Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 AC136443.5-201ENST00000603741 370 ntBASIC1.7□□□□□ -2.14
LTN1O94822 AC126118.1-201ENST00000607744 628 ntBASIC1.7□□□□□ -2.14
LTN1O94822 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.7□□□□□ -2.14
LTN1O94822 AL133216.2-202ENST00000634512 349 ntBASIC1.7□□□□□ -2.14
LTN1O94822 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC1.7□□□□□ -2.14
LTN1O94822 ZNF519P1-201ENST00000449011 1626 ntBASIC1.7□□□□□ -2.14
LTN1O94822 Y_RNA.374-201ENST00000365606 101 ntBASIC1.7□□□□□ -2.14
LTN1O94822 SLC9B1P2-201ENST00000398120 1184 ntBASIC1.7□□□□□ -2.14
LTN1O94822 AL138880.1-201ENST00000405824 642 ntBASIC1.7□□□□□ -2.14
LTN1O94822 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC1.7□□□□□ -2.14
LTN1O94822 RPS12P24-201ENST00000412619 387 ntBASIC1.7□□□□□ -2.14
LTN1O94822 AL035407.2-201ENST00000454090 378 ntBASIC1.7□□□□□ -2.14
LTN1O94822 AC008885.2-201ENST00000509506 930 ntBASIC1.7□□□□□ -2.14
LTN1O94822 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.7□□□□□ -2.14
LTN1O94822 MTATP6P3-201ENST00000581686 676 ntBASIC1.7□□□□□ -2.14
LTN1O94822 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC1.7□□□□□ -2.14
LTN1O94822 AC135178.6-201ENST00000605314 398 ntBASIC1.7□□□□□ -2.14
LTN1O94822 AL355816.1-201ENST00000607951 118 ntBASIC1.7□□□□□ -2.14
LTN1O94822 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.69□□□□□ -2.14
LTN1O94822 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC1.69□□□□□ -2.14
LTN1O94822 Y_RNA.36-201ENST00000362602 112 ntBASIC1.69□□□□□ -2.14
LTN1O94822 MED6P1-201ENST00000439659 713 ntBASIC1.69□□□□□ -2.14
LTN1O94822 RPS29P1-201ENST00000465274 159 ntBASIC1.69□□□□□ -2.14
LTN1O94822 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC1.69□□□□□ -2.14
LTN1O94822 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC1.69□□□□□ -2.14
LTN1O94822 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
LTN1O94822 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
LTN1O94822 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC1.69□□□□□ -2.14
LTN1O94822 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.69□□□□□ -2.14
LTN1O94822 CBX3P2-202ENST00000583365 535 ntBASIC1.69□□□□□ -2.14
LTN1O94822 AC008962.1-201ENST00000605729 304 ntBASIC1.69□□□□□ -2.14
LTN1O94822 AC008121.3-201ENST00000618726 433 ntBASIC1.69□□□□□ -2.14
LTN1O94822 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
LTN1O94822 MIR598-201ENST00000384868 97 ntBASIC1.68□□□□□ -2.14
LTN1O94822 AL033519.2-201ENST00000403958 392 ntBASIC1.68□□□□□ -2.14
LTN1O94822 RNA5SP233-201ENST00000459153 113 ntBASIC1.68□□□□□ -2.14
LTN1O94822 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.68□□□□□ -2.14
LTN1O94822 AC109635.4-202ENST00000531666 412 ntBASIC1.68□□□□□ -2.14
LTN1O94822 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.68□□□□□ -2.14
LTN1O94822 AL138880.2-201ENST00000616214 239 ntBASIC1.68□□□□□ -2.14
LTN1O94822 AL162373.1-201ENST00000620433 407 ntBASIC1.68□□□□□ -2.14
LTN1O94822 AC095038.3-201ENST00000634439 195 ntBASIC1.68□□□□□ -2.14
LTN1O94822 AP000560.1-201ENST00000624150 1937 ntBASIC1.68□□□□□ -2.14
LTN1O94822 SNORD23.1-201ENST00000408212 104 ntBASIC1.67□□□□□ -2.14
LTN1O94822 AC074117.2-201ENST00000417130 397 ntBASIC1.67□□□□□ -2.14
LTN1O94822 AC233728.2-201ENST00000425348 757 ntBASIC1.67□□□□□ -2.14
LTN1O94822 AC034222.1-201ENST00000494052 532 ntBASIC1.67□□□□□ -2.14
LTN1O94822 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC1.67□□□□□ -2.14
LTN1O94822 LDHBP3-201ENST00000514909 822 ntBASIC1.67□□□□□ -2.14
LTN1O94822 AP005660.1-201ENST00000522972 293 ntBASIC1.67□□□□□ -2.14
LTN1O94822 AC022690.1-201ENST00000526681 550 ntBASIC1.67□□□□□ -2.14
LTN1O94822 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC1.67□□□□□ -2.14
LTN1O94822 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC1.67□□□□□ -2.14
LTN1O94822 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.67□□□□□ -2.14
LTN1O94822 AC090897.2-201ENST00000581715 130 ntBASIC1.67□□□□□ -2.14
LTN1O94822 FAM106CP-201ENST00000582212 507 ntBASIC1.67□□□□□ -2.14
LTN1O94822 AC009090.3-201ENST00000616553 565 ntBASIC1.67□□□□□ -2.14
LTN1O94822 AP000648.3-201ENST00000623539 4507 ntBASIC1.67□□□□□ -2.14
LTN1O94822 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
LTN1O94822 RNU6-203P-201ENST00000384038 104 ntBASIC1.67□□□□□ -2.14
LTN1O94822 RPL31P63-201ENST00000422565 375 ntBASIC1.67□□□□□ -2.14
LTN1O94822 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC1.67□□□□□ -2.14
LTN1O94822 RNA5SP471-201ENST00000516971 106 ntBASIC1.67□□□□□ -2.14
LTN1O94822 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC1.67□□□□□ -2.14
LTN1O94822 AC013553.2-201ENST00000604244 589 ntBASIC1.67□□□□□ -2.14
LTN1O94822 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC1.67□□□□□ -2.14
LTN1O94822 AP003072.4-201ENST00000624580 310 ntBASIC1.67□□□□□ -2.14
LTN1O94822 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC1.67□□□□□ -2.14
LTN1O94822 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.66□□□□□ -2.14
LTN1O94822 CDC27P3-201ENST00000635418 1910 ntBASIC1.66□□□□□ -2.14
LTN1O94822 RNU6-1032P-201ENST00000384100 107 ntBASIC1.66□□□□□ -2.14
LTN1O94822 AL023807.1-201ENST00000407932 359 ntBASIC1.66□□□□□ -2.14
LTN1O94822 AC007098.1-201ENST00000420122 367 ntBASIC1.66□□□□□ -2.14
LTN1O94822 MTND5P25-201ENST00000430499 799 ntBASIC1.66□□□□□ -2.14
LTN1O94822 BMI1P1-201ENST00000445879 941 ntBASIC1.66□□□□□ -2.14
LTN1O94822 AC093801.2-201ENST00000503966 1050 ntBASIC1.66□□□□□ -2.14
LTN1O94822 AC008837.2-201ENST00000513076 418 ntBASIC1.66□□□□□ -2.14
LTN1O94822 CA1-215ENST00000522389 551 ntTSL 3 BASIC1.66□□□□□ -2.14
LTN1O94822 AC084364.2-201ENST00000546924 395 ntBASIC1.66□□□□□ -2.14
LTN1O94822 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC1.66□□□□□ -2.14
LTN1O94822 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.66□□□□□ -2.14
LTN1O94822 MIR6788-201ENST00000618842 66 ntBASIC1.66□□□□□ -2.14
LTN1O94822 AC145207.9-201ENST00000623802 325 ntBASIC1.66□□□□□ -2.14
LTN1O94822 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
LTN1O94822 MTCYBP7-201ENST00000419540 1134 ntBASIC1.65□□□□□ -2.14
LTN1O94822 TRAPPC2P4-201ENST00000421750 331 ntBASIC1.65□□□□□ -2.14
LTN1O94822 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC1.65□□□□□ -2.14
LTN1O94822 MTCO1P48-201ENST00000448024 1096 ntBASIC1.65□□□□□ -2.14
LTN1O94822 AC023790.1-201ENST00000482174 347 ntBASIC1.65□□□□□ -2.14
LTN1O94822 NCOR1P1-202ENST00000486162 291 ntBASIC1.65□□□□□ -2.14
LTN1O94822 AC090616.5-202ENST00000582111 297 ntBASIC1.65□□□□□ -2.14
LTN1O94822 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.65□□□□□ -2.14
LTN1O94822 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.65□□□□□ -2.15
LTN1O94822 RNU6-1072P-201ENST00000384703 107 ntBASIC1.64□□□□□ -2.15
LTN1O94822 RNU6-443P-201ENST00000384780 107 ntBASIC1.64□□□□□ -2.15
LTN1O94822 MIR548J-201ENST00000408833 112 ntBASIC1.64□□□□□ -2.15
LTN1O94822 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC1.64□□□□□ -2.15
LTN1O94822 CALM1P1-201ENST00000442082 433 ntBASIC1.64□□□□□ -2.15
LTN1O94822 HMGB1P26-201ENST00000452520 628 ntBASIC1.64□□□□□ -2.15
LTN1O94822 BZW1P2-201ENST00000473537 826 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms