Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.48□□□□□ -2.17
HIST1H1AQ02539 RNA5SP425-201ENST00000410336 112 ntBASIC1.48□□□□□ -2.17
HIST1H1AQ02539 HMGB1P49-201ENST00000418882 569 ntBASIC1.48□□□□□ -2.17
HIST1H1AQ02539 EIF1AXP1-201ENST00000419267 435 ntBASIC1.48□□□□□ -2.17
HIST1H1AQ02539 AL445685.2-201ENST00000422551 342 ntBASIC1.48□□□□□ -2.17
HIST1H1AQ02539 Z93242.1-201ENST00000427102 353 ntBASIC1.48□□□□□ -2.17
HIST1H1AQ02539 AC012497.1-201ENST00000429392 575 ntBASIC1.48□□□□□ -2.17
HIST1H1AQ02539 AL512844.2-201ENST00000433990 593 ntBASIC1.48□□□□□ -2.17
HIST1H1AQ02539 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC1.48□□□□□ -2.17
HIST1H1AQ02539 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.48□□□□□ -2.17
HIST1H1AQ02539 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.48□□□□□ -2.17
HIST1H1AQ02539 AC093155.1-201ENST00000440164 826 ntBASIC1.48□□□□□ -2.17
HIST1H1AQ02539 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.48□□□□□ -2.17
HIST1H1AQ02539 AC096638.1-201ENST00000444678 216 ntBASIC1.48□□□□□ -2.17
HIST1H1AQ02539 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC1.48□□□□□ -2.17
HIST1H1AQ02539 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.48□□□□□ -2.17
HIST1H1AQ02539 snoU109.1-201ENST00000459339 135 ntBASIC1.48□□□□□ -2.17
HIST1H1AQ02539 RPL9P6-201ENST00000492764 598 ntBASIC1.48□□□□□ -2.17
HIST1H1AQ02539 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.48□□□□□ -2.17
HIST1H1AQ02539 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC1.48□□□□□ -2.17
HIST1H1AQ02539 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.48□□□□□ -2.17
HIST1H1AQ02539 RNU5A-7P-201ENST00000515979 116 ntBASIC1.48□□□□□ -2.17
HIST1H1AQ02539 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.48□□□□□ -2.17
HIST1H1AQ02539 IGKV3-31-201ENST00000523109 329 ntBASIC1.48□□□□□ -2.17
HIST1H1AQ02539 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC1.48□□□□□ -2.17
HIST1H1AQ02539 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
HIST1H1AQ02539 AC118273.2-201ENST00000532092 465 ntBASIC1.48□□□□□ -2.17
HIST1H1AQ02539 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC1.48□□□□□ -2.17
HIST1H1AQ02539 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC1.48□□□□□ -2.17
HIST1H1AQ02539 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC1.48□□□□□ -2.17
HIST1H1AQ02539 AC105224.1-201ENST00000587055 421 ntBASIC1.48□□□□□ -2.17
HIST1H1AQ02539 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC1.48□□□□□ -2.17
HIST1H1AQ02539 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC1.48□□□□□ -2.17
HIST1H1AQ02539 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC1.48□□□□□ -2.17
HIST1H1AQ02539 AC079610.2-201ENST00000604818 690 ntBASIC1.48□□□□□ -2.17
HIST1H1AQ02539 AL137246.1-201ENST00000607072 977 ntBASIC1.48□□□□□ -2.17
HIST1H1AQ02539 AL356266.1-201ENST00000623311 483 ntBASIC1.48□□□□□ -2.17
HIST1H1AQ02539 AC244517.12-201ENST00000623581 663 ntBASIC1.48□□□□□ -2.17
HIST1H1AQ02539 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC1.48□□□□□ -2.17
HIST1H1AQ02539 MIR7157-201ENST00000635801 60 ntBASIC1.48□□□□□ -2.17
HIST1H1AQ02539 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
HIST1H1AQ02539 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
HIST1H1AQ02539 AK9-203ENST00000368948 2478 ntTSL 5 BASIC1.47□□□□□ -2.17
HIST1H1AQ02539 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
HIST1H1AQ02539 ELF2P3-201ENST00000445099 1506 ntBASIC1.47□□□□□ -2.17
HIST1H1AQ02539 NUP58P1-201ENST00000502546 1738 ntBASIC1.47□□□□□ -2.17
HIST1H1AQ02539 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
HIST1H1AQ02539 RNU6-1083P-201ENST00000384022 107 ntBASIC1.47□□□□□ -2.17
HIST1H1AQ02539 RN7SKP158-201ENST00000410453 326 ntBASIC1.47□□□□□ -2.17
HIST1H1AQ02539 RPS20P15-201ENST00000412792 311 ntBASIC1.47□□□□□ -2.17
HIST1H1AQ02539 SPA17P1-201ENST00000416656 452 ntBASIC1.47□□□□□ -2.17
HIST1H1AQ02539 Z98742.3-201ENST00000418637 326 ntBASIC1.47□□□□□ -2.17
HIST1H1AQ02539 AL590383.1-201ENST00000428602 75 ntBASIC1.47□□□□□ -2.17
HIST1H1AQ02539 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC1.47□□□□□ -2.17
HIST1H1AQ02539 AL592447.1-201ENST00000447592 540 ntBASIC1.47□□□□□ -2.17
HIST1H1AQ02539 RPL23AP3-201ENST00000453844 468 ntBASIC1.47□□□□□ -2.17
HIST1H1AQ02539 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC1.47□□□□□ -2.17
HIST1H1AQ02539 AC114786.4-201ENST00000508771 728 ntBASIC1.47□□□□□ -2.17
HIST1H1AQ02539 AC093281.2-201ENST00000510153 597 ntBASIC1.47□□□□□ -2.17
HIST1H1AQ02539 AC114797.1-201ENST00000514003 728 ntBASIC1.47□□□□□ -2.17
HIST1H1AQ02539 MIR892C-201ENST00000516410 77 ntBASIC1.47□□□□□ -2.17
HIST1H1AQ02539 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC1.47□□□□□ -2.17
HIST1H1AQ02539 MTCYBP27-201ENST00000555160 670 ntBASIC1.47□□□□□ -2.17
HIST1H1AQ02539 AC087465.1-201ENST00000560574 245 ntBASIC1.47□□□□□ -2.17
HIST1H1AQ02539 AC074051.3-201ENST00000570238 358 ntBASIC1.47□□□□□ -2.17
HIST1H1AQ02539 MIR4299-201ENST00000577899 72 ntBASIC1.47□□□□□ -2.17
HIST1H1AQ02539 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.47□□□□□ -2.17
HIST1H1AQ02539 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC1.47□□□□□ -2.17
HIST1H1AQ02539 AC106052.1-201ENST00000608029 497 ntBASIC1.47□□□□□ -2.17
HIST1H1AQ02539 AP001521.1-201ENST00000609150 300 ntBASIC1.47□□□□□ -2.17
HIST1H1AQ02539 MIR6852-201ENST00000621699 66 ntBASIC1.47□□□□□ -2.17
HIST1H1AQ02539 AC073592.7-201ENST00000623659 507 ntBASIC1.47□□□□□ -2.17
HIST1H1AQ02539 OR1S1-201ENST00000624470 978 ntBASIC1.47□□□□□ -2.17
HIST1H1AQ02539 AC064859.1-201ENST00000624741 174 ntBASIC1.47□□□□□ -2.17
HIST1H1AQ02539 MIR219B-201ENST00000637023 88 ntBASIC1.47□□□□□ -2.17
HIST1H1AQ02539 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.47□□□□□ -2.17
HIST1H1AQ02539 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
HIST1H1AQ02539 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
HIST1H1AQ02539 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
HIST1H1AQ02539 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
HIST1H1AQ02539 RNU2-20P-201ENST00000410425 191 ntBASIC1.46□□□□□ -2.18
HIST1H1AQ02539 DPH3P2-201ENST00000422618 250 ntBASIC1.46□□□□□ -2.18
HIST1H1AQ02539 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.46□□□□□ -2.18
HIST1H1AQ02539 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.46□□□□□ -2.18
HIST1H1AQ02539 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.46□□□□□ -2.18
HIST1H1AQ02539 MTCYBP45-201ENST00000435243 565 ntBASIC1.46□□□□□ -2.18
HIST1H1AQ02539 IFNA20P-201ENST00000436840 528 ntBASIC1.46□□□□□ -2.18
HIST1H1AQ02539 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.46□□□□□ -2.18
HIST1H1AQ02539 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.46□□□□□ -2.18
HIST1H1AQ02539 BMI1P1-201ENST00000445879 941 ntBASIC1.46□□□□□ -2.18
HIST1H1AQ02539 RPL21P134-201ENST00000453468 483 ntBASIC1.46□□□□□ -2.18
HIST1H1AQ02539 PABPC1P3-201ENST00000469174 459 ntBASIC1.46□□□□□ -2.18
HIST1H1AQ02539 AC107032.1-201ENST00000485945 480 ntBASIC1.46□□□□□ -2.18
HIST1H1AQ02539 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC1.46□□□□□ -2.18
HIST1H1AQ02539 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.46□□□□□ -2.18
HIST1H1AQ02539 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC1.46□□□□□ -2.18
HIST1H1AQ02539 AC010486.1-201ENST00000511793 424 ntBASIC1.46□□□□□ -2.18
HIST1H1AQ02539 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.46□□□□□ -2.18
HIST1H1AQ02539 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.46□□□□□ -2.18
HIST1H1AQ02539 AL512310.1-201ENST00000548639 172 ntBASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 148.4 ms