| BBS9 | Q3SYG4 | FANCI-202 | ENST00000310775 | 4743 nt | APPRIS ALT2 TSL 1 (best) BASIC | 4.74 | □□□□□ -1.65 | | |
| BBS9 | Q3SYG4 | XPO4-201 | ENST00000255305 | 9921 nt | APPRIS P2 TSL 1 (best) BASIC | 4.74 | □□□□□ -1.65 | | |
| BBS9 | Q3SYG4 | HERC4-204 | ENST00000395198 | 4445 nt | APPRIS ALT1 TSL 1 (best) BASIC | 4.74 | □□□□□ -1.65 | | |
| BBS9 | Q3SYG4 | KCNU1-201 | ENST00000399881 | 3695 nt | APPRIS P1 TSL 2 BASIC | 4.74 | □□□□□ -1.65 | | |
| BBS9 | Q3SYG4 | MBNL3-201 | ENST00000370839 | 1575 nt | APPRIS ALT1 TSL 1 (best) BASIC | 4.74 | □□□□□ -1.65 | | |
| BBS9 | Q3SYG4 | SPAG5-AS1-202 | ENST00000424210 | 1551 nt | TSL 2 BASIC | 4.74 | □□□□□ -1.65 | | |
| BBS9 | Q3SYG4 | OR56A1-203 | ENST00000641900 | 8448 nt | APPRIS P1 BASIC | 4.74 | □□□□□ -1.65 | | |
| BBS9 | Q3SYG4 | AC026951.1-201 | ENST00000559530 | 2459 nt | BASIC | 4.73 | □□□□□ -1.65 | | |
| BBS9 | Q3SYG4 | DAZ1-205 | ENST00000540248 | 3268 nt | TSL 5 BASIC | 4.73 | □□□□□ -1.65 | | |
| BBS9 | Q3SYG4 | NFIB-203 | ENST00000380934 | 2142 nt | TSL 2 BASIC | 4.73 | □□□□□ -1.65 | | |
| BBS9 | Q3SYG4 | LUZP2-207 | ENST00000533227 | 5016 nt | TSL 1 (best) BASIC | 4.73 | □□□□□ -1.65 | | |
| BBS9 | Q3SYG4 | RNU6-562P-201 | ENST00000362731 | 107 nt | BASIC | 4.73 | □□□□□ -1.65 | | |
| BBS9 | Q3SYG4 | SNORD3E-201 | ENST00000362899 | 217 nt | BASIC | 4.73 | □□□□□ -1.65 | | |
| BBS9 | Q3SYG4 | RN7SKP115-201 | ENST00000363177 | 317 nt | BASIC | 4.73 | □□□□□ -1.65 | | |
| BBS9 | Q3SYG4 | RNU6-1074P-201 | ENST00000383995 | 104 nt | BASIC | 4.73 | □□□□□ -1.65 | | |
| BBS9 | Q3SYG4 | SNORA75B-201 | ENST00000384053 | 137 nt | BASIC | 4.73 | □□□□□ -1.65 | | |
| BBS9 | Q3SYG4 | RNU6-14P-201 | ENST00000384630 | 106 nt | BASIC | 4.73 | □□□□□ -1.65 | | |
| BBS9 | Q3SYG4 | RNU6-328P-201 | ENST00000390887 | 106 nt | BASIC | 4.73 | □□□□□ -1.65 | | |
| BBS9 | Q3SYG4 | NT5C3A-205 | ENST00000409467 | 1032 nt | APPRIS ALT1 TSL 5 BASIC | 4.73 | □□□□□ -1.65 | | |
| BBS9 | Q3SYG4 | RNU4-25P-201 | ENST00000410569 | 230 nt | BASIC | 4.73 | □□□□□ -1.65 | | |
| BBS9 | Q3SYG4 | RPL21P109-201 | ENST00000422213 | 475 nt | BASIC | 4.73 | □□□□□ -1.65 | | |
| BBS9 | Q3SYG4 | AC018865.2-201 | ENST00000423631 | 129 nt | BASIC | 4.73 | □□□□□ -1.65 | | |
| BBS9 | Q3SYG4 | FAR2P4-202 | ENST00000425399 | 584 nt | BASIC | 4.73 | □□□□□ -1.65 | | |
| BBS9 | Q3SYG4 | UTS2B-203 | ENST00000427544 | 676 nt | APPRIS P1 TSL 1 (best) BASIC | 4.73 | □□□□□ -1.65 | | |
| BBS9 | Q3SYG4 | AC092164.1-202 | ENST00000428036 | 486 nt | TSL 3 BASIC | 4.73 | □□□□□ -1.65 | | |
| BBS9 | Q3SYG4 | AC092813.2-201 | ENST00000434540 | 399 nt | TSL 3 BASIC | 4.73 | □□□□□ -1.65 | | |
| BBS9 | Q3SYG4 | AC012442.1-201 | ENST00000436885 | 529 nt | TSL 4 BASIC | 4.73 | □□□□□ -1.65 | | |
| BBS9 | Q3SYG4 | RPL7P28-201 | ENST00000437739 | 740 nt | BASIC | 4.73 | □□□□□ -1.65 | | |
| BBS9 | Q3SYG4 | AL731563.1-201 | ENST00000442202 | 214 nt | BASIC | 4.73 | □□□□□ -1.65 | | |
| BBS9 | Q3SYG4 | AL080313.2-201 | ENST00000456440 | 489 nt | TSL 3 BASIC | 4.73 | □□□□□ -1.65 | | |
| BBS9 | Q3SYG4 | AC022445.1-201 | ENST00000457499 | 408 nt | TSL 3 BASIC | 4.73 | □□□□□ -1.65 | | |
| BBS9 | Q3SYG4 | RN7SL817P-201 | ENST00000480777 | 288 nt | BASIC | 4.73 | □□□□□ -1.65 | | |
| BBS9 | Q3SYG4 | RN7SL808P-201 | ENST00000496066 | 299 nt | BASIC | 4.73 | □□□□□ -1.65 | | |
| BBS9 | Q3SYG4 | AC025741.1-201 | ENST00000506100 | 544 nt | TSL 4 BASIC | 4.73 | □□□□□ -1.65 | | |
| BBS9 | Q3SYG4 | AL359273.1-203 | ENST00000506295 | 602 nt | TSL 1 (best) BASIC | 4.73 | □□□□□ -1.65 | | |
| BBS9 | Q3SYG4 | BMPR1B-AS1-201 | ENST00000510795 | 511 nt | TSL 3 BASIC | 4.73 | □□□□□ -1.65 | | |
| BBS9 | Q3SYG4 | MEPE-206 | ENST00000511670 | 550 nt | TSL 4 BASIC | 4.73 | □□□□□ -1.65 | | |
| BBS9 | Q3SYG4 | GMPSP1-201 | ENST00000514075 | 579 nt | BASIC | 4.73 | □□□□□ -1.65 | | |
| BBS9 | Q3SYG4 | SNORA25.10-201 | ENST00000515926 | 124 nt | BASIC | 4.73 | □□□□□ -1.65 | | |
| BBS9 | Q3SYG4 | RNU6-1213P-201 | ENST00000517075 | 94 nt | BASIC | 4.73 | □□□□□ -1.65 | | |
| BBS9 | Q3SYG4 | SNORA31.22-201 | ENST00000517204 | 135 nt | BASIC | 4.73 | □□□□□ -1.65 | | |
| BBS9 | Q3SYG4 | AC010653.1-201 | ENST00000571108 | 881 nt | BASIC | 4.73 | □□□□□ -1.65 | | |
| BBS9 | Q3SYG4 | AC022706.1-202 | ENST00000585387 | 540 nt | TSL 3 BASIC | 4.73 | □□□□□ -1.65 | | |
| BBS9 | Q3SYG4 | FAM157A-202 | ENST00000615155 | 405 nt | BASIC | 4.73 | □□□□□ -1.65 | | |
| BBS9 | Q3SYG4 | C7orf77-201 | ENST00000616258 | 548 nt | APPRIS P1 TSL 1 (best) BASIC | 4.73 | □□□□□ -1.65 | | |
| BBS9 | Q3SYG4 | PISRT1.1-201 | ENST00000616930 | 107 nt | BASIC | 4.73 | □□□□□ -1.65 | | |
| BBS9 | Q3SYG4 | PLCE1P1-201 | ENST00000622094 | 305 nt | BASIC | 4.73 | □□□□□ -1.65 | | |
| BBS9 | Q3SYG4 | AC091905.4-201 | ENST00000623432 | 202 nt | BASIC | 4.73 | □□□□□ -1.65 | | |
| BBS9 | Q3SYG4 | AC139769.1-204 | ENST00000472297 | 1931 nt | BASIC | 4.73 | □□□□□ -1.65 | | |
| BBS9 | Q3SYG4 | PREPL-205 | ENST00000409411 | 4725 nt | TSL 1 (best) BASIC | 4.73 | □□□□□ -1.65 | | |
