Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC1.5□□□□□ -2.17
CXCL1P09341 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.5□□□□□ -2.17
CXCL1P09341 AC024614.2-201ENST00000577584 372 ntBASIC1.5□□□□□ -2.17
CXCL1P09341 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC1.5□□□□□ -2.17
CXCL1P09341 AC078899.2-201ENST00000595282 212 ntBASIC1.5□□□□□ -2.17
CXCL1P09341 AC012468.1-201ENST00000604888 430 ntBASIC1.5□□□□□ -2.17
CXCL1P09341 AC007938.3-201ENST00000604965 623 ntBASIC1.5□□□□□ -2.17
CXCL1P09341 AL627230.6-201ENST00000611129 280 ntBASIC1.5□□□□□ -2.17
CXCL1P09341 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
CXCL1P09341 MIR7157-201ENST00000635801 60 ntBASIC1.5□□□□□ -2.17
CXCL1P09341 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC1.5□□□□□ -2.17
CXCL1P09341 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.5□□□□□ -2.17
CXCL1P09341 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC1.5□□□□□ -2.17
CXCL1P09341 AL390862.1-201ENST00000635467 1469 ntBASIC1.5□□□□□ -2.17
CXCL1P09341 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
CXCL1P09341 SGO1P1-201ENST00000603525 1447 ntBASIC1.49□□□□□ -2.17
CXCL1P09341 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
CXCL1P09341 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.49□□□□□ -2.17
CXCL1P09341 GNG5P1-201ENST00000255500 204 ntBASIC1.49□□□□□ -2.17
CXCL1P09341 RNU6-217P-201ENST00000384164 104 ntBASIC1.49□□□□□ -2.17
CXCL1P09341 MIR128-1-201ENST00000384921 82 ntBASIC1.49□□□□□ -2.17
CXCL1P09341 RPS4XP8-201ENST00000402039 771 ntBASIC1.49□□□□□ -2.17
CXCL1P09341 AL589655.1-201ENST00000405398 482 ntBASIC1.49□□□□□ -2.17
CXCL1P09341 BTF3P7-201ENST00000407097 488 ntBASIC1.49□□□□□ -2.17
CXCL1P09341 RPS20P15-201ENST00000412792 311 ntBASIC1.49□□□□□ -2.17
CXCL1P09341 PGBD4P6-201ENST00000421501 610 ntBASIC1.49□□□□□ -2.17
CXCL1P09341 EIF4EP4-201ENST00000424916 578 ntBASIC1.49□□□□□ -2.17
CXCL1P09341 AC092017.2-201ENST00000427600 362 ntBASIC1.49□□□□□ -2.17
CXCL1P09341 AC005345.1-201ENST00000431868 217 ntBASIC1.49□□□□□ -2.17
CXCL1P09341 IFNA20P-201ENST00000436840 528 ntBASIC1.49□□□□□ -2.17
CXCL1P09341 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.49□□□□□ -2.17
CXCL1P09341 AC092170.1-201ENST00000440211 356 ntBASIC1.49□□□□□ -2.17
CXCL1P09341 MRPS17P3-201ENST00000465453 385 ntBASIC1.49□□□□□ -2.17
CXCL1P09341 BZW1P2-201ENST00000473537 826 ntBASIC1.49□□□□□ -2.17
CXCL1P09341 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.49□□□□□ -2.17
CXCL1P09341 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
CXCL1P09341 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC1.49□□□□□ -2.17
CXCL1P09341 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC1.49□□□□□ -2.17
CXCL1P09341 SNORA70.24-201ENST00000517233 118 ntBASIC1.49□□□□□ -2.17
CXCL1P09341 RNU2-19P-201ENST00000517288 84 ntBASIC1.49□□□□□ -2.17
CXCL1P09341 AP001646.1-201ENST00000527936 915 ntBASIC1.49□□□□□ -2.17
CXCL1P09341 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC1.49□□□□□ -2.17
CXCL1P09341 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC1.49□□□□□ -2.17
CXCL1P09341 AC124947.2-202ENST00000552735 133 ntBASIC1.49□□□□□ -2.17
CXCL1P09341 MEG8-218ENST00000556720 456 ntTSL 3 BASIC1.49□□□□□ -2.17
CXCL1P09341 AC026464.5-201ENST00000562497 722 ntBASIC1.49□□□□□ -2.17
CXCL1P09341 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC1.49□□□□□ -2.17
CXCL1P09341 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.49□□□□□ -2.17
CXCL1P09341 HMGN2P15-201ENST00000585707 270 ntBASIC1.49□□□□□ -2.17
CXCL1P09341 AL161729.4-201ENST00000604650 476 ntBASIC1.49□□□□□ -2.17
CXCL1P09341 AP001033.2-201ENST00000609701 1003 ntBASIC1.49□□□□□ -2.17
CXCL1P09341 AC008498.1-201ENST00000613012 531 ntBASIC1.49□□□□□ -2.17
CXCL1P09341 AC068057.2-201ENST00000624047 895 ntBASIC1.49□□□□□ -2.17
CXCL1P09341 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
CXCL1P09341 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.49□□□□□ -2.17
CXCL1P09341 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC1.49□□□□□ -2.17
CXCL1P09341 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC1.49□□□□□ -2.17
CXCL1P09341 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC1.48□□□□□ -2.17
CXCL1P09341 AC131280.1-202ENST00000624067 4211 ntBASIC1.48□□□□□ -2.17
CXCL1P09341 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
CXCL1P09341 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
CXCL1P09341 RNU5A-1-201ENST00000362698 116 ntBASIC1.48□□□□□ -2.17
CXCL1P09341 SNORD48-201ENST00000364953 64 ntBASIC1.48□□□□□ -2.17
CXCL1P09341 SNORD51.1-201ENST00000365405 77 ntBASIC1.48□□□□□ -2.17
CXCL1P09341 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.48□□□□□ -2.17
CXCL1P09341 RNU1-73P-201ENST00000383971 164 ntBASIC1.48□□□□□ -2.17
CXCL1P09341 RNU6-878P-201ENST00000384578 110 ntBASIC1.48□□□□□ -2.17
CXCL1P09341 MIR16-1-201ENST00000385271 89 ntBASIC1.48□□□□□ -2.17
CXCL1P09341 RNU6-750P-201ENST00000390946 107 ntBASIC1.48□□□□□ -2.17
CXCL1P09341 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
CXCL1P09341 AL450338.1-201ENST00000407987 512 ntBASIC1.48□□□□□ -2.17
CXCL1P09341 SNORA11.4-201ENST00000408823 129 ntBASIC1.48□□□□□ -2.17
CXCL1P09341 RNU2-47P-201ENST00000410649 186 ntBASIC1.48□□□□□ -2.17
CXCL1P09341 AC096664.2-201ENST00000411843 406 ntBASIC1.48□□□□□ -2.17
CXCL1P09341 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC1.48□□□□□ -2.17
CXCL1P09341 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC1.48□□□□□ -2.17
CXCL1P09341 ZDHHC20P2-201ENST00000424108 429 ntBASIC1.48□□□□□ -2.17
CXCL1P09341 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC1.48□□□□□ -2.17
CXCL1P09341 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
CXCL1P09341 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC1.48□□□□□ -2.17
CXCL1P09341 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC1.48□□□□□ -2.17
CXCL1P09341 AC025750.2-201ENST00000442609 450 ntBASIC1.48□□□□□ -2.17
CXCL1P09341 DDX3P2-201ENST00000446138 111 ntBASIC1.48□□□□□ -2.17
CXCL1P09341 AC108938.1-201ENST00000451204 136 ntBASIC1.48□□□□□ -2.17
CXCL1P09341 HGF-207ENST00000453018 721 ntTSL 3 BASIC1.48□□□□□ -2.17
CXCL1P09341 AP1S2P1-201ENST00000457344 379 ntBASIC1.48□□□□□ -2.17
CXCL1P09341 AC080013.2-201ENST00000460866 323 ntBASIC1.48□□□□□ -2.17
CXCL1P09341 AC092757.1-201ENST00000467293 467 ntBASIC1.48□□□□□ -2.17
CXCL1P09341 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.48□□□□□ -2.17
CXCL1P09341 AC068781.1-201ENST00000488231 618 ntBASIC1.48□□□□□ -2.17
CXCL1P09341 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
CXCL1P09341 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC1.48□□□□□ -2.17
CXCL1P09341 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.48□□□□□ -2.17
CXCL1P09341 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC1.48□□□□□ -2.17
CXCL1P09341 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.48□□□□□ -2.17
CXCL1P09341 AC027176.1-201ENST00000560204 514 ntBASIC1.48□□□□□ -2.17
CXCL1P09341 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
CXCL1P09341 DEFB122-202ENST00000569013 197 ntBASIC1.48□□□□□ -2.17
CXCL1P09341 MIR5089-201ENST00000580047 84 ntBASIC1.48□□□□□ -2.17
CXCL1P09341 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms