Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 COTL1P1-201ENST00000422309 375 ntBASIC2.81□□□□□ -1.96
RPS4XP62701 RPS27AP14-201ENST00000422868 454 ntBASIC2.81□□□□□ -1.96
RPS4XP62701 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.81□□□□□ -1.96
RPS4XP62701 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.81□□□□□ -1.96
RPS4XP62701 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC2.81□□□□□ -1.96
RPS4XP62701 AC092573.2-201ENST00000434546 243 ntBASIC2.81□□□□□ -1.96
RPS4XP62701 RPL37P21-201ENST00000435890 276 ntBASIC2.81□□□□□ -1.96
RPS4XP62701 MTCO3P45-201ENST00000443036 613 ntBASIC2.81□□□□□ -1.96
RPS4XP62701 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC2.81□□□□□ -1.96
RPS4XP62701 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC2.81□□□□□ -1.96
RPS4XP62701 RNU7-59P-201ENST00000459101 61 ntBASIC2.81□□□□□ -1.96
RPS4XP62701 RPL23AP41-201ENST00000484754 458 ntBASIC2.81□□□□□ -1.96
RPS4XP62701 RPS3AP22-201ENST00000488297 769 ntBASIC2.81□□□□□ -1.96
RPS4XP62701 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.81□□□□□ -1.96
RPS4XP62701 AC006445.2-201ENST00000510061 472 ntBASIC2.81□□□□□ -1.96
RPS4XP62701 MRPS33P3-201ENST00000513456 322 ntBASIC2.81□□□□□ -1.96
RPS4XP62701 RNU6-1256P-201ENST00000516539 103 ntBASIC2.81□□□□□ -1.96
RPS4XP62701 RNU6-1282P-201ENST00000516735 96 ntBASIC2.81□□□□□ -1.96
RPS4XP62701 RNU6-1003P-201ENST00000517099 105 ntBASIC2.81□□□□□ -1.96
RPS4XP62701 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC2.81□□□□□ -1.96
RPS4XP62701 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC2.81□□□□□ -1.96
RPS4XP62701 PCMTD1P2-201ENST00000565017 355 ntBASIC2.81□□□□□ -1.96
RPS4XP62701 AC005951.2-201ENST00000576282 495 ntBASIC2.81□□□□□ -1.96
RPS4XP62701 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC2.81□□□□□ -1.96
RPS4XP62701 LARP7P3-201ENST00000579888 337 ntBASIC2.81□□□□□ -1.96
RPS4XP62701 PRELID3BP8-201ENST00000604148 295 ntBASIC2.81□□□□□ -1.96
RPS4XP62701 CLPTM1LP1-201ENST00000604519 484 ntBASIC2.81□□□□□ -1.96
RPS4XP62701 AC007038.2-201ENST00000608095 740 ntBASIC2.81□□□□□ -1.96
RPS4XP62701 AC079248.2-201ENST00000623779 326 ntBASIC2.81□□□□□ -1.96
RPS4XP62701 AC079416.3-201ENST00000624479 549 ntBASIC2.81□□□□□ -1.96
RPS4XP62701 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC2.81□□□□□ -1.96
RPS4XP62701 SNORA50A-202ENST00000629536 136 ntBASIC2.81□□□□□ -1.96
RPS4XP62701 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
RPS4XP62701 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
RPS4XP62701 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.81□□□□□ -1.96
RPS4XP62701 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
RPS4XP62701 AC005183.1-201ENST00000603687 1979 ntBASIC2.81□□□□□ -1.96
RPS4XP62701 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
RPS4XP62701 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC2.81□□□□□ -1.96
RPS4XP62701 GABRG2-229ENST00000641017 3628 ntBASIC2.8□□□□□ -1.96
RPS4XP62701 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
RPS4XP62701 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
RPS4XP62701 OR1S2-201ENST00000302592 978 ntBASIC2.8□□□□□ -1.96
RPS4XP62701 SNORA14A-201ENST00000364773 135 ntBASIC2.8□□□□□ -1.96
RPS4XP62701 RNU1-140P-201ENST00000365040 165 ntBASIC2.8□□□□□ -1.96
RPS4XP62701 RNU1-39P-201ENST00000383897 165 ntBASIC2.8□□□□□ -1.96
RPS4XP62701 U8.14-201ENST00000390843 143 ntBASIC2.8□□□□□ -1.96
RPS4XP62701 MRPL50P2-201ENST00000416821 482 ntBASIC2.8□□□□□ -1.96
RPS4XP62701 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC2.8□□□□□ -1.96
RPS4XP62701 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC2.8□□□□□ -1.96
RPS4XP62701 UBE2D3P1-201ENST00000436669 444 ntBASIC2.8□□□□□ -1.96
RPS4XP62701 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.8□□□□□ -1.96
RPS4XP62701 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.8□□□□□ -1.96
RPS4XP62701 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC2.8□□□□□ -1.96
RPS4XP62701 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.8□□□□□ -1.96
RPS4XP62701 NANOGNBP1-201ENST00000448444 480 ntBASIC2.8□□□□□ -1.96
RPS4XP62701 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC2.8□□□□□ -1.96
RPS4XP62701 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC2.8□□□□□ -1.96
RPS4XP62701 AL139824.2-201ENST00000458731 1095 ntBASIC2.8□□□□□ -1.96
RPS4XP62701 RN7SL863P-201ENST00000462370 296 ntBASIC2.8□□□□□ -1.96
RPS4XP62701 RPL30P6-201ENST00000475925 342 ntBASIC2.8□□□□□ -1.96
RPS4XP62701 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
RPS4XP62701 AC006445.1-201ENST00000491925 405 ntBASIC2.8□□□□□ -1.96
RPS4XP62701 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
RPS4XP62701 NRON-201ENST00000517270 370 ntBASIC2.8□□□□□ -1.96
RPS4XP62701 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
RPS4XP62701 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.8□□□□□ -1.96
RPS4XP62701 HMGB1P14-201ENST00000557424 591 ntBASIC2.8□□□□□ -1.96
RPS4XP62701 AL845331.3-202ENST00000562856 261 ntBASIC2.8□□□□□ -1.96
RPS4XP62701 ACTR3BP3-201ENST00000565577 979 ntBASIC2.8□□□□□ -1.96
RPS4XP62701 MIR3609-201ENST00000582661 80 ntBASIC2.8□□□□□ -1.96
RPS4XP62701 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.8□□□□□ -1.96
RPS4XP62701 AC068790.3-201ENST00000602988 553 ntBASIC2.8□□□□□ -1.96
RPS4XP62701 MTCYBP22-201ENST00000603788 447 ntBASIC2.8□□□□□ -1.96
RPS4XP62701 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.8□□□□□ -1.96
RPS4XP62701 AC107294.3-201ENST00000609211 526 ntBASIC2.8□□□□□ -1.96
RPS4XP62701 AL355472.4-201ENST00000610233 626 ntBASIC2.8□□□□□ -1.96
RPS4XP62701 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
RPS4XP62701 AC010133.1-201ENST00000615809 842 ntBASIC2.8□□□□□ -1.96
RPS4XP62701 MIR7844-201ENST00000616161 122 ntBASIC2.8□□□□□ -1.96
RPS4XP62701 AC138932.5-201ENST00000617759 563 ntBASIC2.8□□□□□ -1.96
RPS4XP62701 AC026422.1-201ENST00000623961 452 ntBASIC2.8□□□□□ -1.96
RPS4XP62701 AC092192.1-201ENST00000633154 1018 ntBASIC2.8□□□□□ -1.96
RPS4XP62701 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC2.8□□□□□ -1.96
RPS4XP62701 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
RPS4XP62701 AC073325.2-201ENST00000339545 159 ntBASIC2.79□□□□□ -1.96
RPS4XP62701 RNU6-501P-201ENST00000364072 100 ntBASIC2.79□□□□□ -1.96
RPS4XP62701 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
RPS4XP62701 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
RPS4XP62701 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
RPS4XP62701 AC078974.1-201ENST00000411597 223 ntBASIC2.79□□□□□ -1.96
RPS4XP62701 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC2.79□□□□□ -1.96
RPS4XP62701 VPS26BP1-201ENST00000417155 755 ntBASIC2.79□□□□□ -1.96
RPS4XP62701 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC2.79□□□□□ -1.96
RPS4XP62701 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.79□□□□□ -1.96
RPS4XP62701 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC2.79□□□□□ -1.96
RPS4XP62701 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC2.79□□□□□ -1.96
RPS4XP62701 AL390023.1-201ENST00000428836 262 ntBASIC2.79□□□□□ -1.96
RPS4XP62701 RPL23AP69-201ENST00000431134 458 ntBASIC2.79□□□□□ -1.96
RPS4XP62701 AL049734.2-201ENST00000441066 616 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 164.1 ms