| BBS9 | Q3SYG4 | SAMSN1-201 | ENST00000285670 | 2185 nt | TSL 1 (best) BASIC | 4.72 | □□□□□ -1.65 | | |
| BBS9 | Q3SYG4 | CYP3A4-201 | ENST00000336411 | 2153 nt | APPRIS P1 TSL 1 (best) BASIC | 4.72 | □□□□□ -1.65 | | |
| BBS9 | Q3SYG4 | AL139811.1-201 | ENST00000424779 | 2299 nt | BASIC | 4.72 | □□□□□ -1.65 | | |
| BBS9 | Q3SYG4 | ZNF807-201 | ENST00000328088 | 1707 nt | BASIC | 4.72 | □□□□□ -1.65 | | |
| BBS9 | Q3SYG4 | UTP20-201 | ENST00000261637 | 9025 nt | APPRIS P1 TSL 1 (best) BASIC | 4.72 | □□□□□ -1.65 | | |
| BBS9 | Q3SYG4 | CHL1-216 | ENST00000620033 | 7311 nt | TSL 1 (best) BASIC | 4.72 | □□□□□ -1.65 | | |
| BBS9 | Q3SYG4 | LARP4-202 | ENST00000347328 | 3621 nt | TSL 1 (best) BASIC | 4.72 | □□□□□ -1.65 | | |
| BBS9 | Q3SYG4 | HIST1H2BD-201 | ENST00000289316 | 789 nt | APPRIS P1 TSL 1 (best) BASIC | 4.72 | □□□□□ -1.65 | | |
| BBS9 | Q3SYG4 | S100A12-201 | ENST00000368737 | 518 nt | APPRIS P1 TSL 1 (best) BASIC | 4.72 | □□□□□ -1.65 | | |
| BBS9 | Q3SYG4 | RNU6-128P-201 | ENST00000383976 | 107 nt | BASIC | 4.72 | □□□□□ -1.65 | | |
| BBS9 | Q3SYG4 | RNU6-76P-201 | ENST00000384060 | 104 nt | BASIC | 4.72 | □□□□□ -1.65 | | |
| BBS9 | Q3SYG4 | RNA5SP372-201 | ENST00000390836 | 115 nt | BASIC | 4.72 | □□□□□ -1.65 | | |
| BBS9 | Q3SYG4 | AL645733.1-201 | ENST00000402250 | 217 nt | BASIC | 4.72 | □□□□□ -1.65 | | |
| BBS9 | Q3SYG4 | AL133270.1-201 | ENST00000402635 | 279 nt | BASIC | 4.72 | □□□□□ -1.65 | | |
| BBS9 | Q3SYG4 | HSPE1P8-201 | ENST00000406997 | 288 nt | BASIC | 4.72 | □□□□□ -1.65 | | |
| BBS9 | Q3SYG4 | Y_RNA.618-201 | ENST00000410949 | 107 nt | BASIC | 4.72 | □□□□□ -1.65 | | |
| BBS9 | Q3SYG4 | AC017101.1-201 | ENST00000453665 | 571 nt | TSL 4 BASIC | 4.72 | □□□□□ -1.65 | | |
| BBS9 | Q3SYG4 | RPS5P7-201 | ENST00000456664 | 608 nt | BASIC | 4.72 | □□□□□ -1.65 | | |
| BBS9 | Q3SYG4 | AC099499.1-201 | ENST00000505040 | 558 nt | TSL 3 BASIC | 4.72 | □□□□□ -1.65 | | |
| BBS9 | Q3SYG4 | AC097473.1-201 | ENST00000508142 | 408 nt | BASIC | 4.72 | □□□□□ -1.65 | | |
| BBS9 | Q3SYG4 | AC079160.1-201 | ENST00000513489 | 739 nt | TSL 1 (best) BASIC | 4.72 | □□□□□ -1.65 | | |
| BBS9 | Q3SYG4 | RNA5SP446-201 | ENST00000515955 | 82 nt | BASIC | 4.72 | □□□□□ -1.65 | | |
| BBS9 | Q3SYG4 | RNU2-69P-201 | ENST00000516061 | 100 nt | BASIC | 4.72 | □□□□□ -1.65 | | |
| BBS9 | Q3SYG4 | RNU6-764P-201 | ENST00000516396 | 105 nt | BASIC | 4.72 | □□□□□ -1.65 | | |
| BBS9 | Q3SYG4 | AC084083.1-201 | ENST00000526947 | 722 nt | TSL 5 BASIC | 4.72 | □□□□□ -1.65 | | |
| BBS9 | Q3SYG4 | AC023442.1-201 | ENST00000531247 | 422 nt | BASIC | 4.72 | □□□□□ -1.65 | | |
| BBS9 | Q3SYG4 | AC008269.2-201 | ENST00000561915 | 1105 nt | BASIC | 4.72 | □□□□□ -1.65 | | |
| BBS9 | Q3SYG4 | AC090772.1-201 | ENST00000583782 | 507 nt | TSL 5 BASIC | 4.72 | □□□□□ -1.65 | | |
| BBS9 | Q3SYG4 | AC091178.1-203 | ENST00000584586 | 279 nt | BASIC | 4.72 | □□□□□ -1.65 | | |
| BBS9 | Q3SYG4 | MIR5692C1-201 | ENST00000585309 | 91 nt | BASIC | 4.72 | □□□□□ -1.65 | | |
| BBS9 | Q3SYG4 | AP001172.2-201 | ENST00000602454 | 467 nt | TSL 5 BASIC | 4.72 | □□□□□ -1.65 | | |
| BBS9 | Q3SYG4 | ATP5A1P2-202 | ENST00000616464 | 443 nt | BASIC | 4.72 | □□□□□ -1.65 | | |
| BBS9 | Q3SYG4 | AL353748.2-201 | ENST00000622148 | 471 nt | BASIC | 4.72 | □□□□□ -1.65 | | |
| BBS9 | Q3SYG4 | PROX1-AS1-244 | ENST00000630355 | 599 nt | TSL 5 BASIC | 4.72 | □□□□□ -1.65 | | |
| BBS9 | Q3SYG4 | KYNU-201 | ENST00000264170 | 15316 nt | APPRIS P1 TSL 1 (best) BASIC | 4.72 | □□□□□ -1.65 | | |
| BBS9 | Q3SYG4 | ZFRP1-201 | ENST00000457579 | 2970 nt | BASIC | 4.72 | □□□□□ -1.65 | | |
| BBS9 | Q3SYG4 | AC104662.3-202 | ENST00000507794 | 4055 nt | TSL 2 BASIC | 4.72 | □□□□□ -1.65 | | |
| BBS9 | Q3SYG4 | PCDH15-203 | ENST00000373955 | 4230 nt | TSL 1 (best) BASIC | 4.72 | □□□□□ -1.65 | | |
| BBS9 | Q3SYG4 | AL592437.2-201 | ENST00000421655 | 2434 nt | BASIC | 4.72 | □□□□□ -1.65 | | |
| BBS9 | Q3SYG4 | THEMIS-204 | ENST00000537166 | 3830 nt | APPRIS ALT2 TSL 2 BASIC | 4.71 | □□□□□ -1.65 | | |
| BBS9 | Q3SYG4 | KERA-201 | ENST00000266719 | 2162 nt | APPRIS P1 TSL 1 (best) BASIC | 4.71 | □□□□□ -1.65 | | |
| BBS9 | Q3SYG4 | EEF1A1-211 | ENST00000615060 | 3508 nt | TSL 5 BASIC | 4.71 | □□□□□ -1.65 | | |
| BBS9 | Q3SYG4 | AC090337.1-201 | ENST00000579651 | 2074 nt | BASIC | 4.71 | □□□□□ -1.65 | | |
| BBS9 | Q3SYG4 | IQGAP2-204 | ENST00000502745 | 3404 nt | TSL 2 BASIC | 4.71 | □□□□□ -1.65 | | |
| BBS9 | Q3SYG4 | AKAP11-201 | ENST00000025301 | 9920 nt | APPRIS P1 TSL 1 (best) BASIC | 4.71 | □□□□□ -1.66 | | |
| BBS9 | Q3SYG4 | SLC30A6-205 | ENST00000435660 | 4776 nt | TSL 1 (best) BASIC | 4.71 | □□□□□ -1.66 | | |
| BBS9 | Q3SYG4 | CP-201 | ENST00000264613 | 4676 nt | APPRIS P1 TSL 1 (best) BASIC | 4.71 | □□□□□ -1.66 | | |
| BBS9 | Q3SYG4 | SNORA74A-201 | ENST00000364089 | 198 nt | BASIC | 4.71 | □□□□□ -1.66 | | |
| BBS9 | Q3SYG4 | RNU6-1318P-201 | ENST00000365389 | 103 nt | BASIC | 4.71 | □□□□□ -1.66 | | |
| BBS9 | Q3SYG4 | TSACC-205 | ENST00000368255 | 751 nt | APPRIS P1 TSL 1 (best) BASIC | 4.71 | □□□□□ -1.66 | | |