Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 RPL23AP63-201ENST00000498752 471 ntBASIC1.17□□□□□ -2.22
RPS28P62857 OR7H2P-201ENST00000513483 306 ntBASIC1.17□□□□□ -2.22
RPS28P62857 AC093853.1-201ENST00000515689 483 ntBASIC1.17□□□□□ -2.22
RPS28P62857 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC1.17□□□□□ -2.22
RPS28P62857 RNU6-362P-201ENST00000516736 90 ntBASIC1.17□□□□□ -2.22
RPS28P62857 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC1.17□□□□□ -2.22
RPS28P62857 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC1.17□□□□□ -2.22
RPS28P62857 EEF1A1P37-201ENST00000522748 715 ntBASIC1.17□□□□□ -2.22
RPS28P62857 AP005435.4-201ENST00000529514 284 ntBASIC1.17□□□□□ -2.22
RPS28P62857 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.17□□□□□ -2.22
RPS28P62857 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC1.17□□□□□ -2.22
RPS28P62857 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC1.17□□□□□ -2.22
RPS28P62857 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC1.17□□□□□ -2.22
RPS28P62857 PARP1P2-201ENST00000556806 195 ntBASIC1.17□□□□□ -2.22
RPS28P62857 AC023825.1-201ENST00000566704 1030 ntBASIC1.17□□□□□ -2.22
RPS28P62857 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC1.17□□□□□ -2.22
RPS28P62857 AC002545.1-201ENST00000592511 181 ntBASIC1.17□□□□□ -2.22
RPS28P62857 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC1.17□□□□□ -2.22
RPS28P62857 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC1.17□□□□□ -2.22
RPS28P62857 BNIP3P11-201ENST00000603878 563 ntBASIC1.17□□□□□ -2.22
RPS28P62857 PRR13P7-201ENST00000605538 430 ntBASIC1.17□□□□□ -2.22
RPS28P62857 AL161616.1-201ENST00000611867 286 ntBASIC1.17□□□□□ -2.22
RPS28P62857 AC024941.1-201ENST00000612250 334 ntBASIC1.17□□□□□ -2.22
RPS28P62857 AC024257.5-201ENST00000612739 531 ntBASIC1.17□□□□□ -2.22
RPS28P62857 AL158801.5-201ENST00000623123 465 ntBASIC1.17□□□□□ -2.22
RPS28P62857 AL118508.4-201ENST00000624142 1176 ntBASIC1.17□□□□□ -2.22
RPS28P62857 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC1.17□□□□□ -2.22
RPS28P62857 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.17□□□□□ -2.22
RPS28P62857 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
RPS28P62857 RNA5SP509-201ENST00000364577 119 ntBASIC1.16□□□□□ -2.22
RPS28P62857 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.16□□□□□ -2.22
RPS28P62857 MIR30A-201ENST00000385092 71 ntBASIC1.16□□□□□ -2.22
RPS28P62857 BTF3P8-201ENST00000414577 526 ntBASIC1.16□□□□□ -2.22
RPS28P62857 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
RPS28P62857 EIF4EP2-201ENST00000422816 654 ntBASIC1.16□□□□□ -2.22
RPS28P62857 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC1.16□□□□□ -2.22
RPS28P62857 ATP5JP1-201ENST00000431631 322 ntBASIC1.16□□□□□ -2.22
RPS28P62857 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
RPS28P62857 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC1.16□□□□□ -2.22
RPS28P62857 AC073264.2-201ENST00000448886 166 ntBASIC1.16□□□□□ -2.22
RPS28P62857 HSPE1P24-201ENST00000450782 238 ntBASIC1.16□□□□□ -2.22
RPS28P62857 RBMY2UP-201ENST00000453474 324 ntBASIC1.16□□□□□ -2.22
RPS28P62857 AC244505.3-201ENST00000454598 187 ntBASIC1.16□□□□□ -2.22
RPS28P62857 HMGN2P23-201ENST00000456759 269 ntBASIC1.16□□□□□ -2.22
RPS28P62857 RPS20P20-201ENST00000460498 340 ntBASIC1.16□□□□□ -2.22
RPS28P62857 MTCO3P42-201ENST00000509488 518 ntBASIC1.16□□□□□ -2.22
RPS28P62857 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC1.16□□□□□ -2.22
RPS28P62857 MTCO3P39-201ENST00000514812 518 ntBASIC1.16□□□□□ -2.22
RPS28P62857 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.16□□□□□ -2.22
RPS28P62857 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC1.16□□□□□ -2.22
RPS28P62857 IMMP1LP2-201ENST00000552954 492 ntBASIC1.16□□□□□ -2.22
RPS28P62857 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
RPS28P62857 NIFKP8-201ENST00000560500 874 ntBASIC1.16□□□□□ -2.22
RPS28P62857 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC1.16□□□□□ -2.22
RPS28P62857 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC1.16□□□□□ -2.22
RPS28P62857 AC005261.5-201ENST00000596280 355 ntBASIC1.16□□□□□ -2.22
RPS28P62857 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC1.16□□□□□ -2.22
RPS28P62857 KATNBL1P1-201ENST00000605192 748 ntBASIC1.16□□□□□ -2.22
RPS28P62857 ARF4P1-201ENST00000605447 541 ntBASIC1.16□□□□□ -2.22
RPS28P62857 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC1.16□□□□□ -2.22
RPS28P62857 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.16□□□□□ -2.22
RPS28P62857 AC114781.5-201ENST00000615297 108 ntBASIC1.16□□□□□ -2.22
RPS28P62857 AC099842.1-201ENST00000619919 596 ntBASIC1.16□□□□□ -2.22
RPS28P62857 AC009831.4-201ENST00000620744 325 ntBASIC1.16□□□□□ -2.22
RPS28P62857 MIR4275-201ENST00000636486 87 ntBASIC1.16□□□□□ -2.22
RPS28P62857 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1.16□□□□□ -2.22
RPS28P62857 MTND5P10-201ENST00000603719 1809 ntBASIC1.16□□□□□ -2.22
RPS28P62857 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
RPS28P62857 Z75746.1-201ENST00000440243 2080 ntBASIC1.16□□□□□ -2.22
RPS28P62857 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.16□□□□□ -2.22
RPS28P62857 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC1.15□□□□□ -2.23
RPS28P62857 SNORD115-3-201ENST00000363100 82 ntBASIC1.15□□□□□ -2.23
RPS28P62857 RNA5-8SP7-201ENST00000363443 155 ntBASIC1.15□□□□□ -2.23
RPS28P62857 RNA5SP51-201ENST00000364750 119 ntBASIC1.15□□□□□ -2.23
RPS28P62857 RNA5SP363-201ENST00000365072 115 ntBASIC1.15□□□□□ -2.23
RPS28P62857 RNU6-619P-201ENST00000365146 108 ntBASIC1.15□□□□□ -2.23
RPS28P62857 MIR218-2-201ENST00000385006 110 ntBASIC1.15□□□□□ -2.23
RPS28P62857 AC099535.1-201ENST00000408928 371 ntBASIC1.15□□□□□ -2.23
RPS28P62857 RN7SKP278-201ENST00000410504 342 ntBASIC1.15□□□□□ -2.23
RPS28P62857 USP9YP19-201ENST00000412165 485 ntBASIC1.15□□□□□ -2.23
RPS28P62857 MTCYBP38-201ENST00000417160 1123 ntBASIC1.15□□□□□ -2.23
RPS28P62857 USP9YP13-201ENST00000417797 480 ntBASIC1.15□□□□□ -2.23
RPS28P62857 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
RPS28P62857 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC1.15□□□□□ -2.23
RPS28P62857 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC1.15□□□□□ -2.23
RPS28P62857 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC1.15□□□□□ -2.23
RPS28P62857 AL161788.1-201ENST00000441805 169 ntBASIC1.15□□□□□ -2.23
RPS28P62857 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.15□□□□□ -2.23
RPS28P62857 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC1.15□□□□□ -2.23
RPS28P62857 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC1.15□□□□□ -2.23
RPS28P62857 AC011276.1-201ENST00000469688 323 ntBASIC1.15□□□□□ -2.23
RPS28P62857 LINC00888-204ENST00000487386 421 ntBASIC1.15□□□□□ -2.23
RPS28P62857 AC114801.2-201ENST00000503825 781 ntBASIC1.15□□□□□ -2.23
RPS28P62857 NDUFB5P1-201ENST00000508134 564 ntBASIC1.15□□□□□ -2.23
RPS28P62857 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC1.15□□□□□ -2.23
RPS28P62857 AC010374.2-201ENST00000512933 535 ntBASIC1.15□□□□□ -2.23
RPS28P62857 SNORA25.11-201ENST00000515935 105 ntBASIC1.15□□□□□ -2.23
RPS28P62857 RN7SKP18-201ENST00000516005 275 ntBASIC1.15□□□□□ -2.23
RPS28P62857 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC1.15□□□□□ -2.23
RPS28P62857 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms