Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 MIR1179-201ENST00000408703 91 ntBASIC4.46□□□□□ -1.7
PTPN1P18031 RPL30P2-201ENST00000414021 291 ntBASIC4.46□□□□□ -1.7
PTPN1P18031 CALM2P2-201ENST00000428512 440 ntBASIC4.46□□□□□ -1.7
PTPN1P18031 AC004975.1-201ENST00000428733 208 ntBASIC4.46□□□□□ -1.7
PTPN1P18031 GAPDHP27-201ENST00000447427 1020 ntBASIC4.46□□□□□ -1.7
PTPN1P18031 NUTF2P7-201ENST00000453086 375 ntBASIC4.46□□□□□ -1.7
PTPN1P18031 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC4.46□□□□□ -1.7
PTPN1P18031 AC010469.1-201ENST00000463864 576 ntBASIC4.46□□□□□ -1.7
PTPN1P18031 RPL21P8-201ENST00000465083 535 ntBASIC4.46□□□□□ -1.7
PTPN1P18031 AC010631.1-201ENST00000474150 156 ntBASIC4.46□□□□□ -1.7
PTPN1P18031 AF213884.1-201ENST00000488102 463 ntBASIC4.46□□□□□ -1.7
PTPN1P18031 AC098591.2-201ENST00000510152 315 ntBASIC4.46□□□□□ -1.7
PTPN1P18031 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.46□□□□□ -1.7
PTPN1P18031 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC4.46□□□□□ -1.7
PTPN1P18031 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.46□□□□□ -1.7
PTPN1P18031 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.46□□□□□ -1.7
PTPN1P18031 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC4.46□□□□□ -1.7
PTPN1P18031 AC093249.1-201ENST00000567049 203 ntBASIC4.46□□□□□ -1.7
PTPN1P18031 MTND6P33-201ENST00000571794 183 ntBASIC4.46□□□□□ -1.7
PTPN1P18031 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC4.46□□□□□ -1.7
PTPN1P18031 POLR3GP2-201ENST00000588366 668 ntBASIC4.46□□□□□ -1.7
PTPN1P18031 AF038458.1-201ENST00000588406 262 ntBASIC4.46□□□□□ -1.7
PTPN1P18031 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC4.46□□□□□ -1.7
PTPN1P18031 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.46□□□□□ -1.7
PTPN1P18031 BNIP3P22-201ENST00000593399 556 ntBASIC4.46□□□□□ -1.7
PTPN1P18031 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC4.46□□□□□ -1.7
PTPN1P18031 AL589994.2-201ENST00000621124 579 ntBASIC4.46□□□□□ -1.7
PTPN1P18031 AC110801.1-201ENST00000623590 212 ntBASIC4.46□□□□□ -1.7
PTPN1P18031 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.46□□□□□ -1.7
PTPN1P18031 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC4.46□□□□□ -1.7
PTPN1P18031 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PTPN1P18031 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.46□□□□□ -1.7
PTPN1P18031 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
PTPN1P18031 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PTPN1P18031 AC074029.4-201ENST00000624796 1859 ntBASIC4.45□□□□□ -1.7
PTPN1P18031 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PTPN1P18031 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.45□□□□□ -1.7
PTPN1P18031 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PTPN1P18031 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
PTPN1P18031 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PTPN1P18031 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
PTPN1P18031 RNU6-1249P-201ENST00000363237 111 ntBASIC4.45□□□□□ -1.7
PTPN1P18031 RNU6-82P-201ENST00000363970 107 ntBASIC4.45□□□□□ -1.7
PTPN1P18031 SMIM11P1-201ENST00000369586 178 ntBASIC4.45□□□□□ -1.7
PTPN1P18031 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.45□□□□□ -1.7
PTPN1P18031 RNU6-946P-201ENST00000383878 107 ntBASIC4.45□□□□□ -1.7
PTPN1P18031 RNU6-1297P-201ENST00000384415 104 ntBASIC4.45□□□□□ -1.7
PTPN1P18031 RNU6-550P-201ENST00000391057 101 ntBASIC4.45□□□□□ -1.7
PTPN1P18031 MTCO2P27-201ENST00000420740 428 ntBASIC4.45□□□□□ -1.7
PTPN1P18031 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC4.45□□□□□ -1.7
PTPN1P18031 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.45□□□□□ -1.7
PTPN1P18031 RPL23AP46-201ENST00000438548 490 ntBASIC4.45□□□□□ -1.7
PTPN1P18031 RNA5SP246-201ENST00000458909 119 ntBASIC4.45□□□□□ -1.7
PTPN1P18031 Y_RNA.635-201ENST00000459041 101 ntBASIC4.45□□□□□ -1.7
PTPN1P18031 AC096576.1-201ENST00000489014 359 ntBASIC4.45□□□□□ -1.7
PTPN1P18031 RNU6-559P-201ENST00000516151 98 ntBASIC4.45□□□□□ -1.7
PTPN1P18031 SNORA25.17-201ENST00000517184 124 ntBASIC4.45□□□□□ -1.7
PTPN1P18031 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.45□□□□□ -1.7
PTPN1P18031 RANP3-201ENST00000530970 276 ntBASIC4.45□□□□□ -1.7
PTPN1P18031 AP000763.2-201ENST00000540641 163 ntBASIC4.45□□□□□ -1.7
PTPN1P18031 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC4.45□□□□□ -1.7
PTPN1P18031 FRG2DP-202ENST00000566967 323 ntBASIC4.45□□□□□ -1.7
PTPN1P18031 MIR3942-201ENST00000585264 109 ntBASIC4.45□□□□□ -1.7
PTPN1P18031 AP001330.4-201ENST00000604350 154 ntBASIC4.45□□□□□ -1.7
PTPN1P18031 AL591034.3-201ENST00000605511 685 ntBASIC4.45□□□□□ -1.7
PTPN1P18031 AC015813.4-201ENST00000610469 179 ntBASIC4.45□□□□□ -1.7
PTPN1P18031 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.45□□□□□ -1.7
PTPN1P18031 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.45□□□□□ -1.7
PTPN1P18031 AC090971.5-201ENST00000621102 293 ntBASIC4.45□□□□□ -1.7
PTPN1P18031 AL139811.1-201ENST00000424779 2299 ntBASIC4.45□□□□□ -1.7
PTPN1P18031 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PTPN1P18031 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PTPN1P18031 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.45□□□□□ -1.7
PTPN1P18031 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
PTPN1P18031 AC090229.1-201ENST00000590983 1609 ntBASIC4.45□□□□□ -1.7
PTPN1P18031 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PTPN1P18031 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PTPN1P18031 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PTPN1P18031 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PTPN1P18031 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
PTPN1P18031 MTND5P3-201ENST00000438536 1800 ntBASIC4.44□□□□□ -1.7
PTPN1P18031 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
PTPN1P18031 SNORD113-7-201ENST00000363762 77 ntBASIC4.44□□□□□ -1.7
PTPN1P18031 RNA5SP479-201ENST00000364858 117 ntBASIC4.44□□□□□ -1.7
PTPN1P18031 AL022722.2-201ENST00000402519 180 ntBASIC4.44□□□□□ -1.7
PTPN1P18031 RNU6-712P-201ENST00000410558 100 ntBASIC4.44□□□□□ -1.7
PTPN1P18031 OFD1P1Y-201ENST00000411756 1225 ntBASIC4.44□□□□□ -1.7
PTPN1P18031 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PTPN1P18031 RPS23P10-201ENST00000416185 486 ntBASIC4.44□□□□□ -1.7
PTPN1P18031 AC099677.1-201ENST00000420575 175 ntBASIC4.44□□□□□ -1.7
PTPN1P18031 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.44□□□□□ -1.7
PTPN1P18031 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.44□□□□□ -1.7
PTPN1P18031 BRK1P2-201ENST00000442875 223 ntBASIC4.44□□□□□ -1.7
PTPN1P18031 AC020550.1-201ENST00000447385 163 ntBASIC4.44□□□□□ -1.7
PTPN1P18031 RPL5P30-201ENST00000465511 891 ntBASIC4.44□□□□□ -1.7
PTPN1P18031 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.44□□□□□ -1.7
PTPN1P18031 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC4.44□□□□□ -1.7
PTPN1P18031 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PTPN1P18031 RBBP4P6-201ENST00000508098 202 ntBASIC4.44□□□□□ -1.7
PTPN1P18031 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms