □□□□□ -2.08 | | |
| HES3 | Q5TGS1 | MIR3670-4-201 | ENST00000612260 | 65 nt | BASIC | 2.07 | □□□□□ -2.08 | | |
| HES3 | Q5TGS1 | AL118556.2-201 | ENST00000614375 | 824 nt | BASIC | 2.07 | □□□□□ -2.08 | | |
| HES3 | Q5TGS1 | SMARCAD1-201 | ENST00000354268 | 4912 nt | APPRIS P3 TSL 1 (best) BASIC | 2.06 | □□□□□ -2.08 | | |
| HES3 | Q5TGS1 | RNU1-105P-201 | ENST00000363470 | 161 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| HES3 | Q5TGS1 | SPANXN3-201 | ENST00000370503 | 590 nt | APPRIS P1 TSL 1 (best) BASIC | 2.06 | □□□□□ -2.08 | | |
| HES3 | Q5TGS1 | RNU2-25P-201 | ENST00000411041 | 191 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| HES3 | Q5TGS1 | AC007566.1-201 | ENST00000427458 | 643 nt | TSL 5 BASIC | 2.06 | □□□□□ -2.08 | | |
| HES3 | Q5TGS1 | MTCYBP32-201 | ENST00000427945 | 1084 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| HES3 | Q5TGS1 | AL591475.1-201 | ENST00000429060 | 489 nt | TSL 2 BASIC | 2.06 | □□□□□ -2.08 | | |
| HES3 | Q5TGS1 | LINC01867-201 | ENST00000435357 | 604 nt | TSL 2 BASIC | 2.06 | □□□□□ -2.08 | | |
| HES3 | Q5TGS1 | AC129850.1-201 | ENST00000436203 | 508 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| HES3 | Q5TGS1 | LINC01052-201 | ENST00000437777 | 496 nt | TSL 3 BASIC | 2.06 | □□□□□ -2.08 | | |
| HES3 | Q5TGS1 | AF127577.1-201 | ENST00000446301 | 562 nt | TSL 3 BASIC | 2.06 | □□□□□ -2.08 | | |
| HES3 | Q5TGS1 | PCCA-AS1-203 | ENST00000455958 | 356 nt | TSL 3 BASIC | 2.06 | □□□□□ -2.08 | | |
| HES3 | Q5TGS1 | C1GALT1P2-201 | ENST00000510813 | 1104 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| HES3 | Q5TGS1 | LINC00824-201 | ENST00000517583 | 805 nt | TSL 5 BASIC | 2.06 | □□□□□ -2.08 | | |
| HES3 | Q5TGS1 | HMGB1P41-201 | ENST00000520234 | 440 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| HES3 | Q5TGS1 | AC004943.1-202 | ENST00000558618 | 503 nt | TSL 3 BASIC | 2.06 | □□□□□ -2.08 | | |
| HES3 | Q5TGS1 | AC009093.3-203 | ENST00000565800 | 121 nt | TSL 2 BASIC | 2.06 | □□□□□ -2.08 | | |
| HES3 | Q5TGS1 | AMZ2P1-203 | ENST00000565833 | 850 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| HES3 | Q5TGS1 | MIR5194-201 | ENST00000582634 | 120 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| HES3 | Q5TGS1 | AP005380.1-201 | ENST00000584896 | 547 nt | TSL 4 BASIC | 2.06 | □□□□□ -2.08 | | |
| HES3 | Q5TGS1 | AC026741.1-201 | ENST00000605892 | 482 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| HES3 | Q5TGS1 | AC024560.3-201 | ENST00000608482 | 349 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| HES3 | Q5TGS1 | MIR6845-201 | ENST00000613182 | 61 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| HES3 | Q5TGS1 | AC025588.4-201 | ENST00000615802 | 908 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| HES3 | Q5TGS1 | VN1R7P-201 | ENST00000619242 | 903 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| HES3 | Q5TGS1 | AC009831.4-201 | ENST00000620744 | 325 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| HES3 | Q5TGS1 | AC091948.2-201 | ENST00000636510 | 279 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| HES3 | Q5TGS1 | AL163152.1-201 | ENST00000642001 | 374 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| HES3 | Q5TGS1 | XPO4-202 | ENST00000400602 | 9884 nt | APPRIS ALT1 TSL 5 BASIC | 2.06 | □□□□□ -2.08 | | |
| HES3 | Q5TGS1 | SENP7-206 | ENST00000394094 | 4703 nt | APPRIS ALT2 TSL 1 (best) BASIC | 2.06 | □□□□□ -2.08 | | |
| HES3 | Q5TGS1 | ANKRD62P1-201 | ENST00000434304 | 1623 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| HES3 | Q5TGS1 | SAGE1-202 | ENST00000370709 | 2879 nt | APPRIS P2 TSL 5 BASIC | 2.05 | □□□□□ -2.08 | | |
| HES3 | Q5TGS1 | SDAD1P2-201 | ENST00000441308 | 2028 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| HES3 | Q5TGS1 | FRG1BP-201 | ENST00000278882 | 761 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| HES3 | Q5TGS1 | RNU1-17P-201 | ENST00000363022 | 152 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| HES3 | Q5TGS1 | SNORA25.6-201 | ENST00000364121 | 118 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| HES3 | Q5TGS1 | RNU6-270P-201 | ENST00000364131 | 105 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| HES3 | Q5TGS1 | RN7SKP226-201 | ENST00000364912 | 300 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| HES3 | Q5TGS1 | RNU1-51P-201 | ENST00000365345 | 176 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| HES3 | Q5TGS1 | RNU6-468P-201 | ENST00000384003 | 109 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| HES3 | Q5TGS1 | MIR144-201 | ENST00000384886 | 86 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| HES3 | Q5TGS1 | MIR627-201 | ENST00000384979 | 97 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| HES3 | Q5TGS1 | RNA5SP213-201 | ENST00000391031 | 106 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| HES3 | Q5TGS1 | AL513475.1-201 | ENST00000406602 | 315 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| HES3 | Q5TGS1 | AC019178.2-201 | ENST00000423595 | 505 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| HES3 | Q5TGS1 | AF212831.1-201 | ENST00000430064 | 377 nt | TSL 3 BASIC | 2.05 | □□□□□ -2.08 | | |
| HES3 | Q5TGS1 | LINC02532-205 | ENST00000430094 | 628 nt | TSL 5 BASIC | 2.05 | □□□□□ -2.08 | | |
| HES3 | Q5TGS1 | AC090774.1-201 | ENST00000435925 | 246 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| HES3 | Q5TGS1 | AL714022.1-201 | ENST00000439897 | 151 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| HES3 | Q5TGS1 | LAMTOR5P1-201 | ENST00000444290 | 270 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| HES3 | Q5TGS1 | VN1R10P-201 | ENST00000447106 | 875 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| HES3 | Q5TGS1 | LINC01162-201 | ENST00000447262 | 447 nt | TSL 5 BASIC | 2.05 | □□□□□ -2.08 | | |
| HES3 | Q5TGS1 | LINC00395-202 | ENST00000451570 | 415 nt | TSL 3 BASIC | 2.05 | □□□□□ -2.08 | | |
| HES3 | Q5TGS1 | AL391704.1-202 | ENST00000453889 | 874 nt | TSL 3 BASIC | 2.05 | □□□□□ -2.08 | | |
| HES3 | Q5TGS1 | CEP70-205 | ENST00000464035 | 1054 nt | TSL 1 (best) BASIC | 2.05 | □□□□□ -2.08 | | |
| HES3 | Q5TGS1 | AC116337.2-201 | ENST00000477662 | 156 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| HES3 | Q5TGS1 | ODF2L-216 | ENST00000486215 | 311 nt | TSL 2 BASIC | 2.05 | □□□□□ -2.08 | | |
| HES3 | Q5TGS1 | AC113420.1-201 | ENST00000507903 | 571 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| HES3 | Q5TGS1 | AC026780.1-201 | ENST00000512237 | 952 nt | TSL 3 BASIC | 2.05 | □□□□□ -2.08 | | |
| HES3 | Q5TGS1 | DEFB130C-201 | ENST00000528518 | 237 nt | TSL 1 (best) BASIC | 2.05 | □□□□□ -2.08 | | |
| HES3 | Q5TGS1 | C11orf1-204 | ENST00000530214 | 599 nt | TSL 5 BASIC | 2.05 | □□□□□ -2.08 | | |
| HES3 | Q5TGS1 | AC107958.2-201 | ENST00000555396 | 592 nt | TSL 3 BASIC | 2.05 | □□□□□ -2.08 | | |
| HES3 | Q5TGS1 | JKAMP-212 | ENST00000556985 | 592 nt | TSL 2 BASIC | 2.05 | □□□□□ -2.08 | | |
| HES3 | Q5TGS1 | AC044913.1-201 | ENST00000557200 | 430 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| HES3 | Q5TGS1 | AC126323.6-201 | ENST00000561701 | 451 nt | TSL 3 BASIC | 2.05 | □□□□□ -2.08 | | |
| HES3 | Q5TGS1 | ANKRD36BP2-206 | ENST00000575193 | 1245 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| HES3 | Q5TGS1 | AC037487.2-201 | ENST00000581796 | 537 nt | TSL 3 BASIC | 2.05 | □□□□□ -2.08 | | |
| HES3 | Q5TGS1 | RNASEH2B-AS1-202 | ENST00000593369 | 648 nt | TSL 5 BASIC | 2.05 | □□□□□ -2.08 | | |
| HES3 | Q5TGS1 | AL356575.1-201 | ENST00000603008 | 283 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| HES3 | Q5TGS1 | AL136363.1-201 | ENST00000605349 | 337 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| HES3 | Q5TGS1 | AP000238.1-201 | ENST00000608759 | 426 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| HES3 | Q5TGS1 | AL391813.2-201 | ENST00000609113 | 322 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| HES3 | Q5TGS1 | AP005137.2-201 | ENST00000609238 | 400 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| HES3 | Q5TGS1 | AC103710.1-201 | ENST00000610003 | 901 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| HES3 | Q5TGS1 | AC140725.3-201 | ENST00000616193 | 880 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| HES3 | Q5TGS1 | OR51F1-202 | ENST00000624103 | 939 nt | APPRIS ALT1 BASIC | 2.05 | □□□□□ -2.08 | | |
| HES3 | Q5TGS1 | OXR1-215 | ENST00000531443 | 3599 nt | TSL 5 BASIC | 2.05 | □□□□□ -2.08 | | |
| HES3 | Q5TGS1 | CEP44-203 | ENST00000426172 | 3037 nt | TSL 5 BASIC | 2.04 | □□□□□ -2.08 | | |
| HES3 | Q5TGS1 | ARHGAP5-202 | ENST00000345122 | 9604 nt | APPRIS P3 TSL 5 BASIC | 2.04 | □□□□□ -2.08 | | |
| HES3 | Q5TGS1 | SLCO1B3-201 | ENST00000261196 | 2840 nt | APPRIS P1 TSL 1 (best) BASIC | 2.04 | □□□□□ -2.08 | | |
| HES3 | Q5TGS1 | RNU6-354P-201 | ENST00000383862 | 107 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| HES3 | Q5TGS1 | RNU6-610P-201 | ENST00000384264 | 107 nt | BASIC | 2.04 | □□□□□ -2.08 | | |