Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC2.96□□□□□ -1.94
SRP54P61011 AC027449.1-201ENST00000608890 407 ntBASIC2.96□□□□□ -1.94
SRP54P61011 AC103710.4-201ENST00000609301 899 ntBASIC2.96□□□□□ -1.94
SRP54P61011 U1.23-201ENST00000610293 146 ntBASIC2.96□□□□□ -1.94
SRP54P61011 AC092106.3-201ENST00000611308 722 ntBASIC2.96□□□□□ -1.94
SRP54P61011 MIR7106-201ENST00000612419 65 ntBASIC2.96□□□□□ -1.94
SRP54P61011 AC093838.1-201ENST00000613014 469 ntBASIC2.96□□□□□ -1.94
SRP54P61011 TUG1_2.1-201ENST00000614234 87 ntBASIC2.96□□□□□ -1.94
SRP54P61011 AC004696.1-201ENST00000614345 607 ntBASIC2.96□□□□□ -1.94
SRP54P61011 RNU1-68P-201ENST00000615382 146 ntBASIC2.96□□□□□ -1.94
SRP54P61011 U1.39-201ENST00000621562 146 ntBASIC2.96□□□□□ -1.94
SRP54P61011 AC068787.1-201ENST00000623908 691 ntBASIC2.96□□□□□ -1.94
SRP54P61011 AP000676.4-201ENST00000624659 623 ntBASIC2.96□□□□□ -1.94
SRP54P61011 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.96□□□□□ -1.94
SRP54P61011 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.96□□□□□ -1.94
SRP54P61011 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.96□□□□□ -1.94
SRP54P61011 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
SRP54P61011 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
SRP54P61011 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC2.95□□□□□ -1.94
SRP54P61011 RNU6-270P-201ENST00000364131 105 ntBASIC2.95□□□□□ -1.94
SRP54P61011 SNORA72.3-201ENST00000365074 132 ntBASIC2.95□□□□□ -1.94
SRP54P61011 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC2.95□□□□□ -1.94
SRP54P61011 MIR325-201ENST00000385260 98 ntBASIC2.95□□□□□ -1.94
SRP54P61011 RPL21P75-201ENST00000396599 483 ntBASIC2.95□□□□□ -1.94
SRP54P61011 RPL21P28-201ENST00000401418 483 ntBASIC2.95□□□□□ -1.94
SRP54P61011 AL592114.1-201ENST00000403842 483 ntBASIC2.95□□□□□ -1.94
SRP54P61011 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC2.95□□□□□ -1.94
SRP54P61011 AL117351.1-201ENST00000438864 766 ntBASIC2.95□□□□□ -1.94
SRP54P61011 Z82210.1-201ENST00000440037 231 ntBASIC2.95□□□□□ -1.94
SRP54P61011 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.95□□□□□ -1.94
SRP54P61011 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC2.95□□□□□ -1.94
SRP54P61011 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.95□□□□□ -1.94
SRP54P61011 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.95□□□□□ -1.94
SRP54P61011 SNORA59A-201ENST00000459326 152 ntBASIC2.95□□□□□ -1.94
SRP54P61011 RN7SL75P-201ENST00000461926 281 ntBASIC2.95□□□□□ -1.94
SRP54P61011 RPL21P39-201ENST00000463605 483 ntBASIC2.95□□□□□ -1.94
SRP54P61011 RPS20P22-201ENST00000473700 357 ntBASIC2.95□□□□□ -1.94
SRP54P61011 RPL21P93-201ENST00000480465 489 ntBASIC2.95□□□□□ -1.94
SRP54P61011 AC233702.1-201ENST00000482905 502 ntBASIC2.95□□□□□ -1.94
SRP54P61011 AC087190.1-201ENST00000484462 480 ntBASIC2.95□□□□□ -1.94
SRP54P61011 AC093591.1-201ENST00000491435 481 ntBASIC2.95□□□□□ -1.94
SRP54P61011 RPL21P16-201ENST00000495531 483 ntBASIC2.95□□□□□ -1.94
SRP54P61011 AC135721.1-201ENST00000497954 479 ntBASIC2.95□□□□□ -1.94
SRP54P61011 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC2.95□□□□□ -1.94
SRP54P61011 AC034244.1-201ENST00000507687 207 ntBASIC2.95□□□□□ -1.94
SRP54P61011 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC2.95□□□□□ -1.94
SRP54P61011 AC098799.2-201ENST00000509466 868 ntBASIC2.95□□□□□ -1.94
SRP54P61011 AC119751.5-201ENST00000514077 770 ntBASIC2.95□□□□□ -1.94
SRP54P61011 SNORA31.21-201ENST00000517180 77 ntBASIC2.95□□□□□ -1.94
SRP54P61011 AP002748.2-201ENST00000528671 348 ntBASIC2.95□□□□□ -1.94
