Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 UBE2V1P12-201ENST00000503954 474 ntBASIC2.82□□□□□ -1.96
MBD3O95983 AC009901.1-201ENST00000506703 541 ntBASIC2.82□□□□□ -1.96
MBD3O95983 SLC25A15P5-201ENST00000508033 253 ntBASIC2.82□□□□□ -1.96
MBD3O95983 AC074250.1-201ENST00000511117 192 ntBASIC2.82□□□□□ -1.96
MBD3O95983 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.82□□□□□ -1.96
MBD3O95983 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC2.82□□□□□ -1.96
MBD3O95983 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC2.82□□□□□ -1.96
MBD3O95983 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.82□□□□□ -1.96
MBD3O95983 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.82□□□□□ -1.96
MBD3O95983 AC078814.3-201ENST00000553036 491 ntBASIC2.82□□□□□ -1.96
MBD3O95983 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.82□□□□□ -1.96
MBD3O95983 AC020895.1-201ENST00000595362 272 ntBASIC2.82□□□□□ -1.96
MBD3O95983 AC008739.3-201ENST00000603262 127 ntBASIC2.82□□□□□ -1.96
MBD3O95983 AL596327.1-201ENST00000603629 213 ntBASIC2.82□□□□□ -1.96
MBD3O95983 AL049779.4-201ENST00000604500 156 ntBASIC2.82□□□□□ -1.96
MBD3O95983 AC112220.3-201ENST00000605502 502 ntBASIC2.82□□□□□ -1.96
MBD3O95983 MIR92B-201ENST00000607575 96 ntBASIC2.82□□□□□ -1.96
MBD3O95983 AC106052.1-201ENST00000608029 497 ntBASIC2.82□□□□□ -1.96
MBD3O95983 AL157392.4-201ENST00000609756 345 ntBASIC2.82□□□□□ -1.96
MBD3O95983 AC097478.2-201ENST00000610572 514 ntBASIC2.82□□□□□ -1.96
MBD3O95983 AC008443.7-201ENST00000622195 246 ntBASIC2.82□□□□□ -1.96
MBD3O95983 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
MBD3O95983 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.82□□□□□ -1.96
MBD3O95983 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
MBD3O95983 AC005336.3-201ENST00000623833 2679 ntBASIC2.81□□□□□ -1.96
MBD3O95983 RPL21P132-201ENST00000331267 462 ntBASIC2.81□□□□□ -1.96
MBD3O95983 AL590084.2-201ENST00000401481 382 ntBASIC2.81□□□□□ -1.96
MBD3O95983 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC2.81□□□□□ -1.96
MBD3O95983 Z85995.1-201ENST00000415547 335 ntBASIC2.81□□□□□ -1.96
MBD3O95983 NANOGP5-201ENST00000424456 877 ntBASIC2.81□□□□□ -1.96
MBD3O95983 AC092047.1-201ENST00000424997 240 ntBASIC2.81□□□□□ -1.96
MBD3O95983 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC2.81□□□□□ -1.96
MBD3O95983 AL365496.1-201ENST00000426885 215 ntBASIC2.81□□□□□ -1.96
MBD3O95983 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC2.81□□□□□ -1.96
MBD3O95983 RPS25P9-201ENST00000435591 252 ntBASIC2.81□□□□□ -1.96
MBD3O95983 UBE2V1P13-201ENST00000436983 439 ntBASIC2.81□□□□□ -1.96
MBD3O95983 AL135938.1-201ENST00000443141 297 ntBASIC2.81□□□□□ -1.96
MBD3O95983 AL513328.1-201ENST00000446460 224 ntBASIC2.81□□□□□ -1.96
MBD3O95983 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
MBD3O95983 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.81□□□□□ -1.96
MBD3O95983 MEMO1P3-201ENST00000459811 302 ntBASIC2.81□□□□□ -1.96
MBD3O95983 RPL7P18-201ENST00000478965 734 ntBASIC2.81□□□□□ -1.96
MBD3O95983 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC2.81□□□□□ -1.96
MBD3O95983 AC010587.2-201ENST00000511727 448 ntBASIC2.81□□□□□ -1.96
MBD3O95983 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC2.81□□□□□ -1.96
MBD3O95983 RNA5SP341-201ENST00000516261 117 ntBASIC2.81□□□□□ -1.96
MBD3O95983 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.81□□□□□ -1.96
MBD3O95983 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC2.81□□□□□ -1.96
MBD3O95983 AC087373.1-201ENST00000524920 491 ntBASIC2.81□□□□□ -1.96
MBD3O95983 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.81□□□□□ -1.96
MBD3O95983 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.81□□□□□ -1.96
MBD3O95983 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.81□□□□□ -1.96
MBD3O95983 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC2.81□□□□□ -1.96
MBD3O95983 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC2.81□□□□□ -1.96
MBD3O95983 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC2.81□□□□□ -1.96
MBD3O95983 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.81□□□□□ -1.96
MBD3O95983 AC008739.2-201ENST00000597006 317 ntBASIC2.81□□□□□ -1.96
MBD3O95983 AL603758.1-201ENST00000618654 241 ntBASIC2.81□□□□□ -1.96
MBD3O95983 U4.3-201ENST00000621047 82 ntBASIC2.81□□□□□ -1.96
MBD3O95983 AC002064.3-201ENST00000623448 346 ntBASIC2.81□□□□□ -1.96
MBD3O95983 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
MBD3O95983 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
MBD3O95983 DDX10P1-201ENST00000448545 1933 ntBASIC2.81□□□□□ -1.96
MBD3O95983 AC007785.2-201ENST00000598627 1916 ntBASIC2.81□□□□□ -1.96
MBD3O95983 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
MBD3O95983 SNORD56.5-201ENST00000364281 72 ntBASIC2.8□□□□□ -1.96
MBD3O95983 RNU1-51P-201ENST00000365345 176 ntBASIC2.8□□□□□ -1.96
MBD3O95983 RNU6-744P-201ENST00000365557 107 ntBASIC2.8□□□□□ -1.96
MBD3O95983 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC2.8□□□□□ -1.96
MBD3O95983 RNU6-1316P-201ENST00000384242 108 ntBASIC2.8□□□□□ -1.96
MBD3O95983 RNU6-636P-201ENST00000384598 107 ntBASIC2.8□□□□□ -1.96
MBD3O95983 MIR7-3-201ENST00000384898 110 ntBASIC2.8□□□□□ -1.96
MBD3O95983 RN7SKP266-201ENST00000410232 287 ntBASIC2.8□□□□□ -1.96
MBD3O95983 RAP1BP1-201ENST00000412709 553 ntBASIC2.8□□□□□ -1.96
MBD3O95983 ELOCP9-201ENST00000418624 239 ntBASIC2.8□□□□□ -1.96
MBD3O95983 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC2.8□□□□□ -1.96
MBD3O95983 RPL7P37-201ENST00000425095 738 ntBASIC2.8□□□□□ -1.96
MBD3O95983 AC008850.1-201ENST00000427546 362 ntBASIC2.8□□□□□ -1.96
MBD3O95983 YME1L1P1-201ENST00000429435 297 ntBASIC2.8□□□□□ -1.96
MBD3O95983 AL714022.1-201ENST00000439897 151 ntBASIC2.8□□□□□ -1.96
MBD3O95983 PAXBP1P1-201ENST00000449315 447 ntBASIC2.8□□□□□ -1.96
MBD3O95983 ATG12P2-201ENST00000456830 416 ntBASIC2.8□□□□□ -1.96
MBD3O95983 RPS20P20-201ENST00000460498 340 ntBASIC2.8□□□□□ -1.96
MBD3O95983 AC116337.2-201ENST00000477662 156 ntBASIC2.8□□□□□ -1.96
MBD3O95983 AL135752.1-201ENST00000479477 471 ntBASIC2.8□□□□□ -1.96
MBD3O95983 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.8□□□□□ -1.96
MBD3O95983 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC2.8□□□□□ -1.96
MBD3O95983 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.8□□□□□ -1.96
MBD3O95983 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.8□□□□□ -1.96
MBD3O95983 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
MBD3O95983 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC2.8□□□□□ -1.96
MBD3O95983 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC2.8□□□□□ -1.96
MBD3O95983 AC007336.1-201ENST00000576365 3828 ntBASIC2.8□□□□□ -1.96
MBD3O95983 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.8□□□□□ -1.96
MBD3O95983 MIR4429-201ENST00000580105 73 ntBASIC2.8□□□□□ -1.96
MBD3O95983 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC2.8□□□□□ -1.96
MBD3O95983 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.8□□□□□ -1.96
MBD3O95983 AL161729.4-201ENST00000604650 476 ntBASIC2.8□□□□□ -1.96
MBD3O95983 AC067747.1-201ENST00000608026 250 ntBASIC2.8□□□□□ -1.96
MBD3O95983 AL133445.2-201ENST00000611191 527 ntBASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 132.7 ms