Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
HOXD13P35453 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
HOXD13P35453 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
HOXD13P35453 RNU6-1284P-201ENST00000363701 100 ntBASIC3.47□□□□□ -1.85
HOXD13P35453 SNORA7.4-201ENST00000384249 137 ntBASIC3.47□□□□□ -1.85
HOXD13P35453 MIR325-201ENST00000385260 98 ntBASIC3.47□□□□□ -1.85
HOXD13P35453 SNORD115.1-201ENST00000391109 76 ntBASIC3.47□□□□□ -1.85
HOXD13P35453 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC3.47□□□□□ -1.85
HOXD13P35453 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
HOXD13P35453 RPL21P40-201ENST00000428586 483 ntBASIC3.47□□□□□ -1.85
HOXD13P35453 RPL23AP69-201ENST00000431134 458 ntBASIC3.47□□□□□ -1.85
HOXD13P35453 Z82210.1-201ENST00000440037 231 ntBASIC3.47□□□□□ -1.85
HOXD13P35453 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.47□□□□□ -1.85
HOXD13P35453 PRSS3P4-201ENST00000453323 162 ntBASIC3.47□□□□□ -1.85
HOXD13P35453 SNRPFP4-201ENST00000456366 242 ntBASIC3.47□□□□□ -1.85
HOXD13P35453 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.47□□□□□ -1.85
HOXD13P35453 AP002884.2-201ENST00000471647 395 ntBASIC3.47□□□□□ -1.85
HOXD13P35453 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC3.47□□□□□ -1.85
HOXD13P35453 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.47□□□□□ -1.85
HOXD13P35453 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.47□□□□□ -1.85
HOXD13P35453 MTND5P13-201ENST00000513046 1079 ntBASIC3.47□□□□□ -1.85
HOXD13P35453 RNU6-64P-201ENST00000517119 105 ntBASIC3.47□□□□□ -1.85
HOXD13P35453 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
HOXD13P35453 AC007115.1-201ENST00000546853 234 ntBASIC3.47□□□□□ -1.85
HOXD13P35453 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC3.47□□□□□ -1.85
HOXD13P35453 AL161729.4-201ENST00000604650 476 ntBASIC3.47□□□□□ -1.85
HOXD13P35453 MIR92B-201ENST00000607575 96 ntBASIC3.47□□□□□ -1.85
HOXD13P35453 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.47□□□□□ -1.85
HOXD13P35453 AC008147.4-201ENST00000617570 1204 ntBASIC3.47□□□□□ -1.85
HOXD13P35453 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.47□□□□□ -1.85
HOXD13P35453 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.47□□□□□ -1.85
HOXD13P35453 AC091931.1-201ENST00000623488 728 ntBASIC3.47□□□□□ -1.85
HOXD13P35453 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
HOXD13P35453 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.47□□□□□ -1.85
HOXD13P35453 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
HOXD13P35453 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
HOXD13P35453 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
HOXD13P35453 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.46□□□□□ -1.85
HOXD13P35453 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
HOXD13P35453 ATP8A2P3-201ENST00000426792 1536 ntBASIC3.46□□□□□ -1.86
HOXD13P35453 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.46□□□□□ -1.86
HOXD13P35453 MIR34B-201ENST00000385076 84 ntBASIC3.46□□□□□ -1.86
HOXD13P35453 RNA5SP293-201ENST00000410527 113 ntBASIC3.46□□□□□ -1.86
HOXD13P35453 Z85995.1-201ENST00000415547 335 ntBASIC3.46□□□□□ -1.86
HOXD13P35453 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC3.46□□□□□ -1.86
HOXD13P35453 AC012498.1-201ENST00000424037 437 ntBASIC3.46□□□□□ -1.86
HOXD13P35453 AC007919.1-201ENST00000429380 217 ntBASIC3.46□□□□□ -1.86
HOXD13P35453 AC244035.1-201ENST00000430042 390 ntBASIC3.46□□□□□ -1.86
HOXD13P35453 MTATP6P17-201ENST00000431030 672 ntBASIC3.46□□□□□ -1.86
HOXD13P35453 AL590365.1-201ENST00000450788 243 ntBASIC3.46□□□□□ -1.86
HOXD13P35453 RPL37P6-201ENST00000460682 294 ntBASIC3.46□□□□□ -1.86
HOXD13P35453 RPL21P8-201ENST00000465083 535 ntBASIC3.46□□□□□ -1.86
HOXD13P35453 RN7SL601P-201ENST00000471221 293 ntBASIC3.46□□□□□ -1.86
HOXD13P35453 RN7SL504P-201ENST00000494496 287 ntBASIC3.46□□□□□ -1.86
HOXD13P35453 AL358832.1-201ENST00000497800 389 ntBASIC3.46□□□□□ -1.86
HOXD13P35453 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
HOXD13P35453 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
HOXD13P35453 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
HOXD13P35453 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC3.46□□□□□ -1.86
HOXD13P35453 MIR5680-201ENST00000577577 84 ntBASIC3.46□□□□□ -1.86
HOXD13P35453 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.46□□□□□ -1.86
HOXD13P35453 UBL5P2-201ENST00000583788 219 ntBASIC3.46□□□□□ -1.86
HOXD13P35453 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.46□□□□□ -1.86
HOXD13P35453 AC012468.1-201ENST00000604888 430 ntBASIC3.46□□□□□ -1.86
HOXD13P35453 AC099778.2-201ENST00000610904 211 ntBASIC3.46□□□□□ -1.86
HOXD13P35453 AC027807.2-201ENST00000616099 408 ntBASIC3.46□□□□□ -1.86
HOXD13P35453 FRG1KP-201ENST00000623592 341 ntBASIC3.46□□□□□ -1.86
HOXD13P35453 AC018692.3-201ENST00000623929 123 ntBASIC3.46□□□□□ -1.86
HOXD13P35453 AC026422.1-201ENST00000623961 452 ntBASIC3.46□□□□□ -1.86
HOXD13P35453 AC004777.1-201ENST00000624317 287 ntBASIC3.46□□□□□ -1.86
HOXD13P35453 AC007494.3-201ENST00000624660 743 ntBASIC3.46□□□□□ -1.86
HOXD13P35453 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
HOXD13P35453 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
HOXD13P35453 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.46□□□□□ -1.86
HOXD13P35453 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
HOXD13P35453 RNU5E-5P-201ENST00000365379 116 ntBASIC3.45□□□□□ -1.86
HOXD13P35453 RNU6-1035P-201ENST00000384477 107 ntBASIC3.45□□□□□ -1.86
HOXD13P35453 AL359634.1-202ENST00000404721 284 ntBASIC3.45□□□□□ -1.86
HOXD13P35453 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.45□□□□□ -1.86
HOXD13P35453 RNU2-33P-201ENST00000410344 192 ntBASIC3.45□□□□□ -1.86
HOXD13P35453 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC3.45□□□□□ -1.86
HOXD13P35453 RPL7P8-201ENST00000411964 730 ntBASIC3.45□□□□□ -1.86
HOXD13P35453 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
HOXD13P35453 HSPE1P1-201ENST00000421494 318 ntBASIC3.45□□□□□ -1.86
HOXD13P35453 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.45□□□□□ -1.86
HOXD13P35453 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.45□□□□□ -1.86
HOXD13P35453 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC3.45□□□□□ -1.86
HOXD13P35453 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.45□□□□□ -1.86
HOXD13P35453 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.45□□□□□ -1.86
HOXD13P35453 PIGFP3-201ENST00000441918 722 ntBASIC3.45□□□□□ -1.86
HOXD13P35453 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.45□□□□□ -1.86
HOXD13P35453 AC020550.1-201ENST00000447385 163 ntBASIC3.45□□□□□ -1.86
HOXD13P35453 SNRPGP6-201ENST00000451124 220 ntBASIC3.45□□□□□ -1.86
HOXD13P35453 KATNBL1P6-201ENST00000453433 915 ntBASIC3.45□□□□□ -1.86
HOXD13P35453 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC3.45□□□□□ -1.86
HOXD13P35453 BX510359.1-201ENST00000456973 237 ntBASIC3.45□□□□□ -1.86
HOXD13P35453 AL031183.1-201ENST00000457667 207 ntBASIC3.45□□□□□ -1.86
HOXD13P35453 AC013267.1-201ENST00000458227 267 ntBASIC3.45□□□□□ -1.86
HOXD13P35453 SETP11-201ENST00000473027 690 ntBASIC3.45□□□□□ -1.86
HOXD13P35453 AC109925.1-201ENST00000478069 331 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 160.9 ms