Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
NUP98P52948 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC1.86□□□□□ -2.11
NUP98P52948 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
NUP98P52948 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC1.85□□□□□ -2.11
NUP98P52948 RNU6-392P-201ENST00000364926 101 ntBASIC1.85□□□□□ -2.11
NUP98P52948 RNA5SP354-201ENST00000391247 136 ntBASIC1.85□□□□□ -2.11
NUP98P52948 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
NUP98P52948 Z86062.1-201ENST00000406773 777 ntBASIC1.85□□□□□ -2.11
NUP98P52948 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC1.85□□□□□ -2.11
NUP98P52948 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.85□□□□□ -2.11
NUP98P52948 AC009414.1-201ENST00000427200 443 ntBASIC1.85□□□□□ -2.11
NUP98P52948 OR6K5P-201ENST00000447050 945 ntBASIC1.85□□□□□ -2.11
NUP98P52948 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC1.85□□□□□ -2.11
NUP98P52948 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC1.85□□□□□ -2.11
NUP98P52948 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC1.85□□□□□ -2.11
NUP98P52948 VTRNA2-2P-201ENST00000516091 103 ntBASIC1.85□□□□□ -2.11
NUP98P52948 RPPH1-2P-201ENST00000516688 293 ntBASIC1.85□□□□□ -2.11
NUP98P52948 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.85□□□□□ -2.11
NUP98P52948 IGLV3-17-201ENST00000519099 244 ntBASIC1.85□□□□□ -2.11
NUP98P52948 PTK2-220ENST00000520151 573 ntTSL 4 BASIC1.85□□□□□ -2.11
NUP98P52948 AC125611.2-201ENST00000551907 647 ntBASIC1.85□□□□□ -2.11
NUP98P52948 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.85□□□□□ -2.11
NUP98P52948 AL669831.4-202ENST00000590817 238 ntBASIC1.85□□□□□ -2.11
NUP98P52948 AC004775.1-201ENST00000607389 753 ntBASIC1.85□□□□□ -2.11
NUP98P52948 AC106028.5-201ENST00000610332 395 ntBASIC1.85□□□□□ -2.11
NUP98P52948 AC011477.1-204ENST00000623416 1325 ntBASIC1.85□□□□□ -2.11
NUP98P52948 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
NUP98P52948 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.85□□□□□ -2.11
NUP98P52948 Y_RNA.269-201ENST00000364685 89 ntBASIC1.84□□□□□ -2.11
NUP98P52948 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.84□□□□□ -2.11
NUP98P52948 SNORA51.12-201ENST00000384448 134 ntBASIC1.84□□□□□ -2.11
NUP98P52948 RNU6-1151P-201ENST00000384684 107 ntBASIC1.84□□□□□ -2.11
NUP98P52948 RNU6-272P-201ENST00000411028 104 ntBASIC1.84□□□□□ -2.11
NUP98P52948 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC1.84□□□□□ -2.11
NUP98P52948 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC1.84□□□□□ -2.11
NUP98P52948 SNORA31.13-201ENST00000516624 135 ntBASIC1.84□□□□□ -2.11
NUP98P52948 RNU1-92P-201ENST00000517017 135 ntBASIC1.84□□□□□ -2.11
NUP98P52948 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
NUP98P52948 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
NUP98P52948 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
NUP98P52948 AC121758.2-201ENST00000553271 193 ntBASIC1.84□□□□□ -2.11
NUP98P52948 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC1.84□□□□□ -2.11
NUP98P52948 AL157834.3-201ENST00000615543 103 ntBASIC1.84□□□□□ -2.11
NUP98P52948 AL356118.1-201ENST00000635272 1078 ntBASIC1.84□□□□□ -2.11
NUP98P52948 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC1.84□□□□□ -2.11
NUP98P52948 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
NUP98P52948 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
NUP98P52948 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
NUP98P52948 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
NUP98P52948 AC004520.1-201ENST00000608362 1413 ntBASIC1.84□□□□□ -2.12
NUP98P52948 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
NUP98P52948 RNU6-707P-201ENST00000364647 95 ntBASIC1.84□□□□□ -2.12
NUP98P52948 AL035405.1-201ENST00000400795 710 ntBASIC1.84□□□□□ -2.12
NUP98P52948 MIR1304-201ENST00000408243 91 ntBASIC1.84□□□□□ -2.12
NUP98P52948 MIR1276-201ENST00000408707 83 ntBASIC1.84□□□□□ -2.12
NUP98P52948 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.84□□□□□ -2.12
NUP98P52948 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC1.84□□□□□ -2.12
NUP98P52948 AC004865.1-201ENST00000442276 1003 ntBASIC1.84□□□□□ -2.12
NUP98P52948 AC124916.1-201ENST00000444020 547 ntBASIC1.84□□□□□ -2.12
NUP98P52948 HSFY3P-201ENST00000444242 1191 ntBASIC1.84□□□□□ -2.12
NUP98P52948 PPP1R2P5-201ENST00000457256 603 ntBASIC1.84□□□□□ -2.12
NUP98P52948 SNORD121B-201ENST00000458838 81 ntBASIC1.84□□□□□ -2.12
NUP98P52948 ZKSCAN7P1-201ENST00000543668 673 ntBASIC1.84□□□□□ -2.12
NUP98P52948 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC1.84□□□□□ -2.12
NUP98P52948 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC1.84□□□□□ -2.12
NUP98P52948 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC1.84□□□□□ -2.12
NUP98P52948 AC090666.1-201ENST00000578241 445 ntBASIC1.84□□□□□ -2.12
NUP98P52948 AL353770.2-201ENST00000620024 78 ntBASIC1.84□□□□□ -2.12
NUP98P52948 AL513185.3-201ENST00000433335 1300 ntBASIC1.84□□□□□ -2.12
NUP98P52948 MTND5P31-201ENST00000419366 1374 ntBASIC1.83□□□□□ -2.12
NUP98P52948 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
NUP98P52948 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC1.83□□□□□ -2.12
NUP98P52948 RNU6-730P-201ENST00000383954 104 ntBASIC1.83□□□□□ -2.12
NUP98P52948 RNU6-821P-201ENST00000390995 107 ntBASIC1.83□□□□□ -2.12
NUP98P52948 RNU6-1197P-201ENST00000391183 107 ntBASIC1.83□□□□□ -2.12
NUP98P52948 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.83□□□□□ -2.12
NUP98P52948 LINC01347-201ENST00000417964 355 ntBASIC1.83□□□□□ -2.12
NUP98P52948 AC009237.2-201ENST00000421358 284 ntBASIC1.83□□□□□ -2.12
NUP98P52948 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC1.83□□□□□ -2.12
NUP98P52948 MTCO1P57-201ENST00000432182 261 ntBASIC1.83□□□□□ -2.12
NUP98P52948 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC1.83□□□□□ -2.12
NUP98P52948 HMGN3P1-201ENST00000453847 193 ntBASIC1.83□□□□□ -2.12
NUP98P52948 AC096751.1-202ENST00000502691 1067 ntBASIC1.83□□□□□ -2.12
NUP98P52948 AC008427.1-201ENST00000503102 655 ntBASIC1.83□□□□□ -2.12
NUP98P52948 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC1.83□□□□□ -2.12
NUP98P52948 TRAV28-201ENST00000557548 323 ntBASIC1.83□□□□□ -2.12
NUP98P52948 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC1.83□□□□□ -2.12
NUP98P52948 HSPE1P7-201ENST00000604681 321 ntBASIC1.83□□□□□ -2.12
NUP98P52948 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.83□□□□□ -2.12
NUP98P52948 ZNF209P-201ENST00000593450 2304 ntBASIC1.83□□□□□ -2.12
NUP98P52948 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
NUP98P52948 MIR337-201ENST00000362281 93 ntBASIC1.82□□□□□ -2.12
NUP98P52948 RNU4-23P-201ENST00000362839 140 ntBASIC1.82□□□□□ -2.12
NUP98P52948 RNA5SP393-201ENST00000363423 117 ntBASIC1.82□□□□□ -2.12
NUP98P52948 SNORA25.9-201ENST00000365087 128 ntBASIC1.82□□□□□ -2.12
NUP98P52948 RNU6-152P-201ENST00000384037 107 ntBASIC1.82□□□□□ -2.12
NUP98P52948 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
NUP98P52948 STAT4-203ENST00000409995 709 ntTSL 5 BASIC1.82□□□□□ -2.12
NUP98P52948 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC1.82□□□□□ -2.12
NUP98P52948 PIGFP3-201ENST00000441918 722 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms