Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 RNU6-354P-201ENST00000383862 107 ntBASIC1.83□□□□□ -2.12
COL4A2P08572 RNU6-610P-201ENST00000384264 107 ntBASIC1.83□□□□□ -2.12
COL4A2P08572 RNU6-921P-201ENST00000384361 107 ntBASIC1.83□□□□□ -2.12
COL4A2P08572 RNU6-821P-201ENST00000390995 107 ntBASIC1.83□□□□□ -2.12
COL4A2P08572 AL023807.1-201ENST00000407932 359 ntBASIC1.83□□□□□ -2.12
COL4A2P08572 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC1.83□□□□□ -2.12
COL4A2P08572 AL035410.1-201ENST00000427409 427 ntBASIC1.83□□□□□ -2.12
COL4A2P08572 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC1.83□□□□□ -2.12
COL4A2P08572 SNRPEP4-201ENST00000435815 279 ntBASIC1.83□□□□□ -2.12
COL4A2P08572 HSPE1P28-201ENST00000443139 211 ntBASIC1.83□□□□□ -2.12
COL4A2P08572 AL050341.1-201ENST00000447743 313 ntBASIC1.83□□□□□ -2.12
COL4A2P08572 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.83□□□□□ -2.12
COL4A2P08572 ARPC3P2-201ENST00000457786 533 ntBASIC1.83□□□□□ -2.12
COL4A2P08572 AC109486.1-201ENST00000486833 374 ntBASIC1.83□□□□□ -2.12
COL4A2P08572 AC093767.1-201ENST00000504523 156 ntBASIC1.83□□□□□ -2.12
COL4A2P08572 MTND4LP22-201ENST00000508209 276 ntBASIC1.83□□□□□ -2.12
COL4A2P08572 RNU6-334P-201ENST00000517072 102 ntBASIC1.83□□□□□ -2.12
COL4A2P08572 AL136520.1-202ENST00000555494 763 ntBASIC1.83□□□□□ -2.12
COL4A2P08572 AC093510.2-201ENST00000562820 896 ntBASIC1.83□□□□□ -2.12
COL4A2P08572 AC093519.1-201ENST00000566109 298 ntBASIC1.83□□□□□ -2.12
COL4A2P08572 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC1.83□□□□□ -2.12
COL4A2P08572 OR4K7P-201ENST00000580232 945 ntBASIC1.83□□□□□ -2.12
COL4A2P08572 SNORD84-203ENST00000584275 78 ntBASIC1.83□□□□□ -2.12
COL4A2P08572 AL110115.1-201ENST00000614396 364 ntBASIC1.83□□□□□ -2.12
COL4A2P08572 AC018755.4-201ENST00000619715 454 ntBASIC1.83□□□□□ -2.12
COL4A2P08572 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
COL4A2P08572 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC1.82□□□□□ -2.12
COL4A2P08572 AC002546.1-201ENST00000588041 2504 ntBASIC1.82□□□□□ -2.12
COL4A2P08572 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC1.82□□□□□ -2.12
COL4A2P08572 RNU6-582P-201ENST00000362989 107 ntBASIC1.82□□□□□ -2.12
COL4A2P08572 RNU6-492P-201ENST00000363035 104 ntBASIC1.82□□□□□ -2.12
COL4A2P08572 RNY1P10-201ENST00000363268 113 ntBASIC1.82□□□□□ -2.12
COL4A2P08572 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
COL4A2P08572 RPL19P1-201ENST00000411635 428 ntBASIC1.82□□□□□ -2.12
COL4A2P08572 MTCO3P12-201ENST00000416718 547 ntBASIC1.82□□□□□ -2.12
COL4A2P08572 RPL21P32-201ENST00000419877 477 ntBASIC1.82□□□□□ -2.12
COL4A2P08572 AC009237.2-201ENST00000421358 284 ntBASIC1.82□□□□□ -2.12
COL4A2P08572 TRAPPC2P4-201ENST00000421750 331 ntBASIC1.82□□□□□ -2.12
COL4A2P08572 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC1.82□□□□□ -2.12
COL4A2P08572 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC1.82□□□□□ -2.12
COL4A2P08572 AC092634.2-201ENST00000428146 1010 ntBASIC1.82□□□□□ -2.12
COL4A2P08572 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
COL4A2P08572 AC093392.2-201ENST00000450682 337 ntBASIC1.82□□□□□ -2.12
COL4A2P08572 MRPL42P4-201ENST00000453267 443 ntBASIC1.82□□□□□ -2.12
COL4A2P08572 RNU7-95P-201ENST00000459222 64 ntBASIC1.82□□□□□ -2.12
COL4A2P08572 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.82□□□□□ -2.12
COL4A2P08572 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC1.82□□□□□ -2.12
COL4A2P08572 MTCO2P9-201ENST00000503214 694 ntBASIC1.82□□□□□ -2.12
COL4A2P08572 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC1.82□□□□□ -2.12
COL4A2P08572 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC1.82□□□□□ -2.12
COL4A2P08572 SNRPGP16-201ENST00000533275 226 ntBASIC1.82□□□□□ -2.12
COL4A2P08572 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC1.82□□□□□ -2.12
COL4A2P08572 AC090502.2-201ENST00000549267 280 ntBASIC1.82□□□□□ -2.12
COL4A2P08572 RPS3AP4-201ENST00000555161 764 ntBASIC1.82□□□□□ -2.12
COL4A2P08572 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC1.82□□□□□ -2.12
COL4A2P08572 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC1.82□□□□□ -2.12
COL4A2P08572 AC055876.5-201ENST00000605667 259 ntBASIC1.82□□□□□ -2.12
COL4A2P08572 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC1.82□□□□□ -2.12
COL4A2P08572 AP000943.4-201ENST00000622912 357 ntBASIC1.82□□□□□ -2.12
COL4A2P08572 AC073592.7-201ENST00000623659 507 ntBASIC1.82□□□□□ -2.12
COL4A2P08572 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.82□□□□□ -2.12
COL4A2P08572 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC1.82□□□□□ -2.12
COL4A2P08572 AC111188.2-201ENST00000529697 1387 ntBASIC1.82□□□□□ -2.12
COL4A2P08572 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.82□□□□□ -2.12
COL4A2P08572 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC1.81□□□□□ -2.12
COL4A2P08572 KPNA2P1-201ENST00000458289 1591 ntBASIC1.81□□□□□ -2.12
COL4A2P08572 RNU6-173P-201ENST00000364215 104 ntBASIC1.81□□□□□ -2.12
COL4A2P08572 SNORD116-23-201ENST00000384645 92 ntBASIC1.81□□□□□ -2.12
COL4A2P08572 RPL23AP47-201ENST00000408017 460 ntBASIC1.81□□□□□ -2.12
COL4A2P08572 RNU6-712P-201ENST00000410558 100 ntBASIC1.81□□□□□ -2.12
COL4A2P08572 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.81□□□□□ -2.12
COL4A2P08572 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC1.81□□□□□ -2.12
COL4A2P08572 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC1.81□□□□□ -2.12
COL4A2P08572 MTCYBP15-201ENST00000433123 1127 ntBASIC1.81□□□□□ -2.12
COL4A2P08572 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC1.81□□□□□ -2.12
COL4A2P08572 SSXP4-201ENST00000451349 245 ntBASIC1.81□□□□□ -2.12
COL4A2P08572 RPS29P12-201ENST00000460178 152 ntBASIC1.81□□□□□ -2.12
COL4A2P08572 AC013828.1-201ENST00000481845 158 ntBASIC1.81□□□□□ -2.12
COL4A2P08572 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC1.81□□□□□ -2.12
COL4A2P08572 RNU6-27P-201ENST00000516146 107 ntBASIC1.81□□□□□ -2.12
COL4A2P08572 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC1.81□□□□□ -2.12
COL4A2P08572 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC1.81□□□□□ -2.12
COL4A2P08572 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.81□□□□□ -2.12
COL4A2P08572 RN7SL622P-201ENST00000585292 275 ntBASIC1.81□□□□□ -2.12
COL4A2P08572 AC090330.1-201ENST00000588646 764 ntBASIC1.81□□□□□ -2.12
COL4A2P08572 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC1.81□□□□□ -2.12
COL4A2P08572 AC093875.1-201ENST00000623688 504 ntBASIC1.81□□□□□ -2.12
COL4A2P08572 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC1.81□□□□□ -2.12
COL4A2P08572 BX649567.1-201ENST00000642071 1134 ntBASIC1.81□□□□□ -2.12
COL4A2P08572 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC1.81□□□□□ -2.12
COL4A2P08572 AK9-203ENST00000368948 2478 ntTSL 5 BASIC1.8□□□□□ -2.12
COL4A2P08572 DBF4P1-201ENST00000412976 1892 ntBASIC1.8□□□□□ -2.12
COL4A2P08572 RNU6-339P-201ENST00000384310 107 ntBASIC1.8□□□□□ -2.12
COL4A2P08572 RNU1-101P-201ENST00000391171 127 ntBASIC1.8□□□□□ -2.12
COL4A2P08572 AL133264.1-201ENST00000407157 562 ntBASIC1.8□□□□□ -2.12
COL4A2P08572 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC1.8□□□□□ -2.12
COL4A2P08572 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC1.8□□□□□ -2.12
COL4A2P08572 RPL23AP58-201ENST00000440453 469 ntBASIC1.8□□□□□ -2.12
COL4A2P08572 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC1.8□□□□□ -2.12
COL4A2P08572 PABPC1P3-201ENST00000469174 459 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 147.6 ms