Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 AL158042.1-201ENST00000605338 460 ntBASIC2.6□□□□□ -1.99
SHMT2P34897 AC090186.1-201ENST00000605991 572 ntBASIC2.6□□□□□ -1.99
SHMT2P34897 AC027449.1-201ENST00000608890 407 ntBASIC2.6□□□□□ -1.99
SHMT2P34897 AC092106.3-201ENST00000611308 722 ntBASIC2.6□□□□□ -1.99
SHMT2P34897 MIR3670-4-201ENST00000612260 65 ntBASIC2.6□□□□□ -1.99
SHMT2P34897 MIR6076-201ENST00000617521 113 ntBASIC2.6□□□□□ -1.99
SHMT2P34897 AP003485.2-201ENST00000623636 610 ntBASIC2.6□□□□□ -1.99
SHMT2P34897 CR381653.2-201ENST00000624041 768 ntBASIC2.6□□□□□ -1.99
SHMT2P34897 AC011460.1-201ENST00000636268 1834 ntBASIC2.6□□□□□ -1.99
SHMT2P34897 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
SHMT2P34897 AC092447.10-201ENST00000620607 1652 ntBASIC2.6□□□□□ -1.99
SHMT2P34897 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
SHMT2P34897 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.59□□□□□ -1.99
SHMT2P34897 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
SHMT2P34897 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
SHMT2P34897 RNU5E-8P-201ENST00000363502 116 ntBASIC2.59□□□□□ -1.99
SHMT2P34897 RNU6-744P-201ENST00000365557 107 ntBASIC2.59□□□□□ -1.99
SHMT2P34897 RNU6-1316P-201ENST00000384242 108 ntBASIC2.59□□□□□ -1.99
SHMT2P34897 SNORA1.3-201ENST00000384676 136 ntBASIC2.59□□□□□ -1.99
SHMT2P34897 MIR592-201ENST00000384959 97 ntBASIC2.59□□□□□ -1.99
SHMT2P34897 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
SHMT2P34897 RNU6-757P-201ENST00000410334 100 ntBASIC2.59□□□□□ -1.99
SHMT2P34897 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC2.59□□□□□ -1.99
SHMT2P34897 NUP35P1-201ENST00000422734 947 ntBASIC2.59□□□□□ -1.99
SHMT2P34897 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.59□□□□□ -1.99
SHMT2P34897 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.59□□□□□ -1.99
SHMT2P34897 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.59□□□□□ -1.99
SHMT2P34897 AL592447.1-201ENST00000447592 540 ntBASIC2.59□□□□□ -1.99
SHMT2P34897 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.59□□□□□ -1.99
SHMT2P34897 AC104563.1-201ENST00000476147 376 ntBASIC2.59□□□□□ -1.99
SHMT2P34897 KC877373.1-201ENST00000479066 408 ntBASIC2.59□□□□□ -1.99
SHMT2P34897 RPL30P14-201ENST00000482744 348 ntBASIC2.59□□□□□ -1.99
SHMT2P34897 AC021382.1-201ENST00000483523 359 ntBASIC2.59□□□□□ -1.99
SHMT2P34897 FAM172BP-201ENST00000487497 1089 ntBASIC2.59□□□□□ -1.99
SHMT2P34897 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
SHMT2P34897 AL359273.1-201ENST00000510918 627 ntBASIC2.59□□□□□ -1.99
SHMT2P34897 AC090136.1-201ENST00000520009 240 ntBASIC2.59□□□□□ -1.99
SHMT2P34897 CASP1P1-201ENST00000526345 212 ntBASIC2.59□□□□□ -1.99
SHMT2P34897 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.59□□□□□ -1.99
SHMT2P34897 AC011260.1-201ENST00000578420 472 ntBASIC2.59□□□□□ -1.99
SHMT2P34897 AL356575.1-201ENST00000603008 283 ntBASIC2.59□□□□□ -1.99
SHMT2P34897 AL596327.1-201ENST00000603629 213 ntBASIC2.59□□□□□ -1.99
SHMT2P34897 HSPE1P7-201ENST00000604681 321 ntBASIC2.59□□□□□ -1.99
SHMT2P34897 AC004067.1-201ENST00000608733 700 ntBASIC2.59□□□□□ -1.99
SHMT2P34897 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.59□□□□□ -1.99
SHMT2P34897 AC090132.2-201ENST00000615881 347 ntBASIC2.59□□□□□ -1.99
SHMT2P34897 AC008443.7-201ENST00000622195 246 ntBASIC2.59□□□□□ -1.99
SHMT2P34897 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC2.59□□□□□ -1.99
SHMT2P34897 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC2.59□□□□□ -1.99
SHMT2P34897 AC006927.4-201ENST00000639187 543 ntBASIC2.59□□□□□ -1.99
SHMT2P34897 AC008568.2-201ENST00000623862 2313 ntBASIC2.59□□□□□ -2
SHMT2P34897 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.59□□□□□ -2
SHMT2P34897 MTCO1P9-201ENST00000505577 1534 ntBASIC2.58□□□□□ -2
SHMT2P34897 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
SHMT2P34897 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
SHMT2P34897 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.58□□□□□ -2
SHMT2P34897 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.58□□□□□ -2
SHMT2P34897 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
SHMT2P34897 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
SHMT2P34897 Y_RNA.111-201ENST00000363248 100 ntBASIC2.58□□□□□ -2
SHMT2P34897 RNU6-97P-201ENST00000363387 104 ntBASIC2.58□□□□□ -2
SHMT2P34897 SNORA4.1-201ENST00000364263 144 ntBASIC2.58□□□□□ -2
SHMT2P34897 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.58□□□□□ -2
SHMT2P34897 RNU6-157P-201ENST00000383957 107 ntBASIC2.58□□□□□ -2
SHMT2P34897 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.58□□□□□ -2
SHMT2P34897 RAP1BP1-201ENST00000412709 553 ntBASIC2.58□□□□□ -2
SHMT2P34897 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC2.58□□□□□ -2
SHMT2P34897 ARL5AP4-201ENST00000430731 512 ntBASIC2.58□□□□□ -2
SHMT2P34897 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC2.58□□□□□ -2
SHMT2P34897 CR769776.1-201ENST00000441254 787 ntBASIC2.58□□□□□ -2
SHMT2P34897 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.58□□□□□ -2
SHMT2P34897 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.58□□□□□ -2
SHMT2P34897 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.58□□□□□ -2
SHMT2P34897 AL049714.1-201ENST00000466686 347 ntBASIC2.58□□□□□ -2
SHMT2P34897 RPL31P60-201ENST00000478450 367 ntBASIC2.58□□□□□ -2
SHMT2P34897 HSPE1P6-201ENST00000479457 291 ntBASIC2.58□□□□□ -2
SHMT2P34897 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC2.58□□□□□ -2
SHMT2P34897 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.58□□□□□ -2
SHMT2P34897 RNU6-798P-201ENST00000516912 103 ntBASIC2.58□□□□□ -2
SHMT2P34897 AC105185.1-201ENST00000518705 535 ntBASIC2.58□□□□□ -2
SHMT2P34897 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.58□□□□□ -2
SHMT2P34897 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.58□□□□□ -2
SHMT2P34897 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC2.58□□□□□ -2
SHMT2P34897 HMGB1P6-201ENST00000569046 646 ntBASIC2.58□□□□□ -2
SHMT2P34897 MIR4635-201ENST00000583759 79 ntBASIC2.58□□□□□ -2
SHMT2P34897 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC2.58□□□□□ -2
SHMT2P34897 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC2.58□□□□□ -2
SHMT2P34897 AC007998.5-201ENST00000622938 237 ntBASIC2.58□□□□□ -2
SHMT2P34897 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC2.58□□□□□ -2
SHMT2P34897 AC092608.2-201ENST00000624427 218 ntBASIC2.58□□□□□ -2
SHMT2P34897 AC079228.1-201ENST00000624774 1049 ntBASIC2.58□□□□□ -2
SHMT2P34897 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC2.58□□□□□ -2
SHMT2P34897 AC099654.7-201ENST00000635788 2127 ntBASIC2.58□□□□□ -2
SHMT2P34897 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.58□□□□□ -2
SHMT2P34897 AP000526.1-201ENST00000603308 1388 ntBASIC2.58□□□□□ -2
SHMT2P34897 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.58□□□□□ -2
SHMT2P34897 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
SHMT2P34897 AC087359.1-201ENST00000508335 1740 ntBASIC2.57□□□□□ -2
SHMT2P34897 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
SHMT2P34897 CD24P4-201ENST00000382840 243 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms