Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 AF131216.2-201ENST00000512316 564 ntBASIC2.9□□□□□ -1.95
MT-ND1P03886 AC116347.2-201ENST00000514912 523 ntBASIC2.9□□□□□ -1.95
MT-ND1P03886 AC025881.1-201ENST00000518851 512 ntBASIC2.9□□□□□ -1.95
MT-ND1P03886 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC2.9□□□□□ -1.95
MT-ND1P03886 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC2.9□□□□□ -1.95
MT-ND1P03886 AP000867.2-201ENST00000532468 320 ntBASIC2.9□□□□□ -1.95
MT-ND1P03886 AC083760.1-201ENST00000589621 670 ntBASIC2.9□□□□□ -1.95
MT-ND1P03886 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC2.9□□□□□ -1.95
MT-ND1P03886 AC119751.7-201ENST00000600494 245 ntBASIC2.9□□□□□ -1.95
MT-ND1P03886 PRELID3BP8-201ENST00000604148 295 ntBASIC2.9□□□□□ -1.95
MT-ND1P03886 NUTF2P8-201ENST00000604593 363 ntBASIC2.9□□□□□ -1.95
MT-ND1P03886 AL158063.1-201ENST00000615349 536 ntBASIC2.9□□□□□ -1.95
MT-ND1P03886 AC084035.1-201ENST00000634543 607 ntBASIC2.9□□□□□ -1.95
MT-ND1P03886 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
MT-ND1P03886 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
MT-ND1P03886 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.9□□□□□ -1.95
MT-ND1P03886 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.9□□□□□ -1.95
MT-ND1P03886 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.9□□□□□ -1.95
MT-ND1P03886 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.89□□□□□ -1.95
MT-ND1P03886 FAM35BP-202ENST00000497389 3337 ntBASIC2.89□□□□□ -1.95
MT-ND1P03886 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.89□□□□□ -1.95
MT-ND1P03886 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
MT-ND1P03886 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
MT-ND1P03886 Y_RNA.126-201ENST00000363382 111 ntBASIC2.89□□□□□ -1.95
MT-ND1P03886 RNU1-33P-201ENST00000364249 162 ntBASIC2.89□□□□□ -1.95
MT-ND1P03886 RNA5SP139-201ENST00000364340 117 ntBASIC2.89□□□□□ -1.95
MT-ND1P03886 RNU6-359P-201ENST00000365466 108 ntBASIC2.89□□□□□ -1.95
MT-ND1P03886 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
MT-ND1P03886 RNU6-76P-201ENST00000384060 104 ntBASIC2.89□□□□□ -1.95
MT-ND1P03886 MIR490-201ENST00000384865 128 ntBASIC2.89□□□□□ -1.95
MT-ND1P03886 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
MT-ND1P03886 AC093151.1-201ENST00000427711 313 ntBASIC2.89□□□□□ -1.95
MT-ND1P03886 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC2.89□□□□□ -1.95
MT-ND1P03886 MTND1P28-201ENST00000435623 950 ntBASIC2.89□□□□□ -1.95
MT-ND1P03886 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.89□□□□□ -1.95
MT-ND1P03886 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.89□□□□□ -1.95
MT-ND1P03886 AL360221.1-201ENST00000445989 335 ntBASIC2.89□□□□□ -1.95
MT-ND1P03886 SNRPGP6-201ENST00000451124 220 ntBASIC2.89□□□□□ -1.95
MT-ND1P03886 SNORD121B-201ENST00000458838 81 ntBASIC2.89□□□□□ -1.95
MT-ND1P03886 RPL21P10-201ENST00000463521 490 ntBASIC2.89□□□□□ -1.95
MT-ND1P03886 RPL7P5-201ENST00000471472 736 ntBASIC2.89□□□□□ -1.95
MT-ND1P03886 AP000797.1-201ENST00000478870 387 ntBASIC2.89□□□□□ -1.95
MT-ND1P03886 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.89□□□□□ -1.95
MT-ND1P03886 AC091965.2-201ENST00000512324 613 ntBASIC2.89□□□□□ -1.95
MT-ND1P03886 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC2.89□□□□□ -1.95
MT-ND1P03886 MTCO3P28-201ENST00000513351 515 ntBASIC2.89□□□□□ -1.95
MT-ND1P03886 RNU6-528P-201ENST00000516926 100 ntBASIC2.89□□□□□ -1.95
MT-ND1P03886 CASP1P1-201ENST00000526345 212 ntBASIC2.89□□□□□ -1.95
MT-ND1P03886 AP002748.2-201ENST00000528671 348 ntBASIC2.89□□□□□ -1.95
MT-ND1P03886 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC2.89□□□□□ -1.95
MT-ND1P03886 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.89□□□□□ -1.95
MT-ND1P03886 AC011611.1-201ENST00000552179 197 ntBASIC2.89□□□□□ -1.95
MT-ND1P03886 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC2.89□□□□□ -1.95
MT-ND1P03886 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.89□□□□□ -1.95
MT-ND1P03886 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC2.89□□□□□ -1.95
MT-ND1P03886 MIR5697-201ENST00000578045 78 ntBASIC2.89□□□□□ -1.95
MT-ND1P03886 AP001429.1-201ENST00000602568 530 ntBASIC2.89□□□□□ -1.95
MT-ND1P03886 AC112187.2-201ENST00000604345 283 ntBASIC2.89□□□□□ -1.95
MT-ND1P03886 AC091965.4-201ENST00000607691 587 ntBASIC2.89□□□□□ -1.95
MT-ND1P03886 AC002550.2-201ENST00000621246 394 ntBASIC2.89□□□□□ -1.95
MT-ND1P03886 AC012150.2-201ENST00000621300 544 ntBASIC2.89□□□□□ -1.95
MT-ND1P03886 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC2.89□□□□□ -1.95
MT-ND1P03886 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
MT-ND1P03886 MTND5P33-201ENST00000571250 1450 ntBASIC2.89□□□□□ -1.95
MT-ND1P03886 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC2.89□□□□□ -1.95
MT-ND1P03886 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.89□□□□□ -1.95
MT-ND1P03886 GABRG2-229ENST00000641017 3628 ntBASIC2.88□□□□□ -1.95
MT-ND1P03886 MTND4P4-201ENST00000439033 1366 ntBASIC2.88□□□□□ -1.95
MT-ND1P03886 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.88□□□□□ -1.95
MT-ND1P03886 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.88□□□□□ -1.95
MT-ND1P03886 AL390237.1-201ENST00000404226 1415 ntBASIC2.88□□□□□ -1.95
MT-ND1P03886 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
MT-ND1P03886 Y_RNA.51-201ENST00000362725 102 ntBASIC2.88□□□□□ -1.95
MT-ND1P03886 Y_RNA.77-201ENST00000362962 107 ntBASIC2.88□□□□□ -1.95
MT-ND1P03886 RNU6-97P-201ENST00000363387 104 ntBASIC2.88□□□□□ -1.95
MT-ND1P03886 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.88□□□□□ -1.95
MT-ND1P03886 RNU6-809P-201ENST00000384461 107 ntBASIC2.88□□□□□ -1.95
MT-ND1P03886 MIR200C-201ENST00000384980 68 ntBASIC2.88□□□□□ -1.95
MT-ND1P03886 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.88□□□□□ -1.95
MT-ND1P03886 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
MT-ND1P03886 RNA5SP344-201ENST00000411081 104 ntBASIC2.88□□□□□ -1.95
MT-ND1P03886 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC2.88□□□□□ -1.95
MT-ND1P03886 SLC44A3-AS1-205ENST00000424505 612 ntBASIC2.88□□□□□ -1.95
MT-ND1P03886 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC2.88□□□□□ -1.95
MT-ND1P03886 AC010153.1-201ENST00000432862 727 ntBASIC2.88□□□□□ -1.95
MT-ND1P03886 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.88□□□□□ -1.95
MT-ND1P03886 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.88□□□□□ -1.95
MT-ND1P03886 MTND1P29-201ENST00000448112 647 ntBASIC2.88□□□□□ -1.95
MT-ND1P03886 AC010099.1-201ENST00000455434 375 ntBASIC2.88□□□□□ -1.95
MT-ND1P03886 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
MT-ND1P03886 AC116337.2-201ENST00000477662 156 ntBASIC2.88□□□□□ -1.95
MT-ND1P03886 AC021382.1-201ENST00000483523 359 ntBASIC2.88□□□□□ -1.95
MT-ND1P03886 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.88□□□□□ -1.95
MT-ND1P03886 AC110794.1-201ENST00000505816 425 ntBASIC2.88□□□□□ -1.95
MT-ND1P03886 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC2.88□□□□□ -1.95
MT-ND1P03886 GMPSP1-201ENST00000514075 579 ntBASIC2.88□□□□□ -1.95
MT-ND1P03886 AC026801.2-201ENST00000515352 425 ntBASIC2.88□□□□□ -1.95
MT-ND1P03886 RNU6-798P-201ENST00000516912 103 ntBASIC2.88□□□□□ -1.95
MT-ND1P03886 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.88□□□□□ -1.95
MT-ND1P03886 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms