Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 MTND5P8-201ENST00000449817 1083 ntBASIC2.15□□□□□ -2.07
APOEP02649 AL513124.1-201ENST00000450410 614 ntBASIC2.15□□□□□ -2.07
APOEP02649 AL021397.1-201ENST00000451806 248 ntBASIC2.15□□□□□ -2.07
APOEP02649 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.15□□□□□ -2.07
APOEP02649 AC025033.1-201ENST00000463883 194 ntBASIC2.15□□□□□ -2.07
APOEP02649 AC108729.2-201ENST00000476543 840 ntBASIC2.15□□□□□ -2.07
APOEP02649 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC2.15□□□□□ -2.07
APOEP02649 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC2.15□□□□□ -2.07
APOEP02649 AC092436.1-201ENST00000506450 503 ntBASIC2.15□□□□□ -2.07
APOEP02649 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.15□□□□□ -2.07
APOEP02649 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.07
APOEP02649 IGKV3-31-201ENST00000523109 329 ntBASIC2.15□□□□□ -2.07
APOEP02649 SETP7-201ENST00000552169 453 ntBASIC2.15□□□□□ -2.07
APOEP02649 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC2.15□□□□□ -2.07
APOEP02649 AL355877.2-201ENST00000603670 358 ntBASIC2.15□□□□□ -2.07
APOEP02649 AL671309.1-201ENST00000603750 544 ntBASIC2.15□□□□□ -2.07
APOEP02649 AC013553.2-201ENST00000604244 589 ntBASIC2.15□□□□□ -2.07
APOEP02649 AC002487.1-201ENST00000604565 994 ntBASIC2.15□□□□□ -2.07
APOEP02649 AC120053.1-201ENST00000607706 736 ntBASIC2.15□□□□□ -2.07
APOEP02649 AC006213.5-201ENST00000619673 288 ntBASIC2.15□□□□□ -2.07
APOEP02649 AC010872.1-201ENST00000624225 675 ntBASIC2.15□□□□□ -2.07
APOEP02649 AC092881.1-201ENST00000638218 2733 ntBASIC2.15□□□□□ -2.07
APOEP02649 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
APOEP02649 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
APOEP02649 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
APOEP02649 RNU6-251P-201ENST00000363235 104 ntBASIC2.14□□□□□ -2.07
APOEP02649 RNU2-43P-201ENST00000410306 190 ntBASIC2.14□□□□□ -2.07
APOEP02649 NPM1P11-201ENST00000417106 855 ntBASIC2.14□□□□□ -2.07
APOEP02649 TAAR7P-201ENST00000436141 242 ntBASIC2.14□□□□□ -2.07
APOEP02649 DDX3P2-201ENST00000446138 111 ntBASIC2.14□□□□□ -2.07
APOEP02649 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.14□□□□□ -2.07
APOEP02649 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.14□□□□□ -2.07
APOEP02649 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.14□□□□□ -2.07
APOEP02649 SUMO2P6-201ENST00000505273 288 ntBASIC2.14□□□□□ -2.07
APOEP02649 NDUFB4P2-201ENST00000509515 391 ntBASIC2.14□□□□□ -2.07
APOEP02649 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC2.14□□□□□ -2.07
APOEP02649 RNU1-40P-201ENST00000516816 164 ntBASIC2.14□□□□□ -2.07
APOEP02649 RNU1-97P-201ENST00000516872 164 ntBASIC2.14□□□□□ -2.07
APOEP02649 RNA5SP364-201ENST00000516938 78 ntBASIC2.14□□□□□ -2.07
APOEP02649 ARL2BPP5-201ENST00000523141 481 ntBASIC2.14□□□□□ -2.07
APOEP02649 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.14□□□□□ -2.07
APOEP02649 CR383656.7-201ENST00000548164 174 ntBASIC2.14□□□□□ -2.07
APOEP02649 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC2.14□□□□□ -2.07
APOEP02649 MTCYBP27-201ENST00000555160 670 ntBASIC2.14□□□□□ -2.07
APOEP02649 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.14□□□□□ -2.07
APOEP02649 SULT1C2P1-202ENST00000562418 459 ntBASIC2.14□□□□□ -2.07
APOEP02649 AGGF1P5-201ENST00000567900 919 ntBASIC2.14□□□□□ -2.07
APOEP02649 AC005498.1-201ENST00000592125 465 ntBASIC2.14□□□□□ -2.07
APOEP02649 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC2.14□□□□□ -2.07
APOEP02649 uc_338.20-201ENST00000621563 178 ntBASIC2.14□□□□□ -2.07
APOEP02649 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.14□□□□□ -2.07
APOEP02649 AL356266.1-201ENST00000623311 483 ntBASIC2.14□□□□□ -2.07
APOEP02649 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.14□□□□□ -2.07
APOEP02649 OR4G11P-202ENST00000642116 1414 ntBASIC2.14□□□□□ -2.07
APOEP02649 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.14□□□□□ -2.07
APOEP02649 MTND4P35-201ENST00000604257 1375 ntBASIC2.13□□□□□ -2.07
APOEP02649 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
APOEP02649 SNORD56.4-201ENST00000363883 71 ntBASIC2.13□□□□□ -2.07
APOEP02649 RNA5SP160-201ENST00000364866 120 ntBASIC2.13□□□□□ -2.07
APOEP02649 AC083799.1-201ENST00000366451 910 ntBASIC2.13□□□□□ -2.07
APOEP02649 SNORD116-23-201ENST00000384645 92 ntBASIC2.13□□□□□ -2.07
APOEP02649 SNORA46.1-201ENST00000391069 153 ntBASIC2.13□□□□□ -2.07
APOEP02649 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.13□□□□□ -2.07
APOEP02649 AC098614.2-201ENST00000426040 255 ntBASIC2.13□□□□□ -2.07
APOEP02649 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC2.13□□□□□ -2.07
APOEP02649 AL512844.2-201ENST00000433990 593 ntBASIC2.13□□□□□ -2.07
APOEP02649 THAP5P1-201ENST00000439089 262 ntBASIC2.13□□□□□ -2.07
APOEP02649 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.13□□□□□ -2.07
APOEP02649 AC092757.1-201ENST00000467293 467 ntBASIC2.13□□□□□ -2.07
APOEP02649 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.13□□□□□ -2.07
APOEP02649 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.13□□□□□ -2.07
APOEP02649 AC048346.1-201ENST00000510247 144 ntBASIC2.13□□□□□ -2.07
APOEP02649 OR5AQ1P-201ENST00000527596 927 ntBASIC2.13□□□□□ -2.07
APOEP02649 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC2.13□□□□□ -2.07
APOEP02649 AC067805.1-201ENST00000559344 470 ntBASIC2.13□□□□□ -2.07
APOEP02649 MTCO1P40-201ENST00000574371 625 ntBASIC2.13□□□□□ -2.07
APOEP02649 AL031176.1-201ENST00000604554 466 ntBASIC2.13□□□□□ -2.07
APOEP02649 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
APOEP02649 AP003399.1-201ENST00000637534 361 ntBASIC2.13□□□□□ -2.07
APOEP02649 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
APOEP02649 HSPE1P11-201ENST00000339579 310 ntBASIC2.12□□□□□ -2.07
APOEP02649 OR56A5-201ENST00000340110 738 ntBASIC2.12□□□□□ -2.07
APOEP02649 RNU6-582P-201ENST00000362989 107 ntBASIC2.12□□□□□ -2.07
APOEP02649 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.12□□□□□ -2.07
APOEP02649 AL035405.1-201ENST00000400795 710 ntBASIC2.12□□□□□ -2.07
APOEP02649 RPS3AP24-201ENST00000407896 734 ntBASIC2.12□□□□□ -2.07
APOEP02649 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.12□□□□□ -2.07
APOEP02649 RNU4-26P-201ENST00000410270 107 ntBASIC2.12□□□□□ -2.07
APOEP02649 RNA5SP338-201ENST00000410495 85 ntBASIC2.12□□□□□ -2.07
APOEP02649 PSMA6P3-201ENST00000428242 164 ntBASIC2.12□□□□□ -2.07
APOEP02649 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
APOEP02649 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC2.12□□□□□ -2.07
APOEP02649 AL050341.1-201ENST00000447743 313 ntBASIC2.12□□□□□ -2.07
APOEP02649 AC097493.1-201ENST00000463958 372 ntBASIC2.12□□□□□ -2.07
APOEP02649 RNU6-885P-201ENST00000516607 104 ntBASIC2.12□□□□□ -2.07
APOEP02649 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC2.12□□□□□ -2.07
APOEP02649 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.12□□□□□ -2.07
APOEP02649 RANP3-201ENST00000530970 276 ntBASIC2.12□□□□□ -2.07
APOEP02649 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.12□□□□□ -2.07
APOEP02649 AC011611.5-201ENST00000552477 578 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms