Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 PRO1804-201ENST00000623780 2050 ntBASIC3.91□□□□□ -1.78
CLRN1P58418 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
CLRN1P58418 AC079741.1-201ENST00000321498 212 ntBASIC3.91□□□□□ -1.78
CLRN1P58418 RNA5SP235-201ENST00000365411 114 ntBASIC3.91□□□□□ -1.78
CLRN1P58418 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CLRN1P58418 SNORA36C-201ENST00000384289 132 ntBASIC3.91□□□□□ -1.78
CLRN1P58418 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CLRN1P58418 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.91□□□□□ -1.78
CLRN1P58418 RN7SKP216-201ENST00000411050 312 ntBASIC3.91□□□□□ -1.78
CLRN1P58418 RNU6-1304P-201ENST00000411374 106 ntBASIC3.91□□□□□ -1.78
CLRN1P58418 AL139095.3-201ENST00000419672 1203 ntBASIC3.91□□□□□ -1.78
CLRN1P58418 MTCO1P39-201ENST00000426148 480 ntBASIC3.91□□□□□ -1.78
CLRN1P58418 GTF2IP13-201ENST00000438487 386 ntBASIC3.91□□□□□ -1.78
CLRN1P58418 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.91□□□□□ -1.78
CLRN1P58418 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
CLRN1P58418 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC3.91□□□□□ -1.78
CLRN1P58418 AC022795.1-201ENST00000473808 480 ntBASIC3.91□□□□□ -1.78
CLRN1P58418 AC096576.1-201ENST00000489014 359 ntBASIC3.91□□□□□ -1.78
CLRN1P58418 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC3.91□□□□□ -1.78
CLRN1P58418 AC231760.1-201ENST00000498002 260 ntBASIC3.91□□□□□ -1.78
CLRN1P58418 VN1R104P-201ENST00000505115 1009 ntBASIC3.91□□□□□ -1.78
CLRN1P58418 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.91□□□□□ -1.78
CLRN1P58418 AC015795.1-201ENST00000513669 327 ntBASIC3.91□□□□□ -1.78
CLRN1P58418 RN7SKP24-201ENST00000515888 284 ntBASIC3.91□□□□□ -1.78
CLRN1P58418 RNU6-1170P-201ENST00000515974 106 ntBASIC3.91□□□□□ -1.78
CLRN1P58418 RNA5SP454-201ENST00000517231 127 ntBASIC3.91□□□□□ -1.78
CLRN1P58418 RN7SKP92-201ENST00000517266 244 ntBASIC3.91□□□□□ -1.78
CLRN1P58418 COPS8P3-201ENST00000526024 482 ntBASIC3.91□□□□□ -1.78
CLRN1P58418 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC3.91□□□□□ -1.78
CLRN1P58418 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.91□□□□□ -1.78
CLRN1P58418 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.91□□□□□ -1.78
CLRN1P58418 AC084783.1-201ENST00000565846 910 ntBASIC3.91□□□□□ -1.78
CLRN1P58418 BNIP3P22-201ENST00000593399 556 ntBASIC3.91□□□□□ -1.78
CLRN1P58418 AL445363.3-201ENST00000623080 671 ntBASIC3.91□□□□□ -1.78
CLRN1P58418 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
CLRN1P58418 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CLRN1P58418 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.91□□□□□ -1.78
CLRN1P58418 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.91□□□□□ -1.78
CLRN1P58418 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.91□□□□□ -1.78
CLRN1P58418 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
CLRN1P58418 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
CLRN1P58418 AL365440.1-201ENST00000436135 2167 ntBASIC3.9□□□□□ -1.78
CLRN1P58418 RAD17P1-201ENST00000418130 2042 ntBASIC3.9□□□□□ -1.78
CLRN1P58418 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
CLRN1P58418 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.9□□□□□ -1.78
CLRN1P58418 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.9□□□□□ -1.78
CLRN1P58418 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CLRN1P58418 RPL32P3-201ENST00000359025 275 ntBASIC3.9□□□□□ -1.79
CLRN1P58418 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CLRN1P58418 Y_RNA.399-201ENST00000383955 105 ntBASIC3.9□□□□□ -1.79
CLRN1P58418 MIR3065-201ENST00000390137 79 ntBASIC3.9□□□□□ -1.79
CLRN1P58418 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
CLRN1P58418 RNU6-817P-201ENST00000391083 104 ntBASIC3.9□□□□□ -1.79
CLRN1P58418 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
CLRN1P58418 MIR450B-201ENST00000401182 78 ntBASIC3.9□□□□□ -1.79
CLRN1P58418 RN7SKP158-201ENST00000410453 326 ntBASIC3.9□□□□□ -1.79
CLRN1P58418 MIR1911-201ENST00000410783 80 ntBASIC3.9□□□□□ -1.79
CLRN1P58418 RN7SKP167-201ENST00000411047 285 ntBASIC3.9□□□□□ -1.79
CLRN1P58418 RPL37P10-201ENST00000412884 288 ntBASIC3.9□□□□□ -1.79
CLRN1P58418 AL590139.1-201ENST00000416267 400 ntBASIC3.9□□□□□ -1.79
CLRN1P58418 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC3.9□□□□□ -1.79
CLRN1P58418 AL669831.1-202ENST00000428504 417 ntBASIC3.9□□□□□ -1.79
CLRN1P58418 AL591212.2-201ENST00000433923 257 ntBASIC3.9□□□□□ -1.79
CLRN1P58418 RPL23AP89-201ENST00000439324 255 ntBASIC3.9□□□□□ -1.79
CLRN1P58418 AC011753.3-201ENST00000443436 406 ntBASIC3.9□□□□□ -1.79
CLRN1P58418 MTND4P19-201ENST00000446659 478 ntBASIC3.9□□□□□ -1.79
CLRN1P58418 RNU6-953P-201ENST00000459154 107 ntBASIC3.9□□□□□ -1.79
CLRN1P58418 AC027575.1-201ENST00000481064 460 ntBASIC3.9□□□□□ -1.79
CLRN1P58418 AP002812.1-201ENST00000495378 474 ntBASIC3.9□□□□□ -1.79
CLRN1P58418 MTND5P5-201ENST00000503764 376 ntBASIC3.9□□□□□ -1.79
CLRN1P58418 RPL39P5-202ENST00000512505 151 ntBASIC3.9□□□□□ -1.79
CLRN1P58418 RNU2-69P-201ENST00000516061 100 ntBASIC3.9□□□□□ -1.79
CLRN1P58418 IGLVIV-65-201ENST00000517313 360 ntBASIC3.9□□□□□ -1.79
CLRN1P58418 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC3.9□□□□□ -1.79
CLRN1P58418 AP004371.1-201ENST00000525240 214 ntBASIC3.9□□□□□ -1.79
CLRN1P58418 AP005639.2-201ENST00000527592 928 ntBASIC3.9□□□□□ -1.79
CLRN1P58418 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.9□□□□□ -1.79
CLRN1P58418 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.9□□□□□ -1.79
CLRN1P58418 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC3.9□□□□□ -1.79
CLRN1P58418 AL352979.3-201ENST00000553515 247 ntBASIC3.9□□□□□ -1.79
CLRN1P58418 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC3.9□□□□□ -1.79
CLRN1P58418 RPL23AP97-201ENST00000568955 471 ntBASIC3.9□□□□□ -1.79
CLRN1P58418 AC138761.3-201ENST00000579993 334 ntBASIC3.9□□□□□ -1.79
CLRN1P58418 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.9□□□□□ -1.79
CLRN1P58418 AC022893.3-201ENST00000607665 437 ntBASIC3.9□□□□□ -1.79
CLRN1P58418 5S_rRNA.16-201ENST00000612928 119 ntBASIC3.9□□□□□ -1.79
CLRN1P58418 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC3.9□□□□□ -1.79
CLRN1P58418 AC134503.1-201ENST00000633048 54 ntBASIC3.9□□□□□ -1.79
CLRN1P58418 OR52H1-202ENST00000641796 1061 ntBASIC3.9□□□□□ -1.79
CLRN1P58418 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC3.9□□□□□ -1.79
CLRN1P58418 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CLRN1P58418 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC3.9□□□□□ -1.79
CLRN1P58418 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CLRN1P58418 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CLRN1P58418 AC090337.1-201ENST00000579651 2074 ntBASIC3.9□□□□□ -1.79
CLRN1P58418 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CLRN1P58418 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CLRN1P58418 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CLRN1P58418 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC3.89□□□□□ -1.79
CLRN1P58418 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms