Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.1□□□□□ -2.23
BRCA2P51587 RNA5SP233-201ENST00000459153 113 ntBASIC1.1□□□□□ -2.23
BRCA2P51587 RPS15AP34-201ENST00000487776 387 ntBASIC1.1□□□□□ -2.23
BRCA2P51587 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC1.1□□□□□ -2.23
BRCA2P51587 RNA5SP364-201ENST00000516938 78 ntBASIC1.1□□□□□ -2.23
BRCA2P51587 AP003499.2-201ENST00000624100 483 ntBASIC1.1□□□□□ -2.23
BRCA2P51587 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC1.1□□□□□ -2.23
BRCA2P51587 AL354685.2-201ENST00000448218 1447 ntBASIC1.1□□□□□ -2.23
BRCA2P51587 RNU6-666P-201ENST00000363499 107 ntBASIC1.09□□□□□ -2.23
BRCA2P51587 PSMA2P3-201ENST00000429685 675 ntBASIC1.09□□□□□ -2.23
BRCA2P51587 ZNF965P-201ENST00000432501 817 ntBASIC1.09□□□□□ -2.23
BRCA2P51587 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.09□□□□□ -2.23
BRCA2P51587 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.09□□□□□ -2.23
BRCA2P51587 MTND5P21-201ENST00000531961 522 ntBASIC1.09□□□□□ -2.23
BRCA2P51587 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC1.09□□□□□ -2.23
BRCA2P51587 AC087588.2-201ENST00000617667 426 ntBASIC1.09□□□□□ -2.23
BRCA2P51587 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC1.09□□□□□ -2.23
BRCA2P51587 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
BRCA2P51587 PSPHP1-201ENST00000450062 261 ntBASIC1.09□□□□□ -2.23
BRCA2P51587 NDUFB4P9-201ENST00000511646 388 ntBASIC1.09□□□□□ -2.23
BRCA2P51587 OR6C7P-201ENST00000547875 934 ntBASIC1.09□□□□□ -2.23
BRCA2P51587 MAGOH2P-202ENST00000584384 429 ntBASIC1.09□□□□□ -2.23
BRCA2P51587 AC092140.2-201ENST00000618027 521 ntBASIC1.09□□□□□ -2.23
BRCA2P51587 AC008669.1-201ENST00000565823 2178 ntBASIC1.09□□□□□ -2.24
BRCA2P51587 Y_RNA.136-201ENST00000363444 102 ntBASIC1.09□□□□□ -2.24
BRCA2P51587 NUP35P2-201ENST00000416748 943 ntBASIC1.09□□□□□ -2.24
BRCA2P51587 AC244035.1-201ENST00000430042 390 ntBASIC1.09□□□□□ -2.24
BRCA2P51587 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC1.09□□□□□ -2.24
BRCA2P51587 SNORD114-21-201ENST00000606412 72 ntBASIC1.09□□□□□ -2.24
BRCA2P51587 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.09□□□□□ -2.24
BRCA2P51587 RNU6-984P-201ENST00000363236 109 ntBASIC1.08□□□□□ -2.24
BRCA2P51587 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC1.08□□□□□ -2.24
BRCA2P51587 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC1.08□□□□□ -2.24
BRCA2P51587 ARL5AP2-201ENST00000444698 533 ntBASIC1.08□□□□□ -2.24
BRCA2P51587 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC1.08□□□□□ -2.24
BRCA2P51587 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC1.08□□□□□ -2.24
BRCA2P51587 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC1.08□□□□□ -2.24
BRCA2P51587 AC107015.1-201ENST00000466902 747 ntBASIC1.08□□□□□ -2.24
BRCA2P51587 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.08□□□□□ -2.24
BRCA2P51587 AC005034.5-201ENST00000604219 466 ntBASIC1.08□□□□□ -2.24
BRCA2P51587 MIR6857-201ENST00000613267 93 ntBASIC1.08□□□□□ -2.24
BRCA2P51587 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.08□□□□□ -2.24
BRCA2P51587 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.08□□□□□ -2.24
BRCA2P51587 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC1.08□□□□□ -2.24
BRCA2P51587 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.08□□□□□ -2.24
BRCA2P51587 AL121601.2-201ENST00000438019 707 ntBASIC1.08□□□□□ -2.24
BRCA2P51587 GDI2P2-201ENST00000445131 608 ntBASIC1.08□□□□□ -2.24
BRCA2P51587 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC1.08□□□□□ -2.24
BRCA2P51587 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
BRCA2P51587 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
BRCA2P51587 RNU6-17P-201ENST00000384245 107 ntBASIC1.07□□□□□ -2.24
BRCA2P51587 RNU6-18P-201ENST00000384527 107 ntBASIC1.07□□□□□ -2.24
BRCA2P51587 SNORA68.2-201ENST00000391263 128 ntBASIC1.07□□□□□ -2.24
BRCA2P51587 OR51B8P-201ENST00000449892 769 ntBASIC1.07□□□□□ -2.24
BRCA2P51587 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC1.07□□□□□ -2.24
BRCA2P51587 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.07□□□□□ -2.24
BRCA2P51587 SSXP10-201ENST00000402595 565 ntBASIC1.07□□□□□ -2.24
BRCA2P51587 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.07□□□□□ -2.24
BRCA2P51587 NAA50-206ENST00000493454 964 ntTSL 2 BASIC1.07□□□□□ -2.24
BRCA2P51587 AC019070.1-201ENST00000415008 1024 ntBASIC1.06□□□□□ -2.24
BRCA2P51587 CST2P1-201ENST00000425770 87 ntBASIC1.06□□□□□ -2.24
BRCA2P51587 AK3P2-201ENST00000507976 429 ntBASIC1.06□□□□□ -2.24
BRCA2P51587 PDCD5P1-201ENST00000543528 309 ntBASIC1.06□□□□□ -2.24
BRCA2P51587 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
BRCA2P51587 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.06□□□□□ -2.24
BRCA2P51587 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC1.06□□□□□ -2.24
BRCA2P51587 AC138473.1-201ENST00000605717 526 ntBASIC1.06□□□□□ -2.24
BRCA2P51587 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
BRCA2P51587 AL512430.2-201ENST00000406786 339 ntBASIC1.06□□□□□ -2.24
BRCA2P51587 RN7SKP51-201ENST00000410781 304 ntBASIC1.06□□□□□ -2.24
BRCA2P51587 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
BRCA2P51587 AC096751.1-202ENST00000502691 1067 ntBASIC1.06□□□□□ -2.24
BRCA2P51587 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC1.06□□□□□ -2.24
BRCA2P51587 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.06□□□□□ -2.24
BRCA2P51587 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.06□□□□□ -2.24
BRCA2P51587 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC1.05□□□□□ -2.24
BRCA2P51587 OR6K5P-201ENST00000447050 945 ntBASIC1.05□□□□□ -2.24
BRCA2P51587 MIR7974-201ENST00000615835 79 ntBASIC1.05□□□□□ -2.24
BRCA2P51587 COX6CP18-201ENST00000448769 222 ntBASIC1.05□□□□□ -2.24
BRCA2P51587 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC1.05□□□□□ -2.24
BRCA2P51587 RPS29P23-201ENST00000458635 123 ntBASIC1.05□□□□□ -2.24
BRCA2P51587 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.05□□□□□ -2.24
BRCA2P51587 AC104806.1-201ENST00000508720 308 ntBASIC1.05□□□□□ -2.24
BRCA2P51587 AC087808.1-201ENST00000520501 361 ntBASIC1.05□□□□□ -2.24
BRCA2P51587 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC1.05□□□□□ -2.24
BRCA2P51587 VN1R79P-201ENST00000593540 513 ntBASIC1.05□□□□□ -2.24
BRCA2P51587 AC011330.2-201ENST00000621680 635 ntBASIC1.05□□□□□ -2.24
BRCA2P51587 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.05□□□□□ -2.24
BRCA2P51587 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
BRCA2P51587 RNU6ATAC27P-201ENST00000408289 119 ntBASIC1.05□□□□□ -2.24
BRCA2P51587 AC109780.2-201ENST00000413467 845 ntBASIC1.05□□□□□ -2.24
BRCA2P51587 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC1.05□□□□□ -2.24
BRCA2P51587 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.05□□□□□ -2.24
BRCA2P51587 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC1.05□□□□□ -2.24
BRCA2P51587 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
BRCA2P51587 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.05□□□□□ -2.24
BRCA2P51587 RNU6ATAC4P-201ENST00000387446 126 ntBASIC1.04□□□□□ -2.24
BRCA2P51587 AC233728.2-201ENST00000425348 757 ntBASIC1.04□□□□□ -2.24
BRCA2P51587 AC012497.1-201ENST00000429392 575 ntBASIC1.04□□□□□ -2.24
BRCA2P51587 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 127.6 ms