Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 AC005951.2-201ENST00000576282 495 ntBASIC3.62□□□□□ -1.83
NR1H2P55055 RN7SL703P-201ENST00000578485 302 ntBASIC3.62□□□□□ -1.83
NR1H2P55055 MIR4293-201ENST00000584305 78 ntBASIC3.62□□□□□ -1.83
NR1H2P55055 DUXAP4-201ENST00000603046 613 ntBASIC3.62□□□□□ -1.83
NR1H2P55055 AC073648.5-201ENST00000603502 305 ntBASIC3.62□□□□□ -1.83
NR1H2P55055 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.62□□□□□ -1.83
NR1H2P55055 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.62□□□□□ -1.83
NR1H2P55055 MIR8058-201ENST00000615737 89 ntBASIC3.62□□□□□ -1.83
NR1H2P55055 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.62□□□□□ -1.83
NR1H2P55055 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.62□□□□□ -1.83
NR1H2P55055 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
NR1H2P55055 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
NR1H2P55055 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
NR1H2P55055 AL049641.1-201ENST00000441055 1948 ntBASIC3.62□□□□□ -1.83
NR1H2P55055 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
NR1H2P55055 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
NR1H2P55055 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
NR1H2P55055 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
NR1H2P55055 MTND5P29-201ENST00000458676 1807 ntBASIC3.61□□□□□ -1.83
NR1H2P55055 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.61□□□□□ -1.83
NR1H2P55055 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
NR1H2P55055 RNU6-283P-201ENST00000364788 107 ntBASIC3.61□□□□□ -1.83
NR1H2P55055 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.61□□□□□ -1.83
NR1H2P55055 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.61□□□□□ -1.83
NR1H2P55055 SNORA11.1-201ENST00000408133 129 ntBASIC3.61□□□□□ -1.83
NR1H2P55055 HSPE1P12-201ENST00000412576 301 ntBASIC3.61□□□□□ -1.83
NR1H2P55055 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC3.61□□□□□ -1.83
NR1H2P55055 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.61□□□□□ -1.83
NR1H2P55055 AC092473.1-201ENST00000441098 221 ntBASIC3.61□□□□□ -1.83
NR1H2P55055 ATP5C1P1-201ENST00000441945 895 ntBASIC3.61□□□□□ -1.83
NR1H2P55055 AC092798.1-201ENST00000458542 409 ntBASIC3.61□□□□□ -1.83
NR1H2P55055 U3.44-201ENST00000458938 192 ntBASIC3.61□□□□□ -1.83
NR1H2P55055 HMGN2P13-201ENST00000476476 274 ntBASIC3.61□□□□□ -1.83
NR1H2P55055 AF213884.1-201ENST00000488102 463 ntBASIC3.61□□□□□ -1.83
NR1H2P55055 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC3.61□□□□□ -1.83
NR1H2P55055 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC3.61□□□□□ -1.83
NR1H2P55055 AC010587.1-201ENST00000505809 469 ntBASIC3.61□□□□□ -1.83
NR1H2P55055 MTND2P33-201ENST00000506452 1031 ntBASIC3.61□□□□□ -1.83
NR1H2P55055 RNU6-720P-201ENST00000516363 108 ntBASIC3.61□□□□□ -1.83
NR1H2P55055 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.61□□□□□ -1.83
NR1H2P55055 AP003033.1-201ENST00000527244 415 ntBASIC3.61□□□□□ -1.83
NR1H2P55055 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC3.61□□□□□ -1.83
NR1H2P55055 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.61□□□□□ -1.83
NR1H2P55055 AC034105.3-201ENST00000565294 442 ntBASIC3.61□□□□□ -1.83
NR1H2P55055 HMGB1P6-201ENST00000569046 646 ntBASIC3.61□□□□□ -1.83
NR1H2P55055 AL161729.4-201ENST00000604650 476 ntBASIC3.61□□□□□ -1.83
NR1H2P55055 AC004696.1-201ENST00000614345 607 ntBASIC3.61□□□□□ -1.83
NR1H2P55055 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.61□□□□□ -1.83
NR1H2P55055 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.61□□□□□ -1.83
NR1H2P55055 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
NR1H2P55055 AC072046.2-201ENST00000618366 268 ntBASIC3.61□□□□□ -1.83
NR1H2P55055 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
NR1H2P55055 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC3.61□□□□□ -1.83
NR1H2P55055 AL136313.1-201ENST00000624804 202 ntBASIC3.61□□□□□ -1.83
NR1H2P55055 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.61□□□□□ -1.83
NR1H2P55055 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
NR1H2P55055 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
NR1H2P55055 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
NR1H2P55055 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
NR1H2P55055 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.6□□□□□ -1.83
NR1H2P55055 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
NR1H2P55055 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.6□□□□□ -1.83
NR1H2P55055 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
NR1H2P55055 OR1S2-201ENST00000302592 978 ntBASIC3.6□□□□□ -1.83
NR1H2P55055 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.6□□□□□ -1.83
NR1H2P55055 MIR208A-201ENST00000362287 71 ntBASIC3.6□□□□□ -1.83
NR1H2P55055 Y_RNA.3-201ENST00000362331 103 ntBASIC3.6□□□□□ -1.83
NR1H2P55055 Y_RNA.41-201ENST00000362646 102 ntBASIC3.6□□□□□ -1.83
NR1H2P55055 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.6□□□□□ -1.83
NR1H2P55055 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.6□□□□□ -1.83
NR1H2P55055 Y_RNA.505-201ENST00000384489 102 ntBASIC3.6□□□□□ -1.83
NR1H2P55055 Y_RNA.582-201ENST00000391023 95 ntBASIC3.6□□□□□ -1.83
NR1H2P55055 RNU6-192P-201ENST00000391253 100 ntBASIC3.6□□□□□ -1.83
NR1H2P55055 RPS15AP12-201ENST00000419498 388 ntBASIC3.6□□□□□ -1.83
NR1H2P55055 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.6□□□□□ -1.83
NR1H2P55055 AL445584.1-201ENST00000431451 330 ntBASIC3.6□□□□□ -1.83
NR1H2P55055 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC3.6□□□□□ -1.83
NR1H2P55055 AL512844.2-201ENST00000433990 593 ntBASIC3.6□□□□□ -1.83
NR1H2P55055 ARPC3P1-201ENST00000437218 533 ntBASIC3.6□□□□□ -1.83
NR1H2P55055 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.6□□□□□ -1.83
NR1H2P55055 MTCYBP1-201ENST00000454315 1119 ntBASIC3.6□□□□□ -1.83
NR1H2P55055 AC087588.1-201ENST00000462203 316 ntBASIC3.6□□□□□ -1.83
NR1H2P55055 AL358832.1-201ENST00000497800 389 ntBASIC3.6□□□□□ -1.83
NR1H2P55055 KCTD9P5-201ENST00000504141 1170 ntBASIC3.6□□□□□ -1.83
NR1H2P55055 AC114797.1-201ENST00000514003 728 ntBASIC3.6□□□□□ -1.83
NR1H2P55055 RNU6-430P-201ENST00000517078 107 ntBASIC3.6□□□□□ -1.83
NR1H2P55055 RN7SKP258-201ENST00000517151 304 ntBASIC3.6□□□□□ -1.83
NR1H2P55055 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
NR1H2P55055 CASP1P1-201ENST00000526345 212 ntBASIC3.6□□□□□ -1.83
NR1H2P55055 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC3.6□□□□□ -1.83
NR1H2P55055 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC3.6□□□□□ -1.83
NR1H2P55055 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.6□□□□□ -1.83
NR1H2P55055 AC011602.1-201ENST00000546484 331 ntBASIC3.6□□□□□ -1.83
NR1H2P55055 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
NR1H2P55055 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.6□□□□□ -1.83
NR1H2P55055 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.6□□□□□ -1.83
NR1H2P55055 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC3.6□□□□□ -1.83
NR1H2P55055 TRAV28-201ENST00000557548 323 ntBASIC3.6□□□□□ -1.83
NR1H2P55055 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.6□□□□□ -1.83
NR1H2P55055 AC022655.2-201ENST00000577280 318 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms