Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 SCARNA17.4-201ENST00000614296 143 ntBASIC1.69□□□□□ -2.14
SRP9P49458 RN7SL853P-201ENST00000617250 223 ntBASIC1.69□□□□□ -2.14
SRP9P49458 AC244517.12-201ENST00000623581 663 ntBASIC1.69□□□□□ -2.14
SRP9P49458 MTND5P29-201ENST00000458676 1807 ntBASIC1.68□□□□□ -2.14
SRP9P49458 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC1.68□□□□□ -2.14
SRP9P49458 RNU6-730P-201ENST00000383954 104 ntBASIC1.68□□□□□ -2.14
SRP9P49458 SNORA51.12-201ENST00000384448 134 ntBASIC1.68□□□□□ -2.14
SRP9P49458 AL512604.1-201ENST00000404812 257 ntBASIC1.68□□□□□ -2.14
SRP9P49458 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC1.68□□□□□ -2.14
SRP9P49458 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC1.68□□□□□ -2.14
SRP9P49458 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC1.68□□□□□ -2.14
SRP9P49458 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.68□□□□□ -2.14
SRP9P49458 AL513124.1-201ENST00000450410 614 ntBASIC1.68□□□□□ -2.14
SRP9P49458 PPP1R2P5-201ENST00000457256 603 ntBASIC1.68□□□□□ -2.14
SRP9P49458 MTCO1P42-201ENST00000457379 726 ntBASIC1.68□□□□□ -2.14
SRP9P49458 RPL23AP41-201ENST00000484754 458 ntBASIC1.68□□□□□ -2.14
SRP9P49458 AC106872.3-201ENST00000495104 446 ntBASIC1.68□□□□□ -2.14
SRP9P49458 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC1.68□□□□□ -2.14
SRP9P49458 AC112518.2-201ENST00000508565 425 ntBASIC1.68□□□□□ -2.14
SRP9P49458 RNU1-41P-201ENST00000516161 162 ntBASIC1.68□□□□□ -2.14
SRP9P49458 RNU1-48P-201ENST00000516400 162 ntBASIC1.68□□□□□ -2.14
SRP9P49458 RNU4ATAC10P-201ENST00000516967 122 ntBASIC1.68□□□□□ -2.14
SRP9P49458 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.68□□□□□ -2.14
SRP9P49458 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC1.68□□□□□ -2.14
SRP9P49458 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC1.68□□□□□ -2.14
SRP9P49458 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
SRP9P49458 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
SRP9P49458 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
SRP9P49458 RNU6-444P-201ENST00000383988 108 ntBASIC1.67□□□□□ -2.14
SRP9P49458 SNORA11.2-201ENST00000408318 127 ntBASIC1.67□□□□□ -2.14
SRP9P49458 RNU4-26P-201ENST00000410270 107 ntBASIC1.67□□□□□ -2.14
SRP9P49458 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC1.67□□□□□ -2.14
SRP9P49458 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.67□□□□□ -2.14
SRP9P49458 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC1.67□□□□□ -2.14
SRP9P49458 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC1.67□□□□□ -2.14
SRP9P49458 TPT1P14-201ENST00000448018 505 ntBASIC1.67□□□□□ -2.14
SRP9P49458 CDC42P1-201ENST00000456658 548 ntBASIC1.67□□□□□ -2.14
SRP9P49458 MTAPP1-201ENST00000489154 819 ntBASIC1.67□□□□□ -2.14
SRP9P49458 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC1.67□□□□□ -2.14
SRP9P49458 SNORA31.23-201ENST00000517219 133 ntBASIC1.67□□□□□ -2.14
SRP9P49458 SCARNA11.3-201ENST00000517276 130 ntBASIC1.67□□□□□ -2.14
SRP9P49458 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.67□□□□□ -2.14
SRP9P49458 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC1.67□□□□□ -2.14
SRP9P49458 YWHAZP1-201ENST00000556286 722 ntBASIC1.67□□□□□ -2.14
SRP9P49458 AC011374.2-201ENST00000607135 526 ntBASIC1.67□□□□□ -2.14
SRP9P49458 AP001521.1-201ENST00000609150 300 ntBASIC1.67□□□□□ -2.14
SRP9P49458 AL391597.1-201ENST00000618707 694 ntBASIC1.67□□□□□ -2.14
SRP9P49458 AL158801.5-201ENST00000623123 465 ntBASIC1.67□□□□□ -2.14
SRP9P49458 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC1.67□□□□□ -2.14
SRP9P49458 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC1.67□□□□□ -2.14
SRP9P49458 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
SRP9P49458 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
SRP9P49458 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.66□□□□□ -2.14
SRP9P49458 SNORD114-1-201ENST00000362705 72 ntBASIC1.66□□□□□ -2.14
SRP9P49458 RPS7P9-201ENST00000414704 586 ntBASIC1.66□□□□□ -2.14
SRP9P49458 EIF1AXP1-201ENST00000419267 435 ntBASIC1.66□□□□□ -2.14
SRP9P49458 AL445685.2-201ENST00000422551 342 ntBASIC1.66□□□□□ -2.14
SRP9P49458 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC1.66□□□□□ -2.14
SRP9P49458 HMGB3P12-201ENST00000438745 556 ntBASIC1.66□□□□□ -2.14
SRP9P49458 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC1.66□□□□□ -2.14
SRP9P49458 ATG12P2-201ENST00000456830 416 ntBASIC1.66□□□□□ -2.14
SRP9P49458 AC017007.3-201ENST00000479865 435 ntBASIC1.66□□□□□ -2.14
SRP9P49458 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.66□□□□□ -2.14
SRP9P49458 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC1.66□□□□□ -2.14
SRP9P49458 AC006499.2-201ENST00000513470 337 ntBASIC1.66□□□□□ -2.14
SRP9P49458 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC1.66□□□□□ -2.14
SRP9P49458 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC1.66□□□□□ -2.14
SRP9P49458 AL022099.1-201ENST00000604551 712 ntBASIC1.66□□□□□ -2.14
SRP9P49458 AC018618.2-201ENST00000604770 446 ntBASIC1.66□□□□□ -2.14
SRP9P49458 KATNBL1P1-201ENST00000605192 748 ntBASIC1.66□□□□□ -2.14
SRP9P49458 AC079791.1-201ENST00000605356 973 ntBASIC1.66□□□□□ -2.14
SRP9P49458 ADAM3A-203ENST00000461344 2157 ntBASIC1.66□□□□□ -2.14
SRP9P49458 AC103710.2-202ENST00000641454 2853 ntBASIC1.65□□□□□ -2.14
SRP9P49458 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC1.65□□□□□ -2.14
SRP9P49458 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.65□□□□□ -2.14
SRP9P49458 RNU6-1035P-201ENST00000384477 107 ntBASIC1.65□□□□□ -2.15
SRP9P49458 RNU2-20P-201ENST00000410425 191 ntBASIC1.65□□□□□ -2.15
SRP9P49458 OR51A3P-201ENST00000413596 924 ntBASIC1.65□□□□□ -2.15
SRP9P49458 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.65□□□□□ -2.15
SRP9P49458 AIMP1P2-201ENST00000425294 312 ntBASIC1.65□□□□□ -2.15
SRP9P49458 AL500527.1-201ENST00000448532 255 ntBASIC1.65□□□□□ -2.15
SRP9P49458 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC1.65□□□□□ -2.15
SRP9P49458 RPS20P24-201ENST00000457473 361 ntBASIC1.65□□□□□ -2.15
SRP9P49458 RNU6-798P-201ENST00000516912 103 ntBASIC1.65□□□□□ -2.15
SRP9P49458 SNORA48.10-201ENST00000516965 160 ntBASIC1.65□□□□□ -2.15
SRP9P49458 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC1.65□□□□□ -2.15
SRP9P49458 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
SRP9P49458 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.65□□□□□ -2.15
SRP9P49458 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.65□□□□□ -2.15
SRP9P49458 AC005034.5-201ENST00000604219 466 ntBASIC1.65□□□□□ -2.15
SRP9P49458 AC055876.5-201ENST00000605667 259 ntBASIC1.65□□□□□ -2.15
SRP9P49458 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.65□□□□□ -2.15
SRP9P49458 AC005858.4-201ENST00000623191 700 ntBASIC1.65□□□□□ -2.15
SRP9P49458 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
SRP9P49458 AC017104.5-201ENST00000637647 639 ntBASIC1.65□□□□□ -2.15
SRP9P49458 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC1.65□□□□□ -2.15
SRP9P49458 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
SRP9P49458 AL390862.1-201ENST00000635467 1469 ntBASIC1.64□□□□□ -2.15
SRP9P49458 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC1.64□□□□□ -2.15
SRP9P49458 AP006437.1-201ENST00000641440 3685 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 138 ms