SRP54P61011 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.95□□□□□ -1.94
SRP54P61011 AC023538.1-201ENST00000534576 736 ntBASIC2.95□□□□□ -1.94
SRP54P61011 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.95□□□□□ -1.94
SRP54P61011 AL133271.1-201ENST00000538229 291 ntBASIC2.95□□□□□ -1.94
SRP54P61011 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.95□□□□□ -1.94
SRP54P61011 TRAV28-201ENST00000557548 323 ntBASIC2.95□□□□□ -1.94
SRP54P61011 AC005951.2-201ENST00000576282 495 ntBASIC2.95□□□□□ -1.94
SRP54P61011 AC060771.1-201ENST00000582031 164 ntBASIC2.95□□□□□ -1.94
SRP54P61011 AC006504.3-201ENST00000586818 523 ntBASIC2.95□□□□□ -1.94
SRP54P61011 AC061975.8-201ENST00000587058 721 ntBASIC2.95□□□□□ -1.94
SRP54P61011 AL033523.1-201ENST00000605153 153 ntBASIC2.95□□□□□ -1.94
SRP54P61011 AL139344.1-201ENST00000605228 195 ntBASIC2.95□□□□□ -1.94
SRP54P61011 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC2.95□□□□□ -1.94
SRP54P61011 AC073308.1-201ENST00000623696 305 ntBASIC2.95□□□□□ -1.94
SRP54P61011 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.95□□□□□ -1.94
SRP54P61011 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
SRP54P61011 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.94□□□□□ -1.94
SRP54P61011 RPL21P132-201ENST00000331267 462 ntBASIC2.94□□□□□ -1.94
SRP54P61011 AC073325.2-201ENST00000339545 159 ntBASIC2.94□□□□□ -1.94
SRP54P61011 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
SRP54P61011 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC2.94□□□□□ -1.94
SRP54P61011 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC2.94□□□□□ -1.94
SRP54P61011 AC129850.1-201ENST00000436203 508 ntBASIC2.94□□□□□ -1.94
SRP54P61011 BNIP3P2-201ENST00000441221 577 ntBASIC2.94□□□□□ -1.94
SRP54P61011 AL606517.1-201ENST00000446914 387 ntBASIC2.94□□□□□ -1.94
SRP54P61011 TPT1P14-201ENST00000448018 505 ntBASIC2.94□□□□□ -1.94
SRP54P61011 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC2.94□□□□□ -1.94
SRP54P61011 RPS29P12-201ENST00000460178 152 ntBASIC2.94□□□□□ -1.94
SRP54P61011 RN7SL20P-201ENST00000488827 297 ntBASIC2.94□□□□□ -1.94
SRP54P61011 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC2.94□□□□□ -1.94
SRP54P61011 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
SRP54P61011 AC083906.5-201ENST00000503722 328 ntBASIC2.94□□□□□ -1.94
SRP54P61011 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC2.94□□□□□ -1.94
SRP54P61011 CDC42P4-201ENST00000510507 563 ntBASIC2.94□□□□□ -1.94
SRP54P61011 SCGB1D5P-201ENST00000515134 247 ntBASIC2.94□□□□□ -1.94
SRP54P61011 RNU6-928P-201ENST00000516876 104 ntBASIC2.94□□□□□ -1.94
SRP54P61011 NRON-201ENST00000517270 370 ntBASIC2.94□□□□□ -1.94
SRP54P61011 AC090136.1-201ENST00000520009 240 ntBASIC2.94□□□□□ -1.94
SRP54P61011 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.94□□□□□ -1.94
SRP54P61011 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC2.94□□□□□ -1.94
SRP54P61011 AL357094.1-201ENST00000603845 844 ntBASIC2.94□□□□□ -1.94
SRP54P61011 AC024560.3-201ENST00000608482 349 ntBASIC2.94□□□□□ -1.94
SRP54P61011 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
SRP54P61011 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
SRP54P61011 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
SRP54P61011 NF1-214ENST00000490416 1329 ntTSL 3 BASIC2.93□□□□□ -1.94
SRP54P61011 PCF11-AS1-201ENST00000602322 1516 ntBASIC2.93□□□□□ -1.94
SRP54P61011 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.93□□□□□ -1.94
SRP54P61011 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
SRP54P61011 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms