Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 AL606495.1-201ENST00000422100 813 ntBASIC2.53□□□□□ -2
PCF11O94913 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC2.53□□□□□ -2
PCF11O94913 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC2.53□□□□□ -2
PCF11O94913 HMGB1P47-201ENST00000511281 589 ntBASIC2.53□□□□□ -2
PCF11O94913 AC007375.1-201ENST00000554513 578 ntBASIC2.53□□□□□ -2
PCF11O94913 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.53□□□□□ -2
PCF11O94913 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC2.53□□□□□ -2
PCF11O94913 AC013444.2-201ENST00000603317 787 ntBASIC2.53□□□□□ -2
PCF11O94913 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
PCF11O94913 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
PCF11O94913 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.53□□□□□ -2
PCF11O94913 AC090740.1-201ENST00000623193 2262 ntBASIC2.53□□□□□ -2
PCF11O94913 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2.01
PCF11O94913 RNA5SP139-201ENST00000364340 117 ntBASIC2.53□□□□□ -2.01
PCF11O94913 RNA5SP489-201ENST00000410986 109 ntBASIC2.53□□□□□ -2.01
PCF11O94913 FO393419.3-201ENST00000428741 282 ntBASIC2.53□□□□□ -2.01
PCF11O94913 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.53□□□□□ -2.01
PCF11O94913 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC2.53□□□□□ -2.01
PCF11O94913 AL034418.1-201ENST00000448675 860 ntBASIC2.53□□□□□ -2.01
PCF11O94913 AC034222.1-201ENST00000494052 532 ntBASIC2.53□□□□□ -2.01
PCF11O94913 RPL21P131-201ENST00000497298 483 ntBASIC2.53□□□□□ -2.01
PCF11O94913 AC009901.1-201ENST00000506703 541 ntBASIC2.53□□□□□ -2.01
PCF11O94913 AC016065.2-201ENST00000514530 444 ntBASIC2.53□□□□□ -2.01
PCF11O94913 RNA5SP61-201ENST00000516453 100 ntBASIC2.53□□□□□ -2.01
PCF11O94913 AL161670.1-201ENST00000554348 137 ntBASIC2.53□□□□□ -2.01
PCF11O94913 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC2.53□□□□□ -2.01
PCF11O94913 AC091057.2-201ENST00000602594 792 ntBASIC2.53□□□□□ -2.01
PCF11O94913 AL355810.1-201ENST00000614629 552 ntBASIC2.53□□□□□ -2.01
PCF11O94913 AC018755.4-201ENST00000619715 454 ntBASIC2.53□□□□□ -2.01
PCF11O94913 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2.01
PCF11O94913 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
PCF11O94913 BX510359.4-201ENST00000423750 193 ntBASIC2.52□□□□□ -2.01
PCF11O94913 SLC44A3-AS1-205ENST00000424505 612 ntBASIC2.52□□□□□ -2.01
PCF11O94913 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC2.52□□□□□ -2.01
PCF11O94913 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC2.52□□□□□ -2.01
PCF11O94913 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC2.52□□□□□ -2.01
PCF11O94913 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC2.52□□□□□ -2.01
PCF11O94913 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC2.52□□□□□ -2.01
PCF11O94913 MIR4504-201ENST00000577413 92 ntBASIC2.52□□□□□ -2.01
PCF11O94913 MIR3618-201ENST00000580330 88 ntBASIC2.52□□□□□ -2.01
PCF11O94913 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2.52□□□□□ -2.01
PCF11O94913 AC008687.2-201ENST00000597865 520 ntBASIC2.52□□□□□ -2.01
PCF11O94913 HPVC1-201ENST00000629899 1198 ntBASIC2.52□□□□□ -2.01
PCF11O94913 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2.52□□□□□ -2.01
PCF11O94913 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
PCF11O94913 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.51□□□□□ -2.01
PCF11O94913 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
PCF11O94913 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
PCF11O94913 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.51□□□□□ -2.01
PCF11O94913 AC006548.1-201ENST00000427470 102 ntBASIC2.51□□□□□ -2.01
PCF11O94913 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
PCF11O94913 LSM1P1-201ENST00000438629 273 ntBASIC2.51□□□□□ -2.01
PCF11O94913 AC093767.1-201ENST00000504523 156 ntBASIC2.51□□□□□ -2.01
PCF11O94913 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.51□□□□□ -2.01
PCF11O94913 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.51□□□□□ -2.01
PCF11O94913 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.51□□□□□ -2.01
PCF11O94913 NBEAP1-201ENST00000554452 979 ntBASIC2.51□□□□□ -2.01
PCF11O94913 AC098679.5-201ENST00000624394 571 ntBASIC2.51□□□□□ -2.01
PCF11O94913 CR381572.1-201ENST00000625098 102 ntBASIC2.51□□□□□ -2.01
PCF11O94913 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.51□□□□□ -2.01
PCF11O94913 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC2.51□□□□□ -2.01
PCF11O94913 AC099654.7-201ENST00000635788 2127 ntBASIC2.51□□□□□ -2.01
PCF11O94913 RNU4-41P-201ENST00000364426 143 ntBASIC2.5□□□□□ -2.01
PCF11O94913 RNU6-98P-201ENST00000384173 107 ntBASIC2.5□□□□□ -2.01
PCF11O94913 RNU6-174P-201ENST00000410406 106 ntBASIC2.5□□□□□ -2.01
PCF11O94913 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.5□□□□□ -2.01
PCF11O94913 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC2.5□□□□□ -2.01
PCF11O94913 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
PCF11O94913 AL359273.1-201ENST00000510918 627 ntBASIC2.5□□□□□ -2.01
PCF11O94913 AC109471.1-201ENST00000511631 612 ntBASIC2.5□□□□□ -2.01
PCF11O94913 CIR1P1-201ENST00000524055 1133 ntBASIC2.5□□□□□ -2.01
PCF11O94913 OR10V3P-201ENST00000525712 725 ntBASIC2.5□□□□□ -2.01
PCF11O94913 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC2.5□□□□□ -2.01
PCF11O94913 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.5□□□□□ -2.01
PCF11O94913 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.5□□□□□ -2.01
PCF11O94913 STMN1P1-201ENST00000617809 440 ntBASIC2.5□□□□□ -2.01
PCF11O94913 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
PCF11O94913 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.5□□□□□ -2.01
PCF11O94913 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC2.5□□□□□ -2.01
PCF11O94913 AC138915.1-201ENST00000565427 1685 ntBASIC2.5□□□□□ -2.01
PCF11O94913 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
PCF11O94913 RNU1-109P-201ENST00000383960 147 ntBASIC2.49□□□□□ -2.01
PCF11O94913 MIR1303-201ENST00000408625 86 ntBASIC2.49□□□□□ -2.01
PCF11O94913 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.49□□□□□ -2.01
PCF11O94913 RPL7P29-201ENST00000437151 728 ntBASIC2.49□□□□□ -2.01
PCF11O94913 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC2.49□□□□□ -2.01
PCF11O94913 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC2.49□□□□□ -2.01
PCF11O94913 RN7SKP49-201ENST00000516675 260 ntBASIC2.49□□□□□ -2.01
PCF11O94913 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.49□□□□□ -2.01
PCF11O94913 SUMO2P14-201ENST00000604488 293 ntBASIC2.49□□□□□ -2.01
PCF11O94913 BNIP3P7-201ENST00000605641 516 ntBASIC2.49□□□□□ -2.01
PCF11O94913 AL158801.5-201ENST00000623123 465 ntBASIC2.49□□□□□ -2.01
PCF11O94913 ICE2P2-201ENST00000483823 2787 ntBASIC2.49□□□□□ -2.01
PCF11O94913 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.49□□□□□ -2.01
PCF11O94913 HSPE1P11-201ENST00000339579 310 ntBASIC2.49□□□□□ -2.01
PCF11O94913 SNORA1.3-201ENST00000384676 136 ntBASIC2.49□□□□□ -2.01
PCF11O94913 MCTS2P-201ENST00000394552 546 ntBASIC2.49□□□□□ -2.01
PCF11O94913 FO393413.1-201ENST00000402892 195 ntBASIC2.49□□□□□ -2.01
PCF11O94913 RNA5SP492-201ENST00000411330 114 ntBASIC2.49□□□□□ -2.01
PCF11O94913 HMGN2P30-201ENST00000423237 256 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms