Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 MIR8059-201ENST00000620427 81 ntBASIC4.28□□□□□ -1.72
XPAP23025 RMST_7.1-201ENST00000621935 268 ntBASIC4.28□□□□□ -1.72
XPAP23025 AL353748.2-201ENST00000622148 471 ntBASIC4.28□□□□□ -1.72
XPAP23025 AL445363.3-201ENST00000623080 671 ntBASIC4.28□□□□□ -1.72
XPAP23025 AC110801.1-201ENST00000623590 212 ntBASIC4.28□□□□□ -1.72
XPAP23025 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.28□□□□□ -1.72
XPAP23025 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.28□□□□□ -1.72
XPAP23025 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.28□□□□□ -1.72
XPAP23025 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
XPAP23025 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
XPAP23025 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
XPAP23025 AC116096.1-201ENST00000566804 2314 ntBASIC4.27□□□□□ -1.73
XPAP23025 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
XPAP23025 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.27□□□□□ -1.73
XPAP23025 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
XPAP23025 API5P2-201ENST00000397055 1498 ntBASIC4.27□□□□□ -1.73
XPAP23025 RNU1-20P-201ENST00000363314 162 ntBASIC4.27□□□□□ -1.73
XPAP23025 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.27□□□□□ -1.73
XPAP23025 RNU6-946P-201ENST00000383878 107 ntBASIC4.27□□□□□ -1.73
XPAP23025 RNU6-831P-201ENST00000384548 107 ntBASIC4.27□□□□□ -1.73
XPAP23025 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
XPAP23025 SNORD66.1-201ENST00000391230 76 ntBASIC4.27□□□□□ -1.73
XPAP23025 MIR1179-201ENST00000408703 91 ntBASIC4.27□□□□□ -1.73
XPAP23025 AC108032.1-201ENST00000416706 207 ntBASIC4.27□□□□□ -1.73
XPAP23025 AC009161.1-201ENST00000417306 376 ntBASIC4.27□□□□□ -1.73
XPAP23025 PPP1R11P2-201ENST00000423543 382 ntBASIC4.27□□□□□ -1.73
XPAP23025 RAC1P6-201ENST00000423911 575 ntBASIC4.27□□□□□ -1.73
XPAP23025 AC079780.1-201ENST00000428259 207 ntBASIC4.27□□□□□ -1.73
XPAP23025 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC4.27□□□□□ -1.73
XPAP23025 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.27□□□□□ -1.73
XPAP23025 CYCSP43-201ENST00000438233 310 ntBASIC4.27□□□□□ -1.73
XPAP23025 AL359073.1-201ENST00000448036 403 ntBASIC4.27□□□□□ -1.73
XPAP23025 RNU6-329P-201ENST00000459618 107 ntBASIC4.27□□□□□ -1.73
XPAP23025 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC4.27□□□□□ -1.73
XPAP23025 AC007547.1-201ENST00000462177 490 ntBASIC4.27□□□□□ -1.73
XPAP23025 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
XPAP23025 RN7SL691P-201ENST00000494487 301 ntBASIC4.27□□□□□ -1.73
XPAP23025 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
XPAP23025 MTCO3P9-201ENST00000506989 781 ntBASIC4.27□□□□□ -1.73
XPAP23025 AC021146.3-201ENST00000511911 260 ntBASIC4.27□□□□□ -1.73
XPAP23025 MIR2116-201ENST00000517221 80 ntBASIC4.27□□□□□ -1.73
XPAP23025 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.27□□□□□ -1.73
XPAP23025 RPL7P20-201ENST00000520308 745 ntBASIC4.27□□□□□ -1.73
XPAP23025 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC4.27□□□□□ -1.73
XPAP23025 AC011611.1-201ENST00000552179 197 ntBASIC4.27□□□□□ -1.73
XPAP23025 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC4.27□□□□□ -1.73
XPAP23025 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.27□□□□□ -1.73
XPAP23025 BNIP3P5-201ENST00000562290 498 ntBASIC4.27□□□□□ -1.73
XPAP23025 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.27□□□□□ -1.73
XPAP23025 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.27□□□□□ -1.73
XPAP23025 AL442067.2-201ENST00000614033 363 ntBASIC4.27□□□□□ -1.73
XPAP23025 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.27□□□□□ -1.73
XPAP23025 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.27□□□□□ -1.73
XPAP23025 AC019278.1-201ENST00000623516 479 ntBASIC4.27□□□□□ -1.73
XPAP23025 AL133216.2-202ENST00000634512 349 ntBASIC4.27□□□□□ -1.73
XPAP23025 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC4.27□□□□□ -1.73
XPAP23025 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
XPAP23025 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
XPAP23025 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.27□□□□□ -1.73
XPAP23025 MARK2P15-201ENST00000432204 2186 ntBASIC4.27□□□□□ -1.73
XPAP23025 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
XPAP23025 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
XPAP23025 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.27□□□□□ -1.73
XPAP23025 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
XPAP23025 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
XPAP23025 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
XPAP23025 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.27□□□□□ -1.73
XPAP23025 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
XPAP23025 USP8P1-201ENST00000494673 3183 ntBASIC4.26□□□□□ -1.73
XPAP23025 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
XPAP23025 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.26□□□□□ -1.73
XPAP23025 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
XPAP23025 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
XPAP23025 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC4.26□□□□□ -1.73
XPAP23025 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
XPAP23025 Y_RNA.378-201ENST00000365652 113 ntBASIC4.26□□□□□ -1.73
XPAP23025 RNU6-629P-201ENST00000384061 103 ntBASIC4.26□□□□□ -1.73
XPAP23025 RNU6-510P-201ENST00000391239 108 ntBASIC4.26□□□□□ -1.73
XPAP23025 RNU4-26P-201ENST00000410270 107 ntBASIC4.26□□□□□ -1.73
XPAP23025 RNU2-37P-201ENST00000410695 177 ntBASIC4.26□□□□□ -1.73
XPAP23025 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.26□□□□□ -1.73
XPAP23025 HMGB3P11-201ENST00000440127 604 ntBASIC4.26□□□□□ -1.73
XPAP23025 AC020550.1-201ENST00000447385 163 ntBASIC4.26□□□□□ -1.73
XPAP23025 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.26□□□□□ -1.73
XPAP23025 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.26□□□□□ -1.73
XPAP23025 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.26□□□□□ -1.73
XPAP23025 SNRPFP3-201ENST00000457792 225 ntBASIC4.26□□□□□ -1.73
XPAP23025 RPL21P104-201ENST00000464143 478 ntBASIC4.26□□□□□ -1.73
XPAP23025 RPL7P19-201ENST00000469948 618 ntBASIC4.26□□□□□ -1.73
XPAP23025 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC4.26□□□□□ -1.73
XPAP23025 RN7SL432P-201ENST00000484057 298 ntBASIC4.26□□□□□ -1.73
XPAP23025 AF213884.1-201ENST00000488102 463 ntBASIC4.26□□□□□ -1.73
XPAP23025 AP001086.1-201ENST00000494882 321 ntBASIC4.26□□□□□ -1.73
XPAP23025 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC4.26□□□□□ -1.73
XPAP23025 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.26□□□□□ -1.73
XPAP23025 RNU6-390P-201ENST00000516259 103 ntBASIC4.26□□□□□ -1.73
XPAP23025 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.26□□□□□ -1.73
XPAP23025 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.26□□□□□ -1.73
XPAP23025 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC4.26□□□□□ -1.73
XPAP23025 AC026464.5-201ENST00000562497 722 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms